Literature DB >> 31600675

High-resolution cryo-EM structures of TFIIH and their functional implications.

Eva Nogales1, Basil J Greber2.   

Abstract

Eukaryotic transcription factor IIH (TFIIH) is a 500 kDa-multiprotein complex that harbors two SF2-family DNA-dependent ATPase/helicase subunits and the kinase activity of Cyclin-dependent kinase 7. TFIIH serves as a general transcription factor for transcription initiation by eukaryotic RNA polymerase II and plays an important role in nucleotide excision DNA repair. Aiming to understand the molecular mechanisms of its function and regulation in two key cellular pathways, the high-resolution structure of TFIIH has been pursued for decades. Recent breakthroughs, largely enabled by methodological advances in cryo-electron microscopy, have finally revealed the structure of TFIIH and its interactions in the context of the Pol II-pre-initiation complex, and provide a first glimpse of a TFIIH-containing assembly in DNA repair. Here, we review and discuss these recent structural insights and their functional implications.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Year:  2019        PMID: 31600675      PMCID: PMC6951423          DOI: 10.1016/j.sbi.2019.08.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  54 in total

1.  A yeast four-hybrid system identifies Cdk-activating kinase as a regulator of the XPD helicase, a subunit of transcription factor IIH.

Authors:  B Sandrock; J M Egly
Journal:  J Biol Chem       Date:  2001-07-09       Impact factor: 5.157

2.  Structure of an RNA polymerase II preinitiation complex.

Authors:  Kenji Murakami; Kuang-Lei Tsai; Nir Kalisman; David A Bushnell; Francisco J Asturias; Roger D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-19       Impact factor: 11.205

3.  Double-stranded DNA translocase activity of transcription factor TFIIH and the mechanism of RNA polymerase II open complex formation.

Authors:  James Fishburn; Eric Tomko; Eric Galburt; Steven Hahn
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-16       Impact factor: 11.205

4.  Crystal structure of the Rad3/XPD regulatory domain of Ssl1/p44.

Authors:  Jin Seok Kim; Charlotte Saint-André; Hye Seong Lim; Cheol-Sang Hwang; Jean Marc Egly; Yunje Cho
Journal:  J Biol Chem       Date:  2015-02-13       Impact factor: 5.157

5.  Mechanism of DNA loading by the DNA repair helicase XPD.

Authors:  Diana Constantinescu-Aruxandei; Biljana Petrovic-Stojanovska; J Carlos Penedo; Malcolm F White; James H Naismith
Journal:  Nucleic Acids Res       Date:  2016-02-20       Impact factor: 16.971

6.  ARCH domain of XPD, an anchoring platform for CAK that conditions TFIIH DNA repair and transcription activities.

Authors:  Wassim Abdulrahman; Izarn Iltis; Laura Radu; Cathy Braun; Anne Maglott-Roth; Christophe Giraudon; Jean-Marc Egly; Arnaud Poterszman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

7.  Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II.

Authors:  R Drapkin; J T Reardon; A Ansari; J C Huang; L Zawel; K Ahn; A Sancar; D Reinberg
Journal:  Nature       Date:  1994-04-21       Impact factor: 49.962

8.  A new, tenth subunit of TFIIH is responsible for the DNA repair syndrome trichothiodystrophy group A.

Authors:  Giuseppina Giglia-Mari; Frederic Coin; Jeffrey A Ranish; Deborah Hoogstraten; Arjan Theil; Nils Wijgers; Nicolaas G J Jaspers; Anja Raams; Manuela Argentini; P J van der Spek; Elena Botta; Miria Stefanini; Jean-Marc Egly; Ruedi Aebersold; Jan H J Hoeijmakers; Wim Vermeulen
Journal:  Nat Genet       Date:  2004-06-27       Impact factor: 38.330

9.  DNA translocation mechanism of an XPD family helicase.

Authors:  Kaiying Cheng; Dale B Wigley
Journal:  Elife       Date:  2018-12-06       Impact factor: 8.140

10.  The cryo-electron microscopy structure of human transcription factor IIH.

Authors:  Basil J Greber; Thi Hoang Duong Nguyen; Jie Fang; Pavel V Afonine; Paul D Adams; Eva Nogales
Journal:  Nature       Date:  2017-09-13       Impact factor: 49.962

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  5 in total

1.  Ssl2/TFIIH function in transcription start site scanning by RNA polymerase II in Saccharomyces cerevisiae.

Authors:  Tingting Zhao; Irina O Vvedenskaya; William Km Lai; Shrabani Basu; B Franklin Pugh; Bryce E Nickels; Craig D Kaplan
Journal:  Elife       Date:  2021-10-15       Impact factor: 8.140

Review 2.  Envisioning how the prototypic molecular machine TFIIH functions in transcription initiation and DNA repair.

Authors:  Susan E Tsutakawa; Chi-Lin Tsai; Chunli Yan; Amer Bralić; Walter J Chazin; Samir M Hamdan; Orlando D Schärer; Ivaylo Ivanov; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2020-09-17

Review 3.  Structure and mechanism of the RNA polymerase II transcription machinery.

Authors:  Allison C Schier; Dylan J Taatjes
Journal:  Genes Dev       Date:  2020-04-01       Impact factor: 11.361

4.  The TFIIH complex is required to establish and maintain mitotic chromosome structure.

Authors:  Richard Chen; Wesley M Parker; Julian Haase; Mary Kate Bonner; Lisa M Jenkins; Alexander E Kelly
Journal:  Elife       Date:  2022-03-16       Impact factor: 8.140

Review 5.  Regulation of Eukaryotic RNAPs Activities by Phosphorylation.

Authors:  Araceli González-Jiménez; Adrián Campos; Francisco Navarro; Andrés Clemente-Blanco; Olga Calvo
Journal:  Front Mol Biosci       Date:  2021-06-25
  5 in total

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