Literature DB >> 32788368

Mathematical model of colorectal cancer initiation.

Chay Paterson1, Hans Clevers2,3,4, Ivana Bozic5.   

Abstract

Quantifying evolutionary dynamics of cancer initiation and progression can provide insights into more effective strategies of early detection and treatment. Here we develop a mathematical model of colorectal cancer initiation through inactivation of two tumor suppressor genes and activation of one oncogene, accounting for the well-known path to colorectal cancer through loss of tumor suppressors APC and TP53 and gain of the KRAS oncogene. In the model, we allow mutations to occur in any order, leading to a complex network of premalignant mutational genotypes on the way to colorectal cancer. We parameterize the model using experimentally measured parameter values, many of them only recently available, and compare its predictions to epidemiological data on colorectal cancer incidence. We find that the reported lifetime risk of colorectal cancer can be recovered using a mathematical model of colorectal cancer initiation together with experimentally measured mutation rates in colorectal tissues and proliferation rates of premalignant lesions. We demonstrate that the order of driver events in colorectal cancer is determined primarily by the fitness effects that they provide, rather than their mutation rates. Our results imply that there may not be significant immune suppression of untreated benign and malignant colorectal lesions.

Entities:  

Keywords:  cancer evolution; driver mutations; stochastic model

Mesh:

Substances:

Year:  2020        PMID: 32788368      PMCID: PMC7456111          DOI: 10.1073/pnas.2003771117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  60 in total

Review 1.  Molecular genetics of colorectal cancer.

Authors:  Eric R Fearon
Journal:  Annu Rev Pathol       Date:  2011       Impact factor: 23.472

Review 2.  A genetic model for colorectal tumorigenesis.

Authors:  E R Fearon; B Vogelstein
Journal:  Cell       Date:  1990-06-01       Impact factor: 41.582

3.  Pancreatic cancer: Pancreatic carcinogenesis - several small steps or one giant leap?

Authors:  Johannes G Reiter; Christine A Iacobuzio-Donahue
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2016-12-22       Impact factor: 46.802

4.  Impact of tumor progression on cancer incidence curves.

Authors:  E Georg Luebeck; Kit Curtius; Jihyoun Jeon; William D Hazelton
Journal:  Cancer Res       Date:  2012-10-10       Impact factor: 12.701

5.  The landscape of somatic mutation in normal colorectal epithelial cells.

Authors:  Henry Lee-Six; Sigurgeir Olafsson; Peter Ellis; Robert J Osborne; Mathijs A Sanders; Luiza Moore; Nikitas Georgakopoulos; Franco Torrente; Ayesha Noorani; Martin Goddard; Philip Robinson; Tim H H Coorens; Laura O'Neill; Christopher Alder; Jingwei Wang; Rebecca C Fitzgerald; Matthias Zilbauer; Nicholas Coleman; Kourosh Saeb-Parsy; Inigo Martincorena; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2019-10-23       Impact factor: 49.962

6.  Sequential cancer mutations in cultured human intestinal stem cells.

Authors:  Jarno Drost; Richard H van Jaarsveld; Bas Ponsioen; Cheryl Zimberlin; Ruben van Boxtel; Arjan Buijs; Norman Sachs; René M Overmeer; G Johan Offerhaus; Harry Begthel; Jeroen Korving; Marc van de Wetering; Gerald Schwank; Meike Logtenberg; Edwin Cuppen; Hugo J Snippert; Jan Paul Medema; Geert J P L Kops; Hans Clevers
Journal:  Nature       Date:  2015-04-29       Impact factor: 49.962

Review 7.  Cancer genome landscapes.

Authors:  Bert Vogelstein; Nickolas Papadopoulos; Victor E Velculescu; Shibin Zhou; Luis A Diaz; Kenneth W Kinzler
Journal:  Science       Date:  2013-03-29       Impact factor: 47.728

8.  Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor.

