Literature DB >> 25267880

The Living Heart Project: A robust and integrative simulator for human heart function.

Brian Baillargeon1, Nuno Rebelo1, David D Fox2, Robert L Taylor3, Ellen Kuhl4.   

Abstract

The heart is not only our most vital, but also our most complex organ: Precisely controlled by the interplay of electrical and mechanical fields, it consists of four chambers and four valves, which act in concert to regulate its filling, ejection, and overall pump function. While numerous computational models exist to study either the electrical or the mechanical response of its individual chambers, the integrative electro-mechanical response of the whole heart remains poorly understood. Here we present a proof-of-concept simulator for a four-chamber human heart model created from computer topography and magnetic resonance images. We illustrate the governing equations of excitation-contraction coupling and discretize them using a single, unified finite element environment. To illustrate the basic features of our model, we visualize the electrical potential and the mechanical deformation across the human heart throughout its cardiac cycle. To compare our simulation against common metrics of cardiac function, we extract the pressure-volume relationship and show that it agrees well with clinical observations. Our prototype model allows us to explore and understand the key features, physics, and technologies to create an integrative, predictive model of the living human heart. Ultimately, our simulator will open opportunities to probe landscapes of clinical parameters, and guide device design and treatment planning in cardiac diseases such as stenosis, regurgitation, or prolapse of the aortic, pulmonary, tricuspid, or mitral valve.

Entities:  

Keywords:  Abaqus; Cardiac mechanics; Electro-mechanics; Excitation-contraction; Finite element analysis

Year:  2014        PMID: 25267880      PMCID: PMC4175454          DOI: 10.1016/j.euromechsol.2014.04.001

Source DB:  PubMed          Journal:  Eur J Mech A Solids        ISSN: 0997-7538            Impact factor:   4.220


  28 in total

1.  A three-dimensional computational analysis of fluid-structure interaction in the aortic valve.

Authors:  J De Hart; G W M Peters; P J G Schreurs; F P T Baaijens
Journal:  J Biomech       Date:  2003-01       Impact factor: 2.712

Review 2.  Modeling total heart function.

Authors:  Peter J Hunter; Andrew J Pullan; Bruce H Smaill
Journal:  Annu Rev Biomed Eng       Date:  2003       Impact factor: 9.590

3.  Heart disease and stroke statistics--2014 update: a report from the American Heart Association.

Authors:  Alan S Go; Dariush Mozaffarian; Véronique L Roger; Emelia J Benjamin; Jarett D Berry; Michael J Blaha; Shifan Dai; Earl S Ford; Caroline S Fox; Sheila Franco; Heather J Fullerton; Cathleen Gillespie; Susan M Hailpern; John A Heit; Virginia J Howard; Mark D Huffman; Suzanne E Judd; Brett M Kissela; Steven J Kittner; Daniel T Lackland; Judith H Lichtman; Lynda D Lisabeth; Rachel H Mackey; David J Magid; Gregory M Marcus; Ariane Marelli; David B Matchar; Darren K McGuire; Emile R Mohler; Claudia S Moy; Michael E Mussolino; Robert W Neumar; Graham Nichol; Dilip K Pandey; Nina P Paynter; Matthew J Reeves; Paul D Sorlie; Joel Stein; Amytis Towfighi; Tanya N Turan; Salim S Virani; Nathan D Wong; Daniel Woo; Melanie B Turner
Journal:  Circulation       Date:  2013-12-18       Impact factor: 29.690

4.  A fully implicit finite element method for bidomain models of cardiac electrophysiology.

Authors:  Hüsnü Dal; Serdar Göktepe; Michael Kaliske; Ellen Kuhl
Journal:  Comput Methods Biomech Biomed Engin       Date:  2011-05-24       Impact factor: 1.763

5.  Computational modeling of chemo-electro-mechanical coupling: a novel implicit monolithic finite element approach.

Authors:  J Wong; S Göktepe; E Kuhl
Journal:  Int J Numer Method Biomed Eng       Date:  2013-06-24       Impact factor: 2.747

Review 6.  Whole-heart modeling: applications to cardiac electrophysiology and electromechanics.

Authors:  Natalia A Trayanova
Journal:  Circ Res       Date:  2011-01-07       Impact factor: 17.367

7.  Active contraction of cardiac muscle: in vivo characterization of mechanical activation sequences in the beating heart.

