Literature DB >> 23382212

ARCH domain of XPD, an anchoring platform for CAK that conditions TFIIH DNA repair and transcription activities.

Wassim Abdulrahman1, Izarn Iltis, Laura Radu, Cathy Braun, Anne Maglott-Roth, Christophe Giraudon, Jean-Marc Egly, Arnaud Poterszman.   

Abstract

The xeroderma pigmentosum group D (XPD) helicase is a subunit of transcription/DNA repair factor, transcription factor II H (TFIIH) that catalyzes the unwinding of a damaged DNA duplex during nucleotide excision repair. Apart from two canonical helicase domains, XPD is composed of a 4Fe-S cluster domain involved in DNA damage recognition and a module of uncharacterized function termed the "ARCH domain." By investigating the consequences of a mutation found in a patient with trichothiodystrophy, we show that the ARCH domain is critical for the recruitment of the cyclin-dependent kinase (CDK)-activating kinase (CAK) complex. Indeed, this mutation not only affects the interaction with the MAT1 CAK subunit, thereby decreasing the in vitro basal transcription activity of TFIIH itself and impeding the efficient recruitment of the transcription machinery on the promoter of an activated gene, but also impairs the DNA unwinding activity of XPD and the nucleotide excision repair activity of TFIIH. We further demonstrate the role of CAK in downregulating the XPD helicase activity within TFIIH. Taken together, our results identify the ARCH domain of XPD as a platform for the recruitment of CAK and as a potential molecular switch that might control TFIIH composition and play a key role in the conversion of TFIIH from a factor active in transcription to a factor involved in DNA repair.

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Year:  2013        PMID: 23382212      PMCID: PMC3581935          DOI: 10.1073/pnas.1213981110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

1.  A yeast four-hybrid system identifies Cdk-activating kinase as a regulator of the XPD helicase, a subunit of transcription factor IIH.

Authors:  B Sandrock; J M Egly
Journal:  J Biol Chem       Date:  2001-07-09       Impact factor: 5.157

2.  TFIIH contains a PH domain involved in DNA nucleotide excision repair.

Authors:  Virginie Gervais; Valérie Lamour; Anass Jawhari; Florent Frindel; Emeric Wasielewski; Sandy Dubaele; Jean-Marc Egly; Jean-Claude Thierry; Bruno Kieffer; Arnaud Poterszman
Journal:  Nat Struct Mol Biol       Date:  2004-06-13       Impact factor: 15.369

3.  Purification and interaction properties of the human RNA polymerase B(II) general transcription factor BTF2.

Authors:  M Gerard; L Fischer; V Moncollin; J M Chipoulet; P Chambon; J M Egly
Journal:  J Biol Chem       Date:  1991-11-05       Impact factor: 5.157

Review 4.  The xeroderma pigmentosum group D (XPD) gene: one gene, two functions, three diseases.

Authors:  A R Lehmann
Journal:  Genes Dev       Date:  2001-01-01       Impact factor: 11.361

5.  Selective regulation of vitamin D receptor-responsive genes by TFIIH.

Authors:  Pascal Drané; Emmanuel Compe; Philippe Catez; Pierre Chymkowitch; Jean-Marc Egly
Journal:  Mol Cell       Date:  2004-10-22       Impact factor: 17.970

6.  Trichothiodystrophy: sulfur-deficient brittle hair as a marker for a neuroectodermal symptom complex.

Authors:  V H Price; R B Odom; W H Ward; F T Jones
Journal:  Arch Dermatol       Date:  1980-12

7.  Xpd/Ercc2 regulates CAK activity and mitotic progression.

Authors:  Jian Chen; Stéphane Larochelle; Xiaoming Li; Beat Suter
Journal:  Nature       Date:  2003-07-10       Impact factor: 49.962

8.  A new, tenth subunit of TFIIH is responsible for the DNA repair syndrome trichothiodystrophy group A.

Authors:  Giuseppina Giglia-Mari; Frederic Coin; Jeffrey A Ranish; Deborah Hoogstraten; Arjan Theil; Nils Wijgers; Nicolaas G J Jaspers; Anja Raams; Manuela Argentini; P J van der Spek; Elena Botta; Miria Stefanini; Jean-Marc Egly; Ruedi Aebersold; Jan H J Hoeijmakers; Wim Vermeulen
Journal:  Nat Genet       Date:  2004-06-27       Impact factor: 38.330

9.  Basal transcription defect discriminates between xeroderma pigmentosum and trichothiodystrophy in XPD patients.

Authors:  Sandy Dubaele; Luca Proietti De Santis; Rachelle J Bienstock; Anne Keriel; Miria Stefanini; Bennett Van Houten; Jean-Marc Egly
Journal:  Mol Cell       Date:  2003-06       Impact factor: 17.970

10.  Mutation of lysine-48 to arginine in the yeast RAD3 protein abolishes its ATPase and DNA helicase activities but not the ability to bind ATP.

