Literature DB >> 31645730

The landscape of somatic mutation in normal colorectal epithelial cells.

Henry Lee-Six1, Sigurgeir Olafsson1, Peter Ellis1, Robert J Osborne1, Mathijs A Sanders1,2, Luiza Moore1, Nikitas Georgakopoulos3,4, Franco Torrente5, Ayesha Noorani6,7, Martin Goddard8, Philip Robinson1, Tim H H Coorens1, Laura O'Neill1, Christopher Alder1, Jingwei Wang1, Rebecca C Fitzgerald6,7, Matthias Zilbauer5,9, Nicholas Coleman7,10, Kourosh Saeb-Parsy3,4, Inigo Martincorena1, Peter J Campbell1, Michael R Stratton11.   

Abstract

The colorectal adenoma-carcinoma sequence has provided a paradigmatic framework for understanding the successive somatic genetic changes and consequent clonal expansions that lead to cancer1. However, our understanding of the earliest phases of colorectal neoplastic changes-which may occur in morphologically normal tissue-is comparatively limited, as for most cancer types. Here we use whole-genome sequencing to analyse hundreds of normal crypts from 42 individuals. Signatures of multiple mutational processes were revealed; some of these were ubiquitous and continuous, whereas others were only found in some individuals, in some crypts or during certain periods of life. Probable driver mutations were present in around 1% of normal colorectal crypts in middle-aged individuals, indicating that adenomas and carcinomas are rare outcomes of a pervasive process of neoplastic change across morphologically normal colorectal epithelium. Colorectal cancers exhibit substantially increased mutational burdens relative to normal cells. Sequencing normal colorectal cells provides quantitative insights into the genomic and clonal evolution of cancer.

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Year:  2019        PMID: 31645730     DOI: 10.1038/s41586-019-1672-7

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  155 in total

1.  A mutational signature that can be made by a bacterium arises in human colon cancer.

Authors:  Ye Yang; Christian Jobin
Journal:  Nature       Date:  2020-04       Impact factor: 49.962

2.  Mutational signature in colorectal cancer caused by genotoxic pks+ E. coli.

Authors:  Cayetano Pleguezuelos-Manzano; Jens Puschhof; Axel Rosendahl Huber; Arne van Hoeck; Henry M Wood; Jason Nomburg; Carino Gurjao; Freek Manders; Guillaume Dalmasso; Paul B Stege; Fernanda L Paganelli; Maarten H Geurts; Joep Beumer; Tomohiro Mizutani; Yi Miao; Reinier van der Linden; Stefan van der Elst; K Christopher Garcia; Janetta Top; Rob J L Willems; Marios Giannakis; Richard Bonnet; Phil Quirke; Matthew Meyerson; Edwin Cuppen; Ruben van Boxtel; Hans Clevers
Journal:  Nature       Date:  2020-02-27       Impact factor: 49.962

Review 3.  Genomic and phenotypic heterogeneity in prostate cancer.

Authors:  Michael C Haffner; Wilbert Zwart; Martine P Roudier; Lawrence D True; William G Nelson; Jonathan I Epstein; Angelo M De Marzo; Peter S Nelson; Srinivasan Yegnasubramanian
Journal:  Nat Rev Urol       Date:  2020-12-16       Impact factor: 14.432

4.  Genetic alterations and expression characteristics of ARID1A impact tumor immune contexture and survival in early-onset gastric cancer.

Authors:  Jun Zou; Wan Qin; Lin Yang; Lulu Wang; Yu Wang; Jianfeng Shen; Wei Xiong; Shiying Yu; Shumei Song; Jaffer A Ajani; Shiaw-Yih Lin; Gordon B Mills; Xianglin Yuan; Jianying Chen; Guang Peng
Journal:  Am J Cancer Res       Date:  2020-11-01       Impact factor: 6.166

5.  Embryonal precursors of Wilms tumor.

Authors:  Tim H H Coorens; Taryn D Treger; Reem Al-Saadi; Luiza Moore; Maxine G B Tran; Thomas J Mitchell; Suzanne Tugnait; Christine Thevanesan; Matthew D Young; Thomas R W Oliver; Minou Oostveen; Grace Collord; Patrick S Tarpey; Alex Cagan; Yvette Hooks; Mark Brougham; Ben C Reynolds; Giuseppe Barone; John Anderson; Mette Jorgensen; G A Amos Burke; Johannes Visser; James C Nicholson; Naima Smeulders; Imran Mushtaq; Grant D Stewart; Peter J Campbell; David C Wedge; Iñigo Martincorena; Dyanne Rampling; Liz Hook; Anne Y Warren; Nicholas Coleman; Tanzina Chowdhury; Neil Sebire; Jarno Drost; Kourosh Saeb-Parsy; Michael R Stratton; Karin Straathof; Kathy Pritchard-Jones; Sam Behjati
Journal:  Science       Date:  2019-12-06       Impact factor: 47.728

Review 6.  Clonal expansion in non-cancer tissues.

Authors:  Nobuyuki Kakiuchi; Seishi Ogawa
Journal:  Nat Rev Cancer       Date:  2021-02-24       Impact factor: 60.716

7.  Field Carcinogenesis in Cancer Evolution: What the Cell Is Going On?

Authors:  Ansam Sinjab; Guangchun Han; Linghua Wang; Humam Kadara
Journal:  Cancer Res       Date:  2020-10-06       Impact factor: 12.701

Review 8.  Molecular origins of APOBEC-associated mutations in cancer.

Authors:  Mia Petljak; John Maciejowski
Journal:  DNA Repair (Amst)       Date:  2020-07-06

Review 9.  A compendium of mutational cancer driver genes.

Authors:  Francisco Martínez-Jiménez; Ferran Muiños; Inés Sentís; Jordi Deu-Pons; Iker Reyes-Salazar; Claudia Arnedo-Pac; Loris Mularoni; Oriol Pich; Jose Bonet; Hanna Kranas; Abel Gonzalez-Perez; Nuria Lopez-Bigas
Journal:  Nat Rev Cancer       Date:  2020-08-10       Impact factor: 60.716

10.  Mathematical model of colorectal cancer initiation.

Authors:  Chay Paterson; Hans Clevers; Ivana Bozic
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-11       Impact factor: 11.205

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