Literature DB >> 31620549

Liver segmentation and metastases detection in MR images using convolutional neural networks.

Mariëlle J A Jansen1, Hugo J Kuijf1, Maarten Niekel2, Wouter B Veldhuis2, Frank J Wessels2, Max A Viergever1, Josien P W Pluim1.   

Abstract

Primary tumors have a high likelihood of developing metastases in the liver, and early detection of these metastases is crucial for patient outcome. We propose a method based on convolutional neural networks to detect liver metastases. First, the liver is automatically segmented using the six phases of abdominal dynamic contrast-enhanced (DCE) MR images. Next, DCE-MR and diffusion weighted MR images are used for metastases detection within the liver mask. The liver segmentations have a median Dice similarity coefficient of 0.95 compared with manual annotations. The metastases detection method has a sensitivity of 99.8% with a median of two false positives per image. The combination of the two MR sequences in a dual pathway network is proven valuable for the detection of liver metastases. In conclusion, a high quality liver segmentation can be obtained in which we can successfully detect liver metastases.
© 2019 Society of Photo-Optical Instrumentation Engineers (SPIE).

Entities:  

Keywords:  deep learning; detection; diffusion weighted MRI; dynamic contrast-enhanced MRI; liver; segmentation

Year:  2019        PMID: 31620549      PMCID: PMC6792006          DOI: 10.1117/1.JMI.6.4.044003

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  20 in total

1.  elastix: a toolbox for intensity-based medical image registration.

Authors:  Stefan Klein; Marius Staring; Keelin Murphy; Max A Viergever; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2009-11-17       Impact factor: 10.048

2.  Liver segmentation in MRI: A fully automatic method based on stochastic partitions.

Authors:  F López-Mir; V Naranjo; J Angulo; M Alcañiz; L Luna
Journal:  Comput Methods Programs Biomed       Date:  2014-01-16       Impact factor: 5.428

3.  Evaluation of motion correction for clinical dynamic contrast enhanced MRI of the liver.

Authors:  M J A Jansen; H J Kuijf; W B Veldhuis; F J Wessels; M S van Leeuwen; J P W Pluim
Journal:  Phys Med Biol       Date:  2017-09-12       Impact factor: 3.609

Review 4.  Liver metastases from colorectal cancer: how to best complement medical treatment with surgical approaches.

Authors:  Gianluca Masi; Lorenzo Fornaro; Chiara Caparello; Alfredo Falcone
Journal:  Future Oncol       Date:  2011-11       Impact factor: 3.404

5.  Diagnosis of liver metastases: can diffusion-weighted imaging (DWI) be used as a stand alone sequence?

Authors:  Christoph Kenis; Filip Deckers; Bert De Foer; François Van Mieghem; Steven Van Laere; Marc Pouillon
Journal:  Eur J Radiol       Date:  2011-03-04       Impact factor: 3.528

6.  Automatic detection and classification of hypodense hepatic lesions on contrast-enhanced venous-phase CT.

Authors:  Michel Bilello; Salih Burak Gokturk; Terry Desser; Sandy Napel; R Brooke Jeffrey; Christopher F Beaulieu
Journal:  Med Phys       Date:  2004-09       Impact factor: 4.071

Review 7.  MR imaging of hypervascular liver masses: a review of current techniques.

Authors:  Alvin C Silva; James M Evans; Ann E McCullough; Mashal A Jatoi; Hugo E Vargas; Amy K Hara
Journal:  Radiographics       Date:  2009 Mar-Apr       Impact factor: 5.333

8.  Diffusion-weighted MRI of metastatic liver lesions: is there a difference between hypervascular and hypovascular metastases?

Authors:  Christine Schmid-Tannwald; Stephen Thomas; Marko K Ivancevic; Farid Dahi; Carsten Rist; Ila Sethi; Aytekin Oto
Journal:  Acta Radiol       Date:  2013-08-28       Impact factor: 1.990

9.  Detection and classification of different liver lesions: comparison of Gd-EOB-DTPA-enhanced MRI versus multiphasic spiral CT in a clinical single centre investigation.

Authors:  Joachim Böttcher; Andreas Hansch; Alexander Pfeil; Peter Schmidt; Ansgar Malich; Albrecht Schneeweiss; Martin H Maurer; Florian Streitparth; Ulf K Teichgräber; Diane M Renz
Journal:  Eur J Radiol       Date:  2013-08-07       Impact factor: 3.528

10.  Interactive Medical Image Segmentation Using Deep Learning With Image-Specific Fine Tuning.

Authors:  Guotai Wang; Wenqi Li; Maria A Zuluaga; Rosalind Pratt; Premal A Patel; Michael Aertsen; Tom Doel; Anna L David; Jan Deprest; Sebastien Ourselin; Tom Vercauteren
Journal:  IEEE Trans Med Imaging       Date:  2018-07       Impact factor: 10.048

View more
  7 in total

1.  Improving automatic liver tumor segmentation in late-phase MRI using multi-model training and 3D convolutional neural networks.

Authors:  Annika Hänsch; Grzegorz Chlebus; Hans Meine; Felix Thielke; Farina Kock; Tobias Paulus; Nasreddin Abolmaali; Andrea Schenk
Journal:  Sci Rep       Date:  2022-07-18       Impact factor: 4.996

2.  An automated liver segmentation in liver iron concentration map using fuzzy c-means clustering combined with anatomical landmark data.

Authors:  Kittichai Wantanajittikul; Pairash Saiviroonporn; Suwit Saekho; Rungroj Krittayaphong; Vip Viprakasit
Journal:  BMC Med Imaging       Date:  2021-09-28       Impact factor: 1.930

3.  Artificial intelligence performance in detecting tumor metastasis from medical radiology imaging: A systematic review and meta-analysis.

Authors:  Qiuhan Zheng; Le Yang; Bin Zeng; Jiahao Li; Kaixin Guo; Yujie Liang; Guiqing Liao
Journal:  EClinicalMedicine       Date:  2020-12-25

4.  Patient-specific fine-tuning of convolutional neural networks for follow-up lesion quantification.

Authors:  Mariëlle J A Jansen; Hugo J Kuijf; Ashis K Dhara; Nick A Weaver; Geert Jan Biessels; Robin Strand; Josien P W Pluim
Journal:  J Med Imaging (Bellingham)       Date:  2020-12-17

Review 5.  Artificial intelligence in the diagnosis and management of colorectal cancer liver metastases.

Authors:  Gianluca Rompianesi; Francesca Pegoraro; Carlo Dl Ceresa; Roberto Montalti; Roberto Ivan Troisi
Journal:  World J Gastroenterol       Date:  2022-01-07       Impact factor: 5.742

6.  Improved performance and consistency of deep learning 3D liver segmentation with heterogeneous cancer stages in magnetic resonance imaging.

Authors:  Moritz Gross; Michael Spektor; Ariel Jaffe; Ahmet S Kucukkaya; Simon Iseke; Stefan P Haider; Mario Strazzabosco; Julius Chapiro; John A Onofrey
Journal:  PLoS One       Date:  2021-12-01       Impact factor: 3.240

Review 7.  Assessment of Liver Function With MRI: Where Do We Stand?

Authors:  Carolina Río Bártulos; Karin Senk; Mona Schumacher; Jan Plath; Nico Kaiser; Ragnar Bade; Jan Woetzel; Philipp Wiggermann
Journal:  Front Med (Lausanne)       Date:  2022-04-06
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.