Literature DB >> 31547394

The Origin and Early Evolution of Life: Prebiotic Chemistry.

Michele Fiore1.   

Abstract

Microfossil evidence indicates that cellular life on Earth emerged during the Paleoarchean era be-tween 3 [...].

Entities:  

Year:  2019        PMID: 31547394      PMCID: PMC6789705          DOI: 10.3390/life9030073

Source DB:  PubMed          Journal:  Life (Basel)        ISSN: 2075-1729


Microfossil evidence indicates that cellular life on Earth emerged during the Paleoarchean era be-tween 3.6 and 3.2 thousand million years ago (Gya) [1]. But what is really what we call life? How, where, and when did life arise on our planet? These questions have remained most-fascinating over the last hundred years. The German biologist Carl Richard Woese emphasized the urgency of conducting in-depth studies in search of what in the early days of the formation of the universe and then of our planet, gave rise to what is called Life and he wrote “Biology today is no more fully understood in principle than physics was a century or so ago. In both cases the guiding vision has (or had) reached its end, and in both, a new, deeper, more invigorating representation of reality is (or was) called for.” [2] From the beginning of the last century, and in accord with what David Deamer highlighted “Life can emerge where physics and chemistry intersect” and for this reason the study of the origin of Life intersect not only the organic and inorganic chemistry but also biology, astrophysics, geochemistry, geophysics, planetology, earth science, bioinformatics, complexity theory, mathematics and philosophy from the equation. From an evolutionary chemical point of view, is possible to presume that life emerged from a mixture of inanimate matter: Organic and inorganic compounds. Such compounds reacted under favorable conditions, forming molecules that are commonly called “biotic” and that, thanks to a kind of self-organization, gave rise to the first biopolymers and to proto-metabolisms. The geology and the chemistry of Earth before the advent of life was completely different from what we know today. At that time, sunlight, volcanic heat, and hydrothermal sites were the main energy sources that could drive the synthesis of many molecules, including nucleosides, peptides, sugars and amphiphilic compounds. The atmosphere was mostly nitrogen (N2), as today, with a substantial amount of carbon dioxide (CO2) and much smaller amounts of carbon monoxide, ammonia, and methane (CO, NH3, CH4). It is also likely that water, present in locally limited amounts, contained hydrogen cyanide (HCN), formaldehyde (HCHO) and formamide (HCONH2). Intriguingly, those molecules are found in the interstellar space together with many other that can be considered as building blocks for the assembling of biomolecules such as water (H2O), formic acid (HCOOH), methanol (CH3OH) cyanamide (NH2CN), acetic acid (CH3COOH), acetamide (CH3CONH2), ethylene glycol (HOCH2CH2OH) and glycine [3,4]. Prebiotic chemistry experiences showed that the chemical combinations of different building blocks can give rise to the formations of different classes of biotic molecules such as 2’,3’-cyclic pyrimidine nucleotides, various–amino acids and glycerol phosphate [5,6,7,8,9,10,11]. The plausible scenarios for the assembling of these building blocks thus of such complex biomolecules are depicted as two: Hydrothermal vents and hydrothermal pools. Hydrothermal vents are systems whose heat source is the underlying magma or hot water generated by convection currents due to high thermal gradients [12]. The alternatives to hydrothermal vents are hydrothermal fields known also as hydrothermal pools. Recently, Damer and Deamer pointed out that fluctuating hydrothermal pools (FHPs) could be considered as plausibly prebiotic reactors for the synthesis of several key molecules for the development of life, including lipids, nucleic acids and peptides [13]. This short résumé is to say that the seventeen papers published in this special issue perfectly matches with the aim of the study of the origin of Life from a system chemistry and prebiotic chemistry perspective. We expect that this collection of original articles and reviews will provide the reader with an updated view of some important aspects of prebiotic chemistry thought. We hope that in the further investigations on the origin of Life will bring scientist to combine prebiotic chemistry and system chemistry in order to develop new strategies for the best understanding of how life emerged on planet based on the use of protocells models that can encapsulate sort of primitive metabolisms [14,15].
  14 in total

1.  Submarine hot springs and the origin of life.

Authors:  S L Miller; J L Bada
Journal:  Nature       Date:  1988-08-18       Impact factor: 49.962

Review 2.  A new biology for a new century.

Authors:  Carl R Woese
Journal:  Microbiol Mol Biol Rev       Date:  2004-06       Impact factor: 11.056

Review 3.  Earth's earliest atmospheres.

Authors:  Kevin Zahnle; Laura Schaefer; Bruce Fegley
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-23       Impact factor: 10.005

4.  Giant vesicles from rehydrated crude mixtures containing unexpected mixtures of amphiphiles formed under plausibly prebiotic conditions.

Authors:  Michele Fiore; Warren Madanamoothoo; Alexandra Berlioz-Barbier; Ofelia Maniti; Agnès Girard-Egrot; René Buchet; Peter Strazewski
Journal:  Org Biomol Chem       Date:  2017-05-16       Impact factor: 3.876

5.  Glass Microsphere-Supported Giant Vesicles for the Observation of Self-Reproduction of Lipid Boundaries.

Authors:  Michele Fiore; Ofelia Maniti; Agnes Girard-Egrot; Pierre-Alain Monnard; Peter Strazewski
Journal:  Angew Chem Int Ed Engl       Date:  2017-12-05       Impact factor: 15.336

6.  Common origins of RNA, protein and lipid precursors in a cyanosulfidic protometabolism.

Authors:  Bhavesh H Patel; Claudia Percivalle; Dougal J Ritson; Colm D Duffy; John D Sutherland
Journal:  Nat Chem       Date:  2015-03-16       Impact factor: 24.427

7.  Coupled phases and combinatorial selection in fluctuating hydrothermal pools: a scenario to guide experimental approaches to the origin of cellular life.

Authors:  Bruce Damer; David Deamer
Journal:  Life (Basel)       Date:  2015-03-13

8.  Prebiotic chemistry: geochemical context and reaction screening.

Authors:  Henderson James Cleaves
Journal:  Life (Basel)       Date:  2013-04-29

Review 9.  Prebiotic Lipidic Amphiphiles and Condensing Agents on the Early Earth.

Authors:  Michele Fiore; Peter Strazewski
Journal:  Life (Basel)       Date:  2016-03-28

Review 10.  Investigating Prebiotic Protocells for A Comprehensive Understanding of the Origins of Life: A Prebiotic Systems Chemistry Perspective.

Authors:  Augustin Lopez; Michele Fiore
Journal:  Life (Basel)       Date:  2019-06-07
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  1 in total

Review 1.  Prebiotic Chemistry: The Role of Trimetaphosphate in Prebiotic Chemical Evolution.

Authors:  Dingwei Gan; Jianxi Ying; Yufen Zhao
Journal:  Front Chem       Date:  2022-07-13       Impact factor: 5.545

  1 in total

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