Authors:  Alkiviadis Tsamis; Wolfgang Bothe; John-Peder Escobar Kvitting; Julia C Swanson; D Craig Miller; Ellen Kuhl
Journal:  J Mech Behav Biomed Mater       Date:  2011-04-07

8.  Generating fibre orientation maps in human heart models using Poisson interpolation.

Authors:  Jonathan Wong; Ellen Kuhl
Journal:  Comput Methods Biomech Biomed Engin       Date:  2012-12-05       Impact factor: 1.763

9.  Modeling the dispersion in electromechanically coupled myocardium.

Authors:  Thomas S E Eriksson; Anton J Prassl; Gernot Plank; Gerhard A Holzapfel
Journal:  Int J Numer Method Biomed Eng       Date:  2013-07-19       Impact factor: 2.747

10.  Numerical quadrature and operator splitting in finite element methods for cardiac electrophysiology.

Authors:  Shankarjee Krishnamoorthi; Mainak Sarkar; William S Klug
Journal:  Int J Numer Method Biomed Eng       Date:  2013-07-19       Impact factor: 2.747

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  71 in total

1.  Commentary on the integration of model sharing and reproducibility analysis to scholarly publishing workflow in computational biomechanics.

Authors:  Ahmet Erdemir; Trent M Guess; Jason P Halloran; Luca Modenese; Jeffrey A Reinbolt; Darryl G Thelen; Brian R Umberger; Ahmet Erdemir; Trent M Guess; Jason P Halloran; Luca Modenese; Jeffrey A Reinbolt; Darryl G Thelen; Brian R Umberger; Brian R Umberger; Ahmet Erdemir; Darryl G Thelen; Trent M Guess; Jeffrey A Reinbolt; Luca Modenese; Jason P Halloran
Journal:  IEEE Trans Biomed Eng       Date:  2016-10       Impact factor: 4.538

2.  Patient-Specific Airway Wall Remodeling in Chronic Lung Disease.

Authors:  Mona Eskandari; Ware G Kuschner; Ellen Kuhl
Journal:  Ann Biomed Eng       Date:  2015-03-28       Impact factor: 3.934

3.  Optimization Framework for Patient-Specific Cardiac Modeling.

Authors:  Joshua Mineroff; Andrew D McCulloch; David Krummen; Baskar Ganapathysubramanian; Adarsh Krishnamurthy
Journal:  Cardiovasc Eng Technol       Date:  2019-09-17       Impact factor: 2.495

4.  Quantification of uncertainty in the assessment of coronary plaque in CCTA through a dynamic cardiac phantom and 3D-printed plaque model.

Authors:  Taylor Richards; Gregory M Sturgeon; Juan Carlos Ramirez-Giraldo; Geoffrey D Rubin; Lynne Hurwitz Koweek; William Paul Segars; Ehsan Samei
Journal:  J Med Imaging (Bellingham)       Date:  2018-01-17

5.  Multiresolution spatiotemporal mechanical model of the heart as a prior to constrain the solution for 4D models of the heart.

Authors:  Grant T Gullberg; Alexander I Veress; Uttam M Shrestha; Jing Liu; Karen Ordovas; W Paul Segars; Youngho Seo
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2019-05-28

6.  Predicting critical drug concentrations and torsadogenic risk using a multiscale exposure-response simulator.

Authors:  Francisco Sahli Costabal; Jiang Yao; Anna Sher; Ellen Kuhl
Journal:  Prog Biophys Mol Biol       Date:  2018-10-26       Impact factor: 3.667

7.  Numerical evaluation of transcatheter aortic valve performance during heart beating and its post-deployment fluid-structure interaction analysis.

Authors:  Ram P Ghosh; Gil Marom; Matteo Bianchi; Karl D'souza; Wojtek Zietak; Danny Bluestein
Journal:  Biomech Model Mechanobiol       Date:  2020-02-24

8.  Generating Purkinje networks in the human heart.

Authors:  Francisco Sahli Costabal; Daniel E Hurtado; Ellen Kuhl
Journal:  J Biomech       Date:  2015-12-22       Impact factor: 2.712

9.  Computational Modeling of Healthy Myocardium in Diastole.

Authors:  Amir Nikou; Shauna M Dorsey; Jeremy R McGarvey; Joseph H Gorman; Jason A Burdick; James J Pilla; Robert C Gorman; Jonathan F Wenk
Journal:  Ann Biomed Eng       Date:  2015-07-28       Impact factor: 3.934

10.  Distribution of normal human left ventricular myofiber stress at end diastole and end systole: a target for in silico design of heart failure treatments.

Authors:  Martin Genet; Lik Chuan Lee; Rebecca Nguyen; Henrik Haraldsson; Gabriel Acevedo-Bolton; Zhihong Zhang; Liang Ge; Karen Ordovas; Sebastian Kozerke; Julius M Guccione
Journal:  J Appl Physiol (1985)       Date:  2014-05-29
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