Authors:  Matthew R Janes; Jingchuan Zhang; Lian-Sheng Li; Rasmus Hansen; Ulf Peters; Xin Guo; Yuching Chen; Anjali Babbar; Sarah J Firdaus; Levan Darjania; Jun Feng; Jeffrey H Chen; Shuangwei Li; Shisheng Li; Yun O Long; Carol Thach; Yuan Liu; Ata Zarieh; Tess Ely; Jeff M Kucharski; Linda V Kessler; Tao Wu; Ke Yu; Yi Wang; Yvonne Yao; Xiaohu Deng; Patrick P Zarrinkar; Dirk Brehmer; Dashyant Dhanak; Matthew V Lorenzi; Dana Hu-Lowe; Matthew P Patricelli; Pingda Ren; Yi Liu
Journal:  Cell       Date:  2018-01-25       Impact factor: 41.582

9.  Genetic heterogeneity of the c-K-ras locus in colorectal adenomas but not in adenocarcinomas.

Authors:  D Shibata; J Schaeffer; Z H Li; G Capella; M Perucho
Journal:  J Natl Cancer Inst       Date:  1993-07-07       Impact factor: 13.506

10.  Mutations driving CLL and their evolution in progression and relapse.

Authors:  Dan A Landau; Eugen Tausch; Amaro N Taylor-Weiner; Chip Stewart; Johannes G Reiter; Jasmin Bahlo; Sandra Kluth; Ivana Bozic; Mike Lawrence; Sebastian Böttcher; Scott L Carter; Kristian Cibulskis; Daniel Mertens; Carrie L Sougnez; Mara Rosenberg; Julian M Hess; Jennifer Edelmann; Sabrina Kless; Michael Kneba; Matthias Ritgen; Anna Fink; Kirsten Fischer; Stacey Gabriel; Eric S Lander; Martin A Nowak; Hartmut Döhner; Michael Hallek; Donna Neuberg; Gad Getz; Stephan Stilgenbauer; Catherine J Wu
Journal:  Nature       Date:  2015-10-14       Impact factor: 49.962

View more
  7 in total

1.  A mechanistic mathematical model of initiation and malignant transformation in sporadic vestibular schwannoma.

Authors:  Chay Paterson; Ivana Bozic; Miriam J Smith; Xanthe Hoad; D Gareth R Evans
Journal:  Br J Cancer       Date:  2022-09-12       Impact factor: 9.075

2.  Aspirin's effect on kinetic parameters of cells contributes to its role in reducing incidence of advanced colorectal adenomas, shown by a multiscale computational study.

Authors:  Yifan Wang; C Richard Boland; Ajay Goel; Dominik Wodarz; Natalia L Komarova
Journal:  Elife       Date:  2022-04-13       Impact factor: 8.713

3.  Genome-wide analysis of mRNA and microRNA expression in colorectal cancer and adjacent normal mucosa.

Authors:  Mitsumasa Osakabe; Tamotsu Sugai; Yuma Ito; Takeshi Niinuma; Noriyuki Uesugi; Ryo Sugimoto; Naoki Yanagawa; Koki Otsuka; Akira Sasaki; Takayuki Matsumoto; Hiromu Suzuki
Journal:  J Pathol Clin Res       Date:  2022-03-14

4.  Modeling age-specific incidence of colon cancer via niche competition.

Authors:  Steffen Lange; Richard Mogwitz; Denis Hünniger; Anja Voß-Böhme
Journal:  PLoS Comput Biol       Date:  2022-08-19       Impact factor: 4.779

Review 5.  New Insights into Bile Acids Related Signaling Pathways in the Onset of Colorectal Cancer.

Authors:  Cristiana Caliceti; Angela Punzo; Alessia Silla; Patrizia Simoni; Giulia Roda; Silvana Hrelia
Journal:  Nutrients       Date:  2022-07-20       Impact factor: 6.706

Review 6.  Literature review of imaging, pathological diagnosis, and outcomes of metachronous lung and pancreatic metastasis of cecal cancer.

Authors:  Xiang Wu; Shuping Zhou; Xinhua Zhou; Xiao Xu; Luoluo Wang; Yi Ruan; Jun Lu; Haili Li; Hongfeng Xu; Xinyi Ma; Hong Li
Journal:  World J Surg Oncol       Date:  2022-10-17       Impact factor: 3.253

7.  Multiscale modeling of collective cell migration elucidates the mechanism underlying tumor-stromal interactions in different spatiotemporal scales.

Authors:  Zarifeh Heidary; Shaghayegh Haghjooy Javanmard; Iman Izadi; Nasrin Zare; Jafar Ghaisari
Journal:  Sci Rep       Date:  2022-09-28       Impact factor: 4.996

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.