Authors:  P Sung; D Higgins; L Prakash; S Prakash
Journal:  EMBO J       Date:  1988-10       Impact factor: 11.598

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  35 in total

1.  Structure of an RNA polymerase II preinitiation complex.

Authors:  Kenji Murakami; Kuang-Lei Tsai; Nir Kalisman; David A Bushnell; Francisco J Asturias; Roger D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-19       Impact factor: 11.205

2.  Baculovirus expression: old dog, new tricks.

Authors:  Imre Berger; Arnaud Poterszman
Journal:  Bioengineered       Date:  2015       Impact factor: 3.269

3.  Plasmodium falciparum XPD translocates in 5' to 3' direction, is expressed throughout the blood stages, and interacts with p44.

Authors:  Leila Tajedin; Mohammed Tarique; Renu Tuteja
Journal:  Protoplasma       Date:  2015-02-24       Impact factor: 3.356

Review 4.  RecQ and Fe-S helicases have unique roles in DNA metabolism dictated by their unwinding directionality, substrate specificity, and protein interactions.

Authors:  Katrina N Estep; Robert M Brosh
Journal:  Biochem Soc Trans       Date:  2017-12-22       Impact factor: 5.407

5.  Function of Conserved Topological Regions within the Saccharomyces cerevisiae Basal Transcription Factor TFIIH.

Authors:  Linda Warfield; Jie Luo; Jeffrey Ranish; Steven Hahn
Journal:  Mol Cell Biol       Date:  2016-09-12       Impact factor: 4.272

Review 6.  High-resolution cryo-EM structures of TFIIH and their functional implications.

Authors:  Eva Nogales; Basil J Greber
Journal:  Curr Opin Struct Biol       Date:  2019-10-07       Impact factor: 6.809

7.  ERCC2 Helicase Domain Mutations Confer Nucleotide Excision Repair Deficiency and Drive Cisplatin Sensitivity in Muscle-Invasive Bladder Cancer.

Authors:  Qiang Li; Alexis W Damish; Zoë Frazier; David Liu; Elizaveta Reznichenko; Atanas Kamburov; Andrew Bell; Huiyong Zhao; Emmet J Jordan; S Paul Gao; Jennifer Ma; Philip H Abbosh; Joaquim Bellmunt; Elizabeth R Plimack; Jean-Bernard Lazaro; David B Solit; Dean Bajorin; Jonathan E Rosenberg; Alan D D'Andrea; Nadeem Riaz; Eliezer M Van Allen; Gopa Iyer; Kent W Mouw
Journal:  Clin Cancer Res       Date:  2018-07-06       Impact factor: 12.531

8.  Tripartite DNA Lesion Recognition and Verification by XPC, TFIIH, and XPA in Nucleotide Excision Repair.

Authors:  Chia-Lung Li; Filip M Golebiowski; Yuki Onishi; Nadine L Samara; Kaoru Sugasawa; Wei Yang
Journal:  Mol Cell       Date:  2015-09-17       Impact factor: 17.970

9.  Increased Oxidative Damage and Reduced DNA Repair Enzyme XPD Involvement in High Glucose-Mediated Enhancement of Levobupivacaine-Induced Neurotoxicity.

Authors:  ZhongJie Liu; Wei Zhao; QingGuo Zhang; LuYing Lai; Shan Jiang; Jing Zhang; ShiYuan Xu
Journal:  Neurochem Res       Date:  2015-08-12       Impact factor: 3.996

10.  Architecture of the Human and Yeast General Transcription and DNA Repair Factor TFIIH.

Authors:  Jie Luo; Peter Cimermancic; Shruthi Viswanath; Christopher C Ebmeier; Bong Kim; Marine Dehecq; Vishnu Raman; Charles H Greenberg; Riccardo Pellarin; Andrej Sali; Dylan J Taatjes; Steven Hahn; Jeff Ranish
Journal:  Mol Cell       Date:  2015-09-03       Impact factor: 17.970

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