Literature DB >> 31531820

Optimization Framework for Patient-Specific Cardiac Modeling.

Joshua Mineroff1, Andrew D McCulloch2, David Krummen3, Baskar Ganapathysubramanian1, Adarsh Krishnamurthy4.   

Abstract

PURPOSE: Patient-specific models of the heart can be used to improve the diagnosis of cardiac diseases, but practical application of these models can be impeded by the computational costs and numerical uncertainties of fitting mechanistic models to clinical measurements from individual patients. Reliable and efficient tuning of these models within clinically appropriate error bounds is a requirement for practical deployment in the time-constrained environment of the clinic.
METHODS: We developed an optimization framework to tune parameters of patient-specific mechanistic models using routinely-acquired non-invasive patient data more efficiently than manual methods. We employ a hybrid particle swarm and pattern search optimization algorithm, but the framework can be readily adapted to use other optimization algorithms.
RESULTS: We apply the proposed framework to tune full-cycle lumped parameter circulatory models using clinical data. We show that our framework can be easily adapted to optimize cross-species models by tuning the parameters of the same circulation model to four canine subjects.
CONCLUSIONS: This work will facilitate the use of biomechanics and circulatory cardiac models in both clinical and research environments by ameliorating the tedious process of manually fitting the parameters.

Entities:  

Keywords:  Cardiac biomechanics; Lumped-parameter circulation model; Optimization; Patient-specific modeling

Mesh:

Year:  2019        PMID: 31531820      PMCID: PMC6868335          DOI: 10.1007/s13239-019-00428-z

Source DB:  PubMed          Journal:  Cardiovasc Eng Technol        ISSN: 1869-408X            Impact factor:   2.495


  31 in total

1.  Special Report: The 1996 Guide for the Care and Use of Laboratory Animals.

Authors:  J. Derrell Clark; Gerald F. Gebhart; Janet C. Gonder; Michale E. Keeling; Dennis F. Kohn
Journal:  ILAR J       Date:  1997

2.  Normal range of human left ventricular volumes and mass using steady state free precession MRI in the radial long axis orientation.

Authors:  Sarah Clay; Khaled Alfakih; Aleksandra Radjenovic; Timothy Jones; John P Ridgway; Mohan U Sinvananthan
Journal:  MAGMA       Date:  2006-02-14       Impact factor: 2.310

3.  A meta-analysis of cardiac electrophysiology computational models.

Authors:  S A Niederer; M Fink; D Noble; N P Smith
Journal:  Exp Physiol       Date:  2009-01-12       Impact factor: 2.969

4.  The Living Heart Project: A robust and integrative simulator for human heart function.

Authors:  Brian Baillargeon; Nuno Rebelo; David D Fox; Robert L Taylor; Ellen Kuhl
Journal:  Eur J Mech A Solids       Date:  2014-11       Impact factor: 4.220

5.  Modelling passive diastolic mechanics with quantitative MRI of cardiac structure and function.

Authors:  Vicky Y Wang; H I Lam; Daniel B Ennis; Brett R Cowan; Alistair A Young; Martyn P Nash
Journal:  Med Image Anal       Date:  2009-07-16       Impact factor: 8.545

6.  Estimation of tissue contractility from cardiac cine-MRI using a biomechanical heart model.

Authors:  R Chabiniok; P Moireau; P-F Lesault; A Rahmouni; J-F Deux; D Chapelle
Journal:  Biomech Model Mechanobiol       Date:  2011-07-28

7.  Fast parameter calibration of a cardiac electromechanical model from medical images based on the unscented transform.

Authors:  Stéphanie Marchesseau; Hervé Delingette; Maxime Sermesant; Nicholas Ayache
Journal:  Biomech Model Mechanobiol       Date:  2012-10-12

8.  Patient-specific modeling of left ventricular electromechanics as a driver for haemodynamic analysis.

Authors:  Christoph M Augustin; Andrew Crozier; Aurel Neic; Anton J Prassl; Elias Karabelas; Tiago Ferreira da Silva; Joao F Fernandes; Fernando Campos; Titus Kuehne; Gernot Plank
Journal:  Europace       Date:  2016-12       Impact factor: 5.214

9.  Patient-Specific Models of Cardiac Biomechanics.

Authors:  Adarsh Krishnamurthy; Christopher T Villongco; Joyce Chuang; Lawrence R Frank; Vishal Nigam; Ernest Belezzuoli; Paul Stark; David E Krummen; Sanjiv Narayan; Jeffrey H Omens; Andrew D McCulloch; Roy Cp Kerckhoffs
Journal:  J Comput Phys       Date:  2013-07-01       Impact factor: 3.553

10.  The estimation of patient-specific cardiac diastolic functions from clinical measurements.

Authors:  Jiahe Xi; Pablo Lamata; Steven Niederer; Sander Land; Wenzhe Shi; Xiahai Zhuang; Sebastien Ourselin; Simon G Duckett; Anoop K Shetty; C Aldo Rinaldi; Daniel Rueckert; Reza Razavi; Nic P Smith
Journal:  Med Image Anal       Date:  2012-10-16       Impact factor: 8.545

View more
  3 in total

1.  Parameter subset reduction for patient-specific modelling of arrhythmogenic cardiomyopathy-related mutation carriers in the CircAdapt model.

Authors:  Nick van Osta; Aurore Lyon; Feddo Kirkels; Tijmen Koopsen; Tim van Loon; Maarten J Cramer; Arco J Teske; Tammo Delhaas; Wouter Huberts; Joost Lumens
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-05-25       Impact factor: 4.226

2.  Creation and application of virtual patient cohorts of heart models.

Authors:  S A Niederer; Y Aboelkassem; C D Cantwell; C Corrado; S Coveney; E M Cherry; T Delhaas; F H Fenton; A V Panfilov; P Pathmanathan; G Plank; M Riabiz; C H Roney; R W Dos Santos; L Wang
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-05-25       Impact factor: 4.226

3.  Fast Posterior Estimation of Cardiac Electrophysiological Model Parameters via Bayesian Active Learning.

Authors:  Md Shakil Zaman; Jwala Dhamala; Pradeep Bajracharya; John L Sapp; B Milan Horácek; Katherine C Wu; Natalia A Trayanova; Linwei Wang
Journal:  Front Physiol       Date:  2021-10-25       Impact factor: 4.566

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.