Literature DB >> 31508509

Genome-scale CRISPR knockout screen identifies TIGAR as a modifier of PARP inhibitor sensitivity.

Pingping Fang1,2, Cristabelle De Souza2,3, Kay Minn2,4, Jeremy Chien3,5.   

Abstract

Treatment of cancer with poly (ADP-ribose) polymerase (PARP) inhibitors is currently limited to cells defective in the homologous recombination (HR) pathway. Identification of genetic targets that induce or mimic HR deficiencies will extend the clinical utility of PARP inhibitors. Here we perform a CRISPR/Cas9-based genome-scale loss-of-function screen, using the sensitivity of PARP inhibitor olaparib as a surrogate. We identify C12orf5, encoding TP53 induced glycolysis and apoptosis regulator (TIGAR), as a modifier of PARP inhibitor response. We show that TIGAR is amplified in several cancer types, and higher expression of TIGAR associates with poor overall survival in ovarian cancer. TIGAR knockdown enhances sensitivity to olaparib in cancer cells via downregulation of BRCA1 and the Fanconi anemia pathway and increases senescence of these cells by affecting metabolic pathways and increasing the cytotoxic effects of olaparib. Our results indicate TIGAR should be explored as a therapeutic target for treating cancer and extending the use of PARP inhibitors.

Entities:  

Keywords:  Cancer genomics; Cancer metabolism; Ovarian cancer; Targeted therapies

Mesh:

Substances:

Year:  2019        PMID: 31508509      PMCID: PMC6733792          DOI: 10.1038/s42003-019-0580-6

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  65 in total

1.  Mechanistic rationale for inhibition of poly(ADP-ribose) polymerase in ETS gene fusion-positive prostate cancer.

Authors:  J Chad Brenner; Bushra Ateeq; Yong Li; Anastasia K Yocum; Qi Cao; Irfan A Asangani; Sonam Patel; Xiaoju Wang; Hallie Liang; Jindan Yu; Nallasivam Palanisamy; Javed Siddiqui; Wei Yan; Xuhong Cao; Rohit Mehra; Aaron Sabolch; Venkatesha Basrur; Robert J Lonigro; Jun Yang; Scott A Tomlins; Christopher A Maher; Kojo S J Elenitoba-Johnson; Maha Hussain; Nora M Navone; Kenneth J Pienta; Sooryanarayana Varambally; Felix Y Feng; Arul M Chinnaiyan
Journal:  Cancer Cell       Date:  2011-05-17       Impact factor: 31.743

2.  Genome-scale CRISPR-Cas9 knockout screening in human cells.

Authors:  Ophir Shalem; Neville E Sanjana; Ella Hartenian; Xi Shi; David A Scott; Tarjei Mikkelson; Dirk Heckl; Benjamin L Ebert; David E Root; John G Doench; Feng Zhang
Journal:  Science       Date:  2013-12-12       Impact factor: 47.728

3.  A synthetic lethal siRNA screen identifying genes mediating sensitivity to a PARP inhibitor.

Authors:  Nicholas C Turner; Christopher J Lord; Elizabeth Iorns; Rachel Brough; Sally Swift; Richard Elliott; Sydonia Rayter; Andrew N Tutt; Alan Ashworth
Journal:  EMBO J       Date:  2008-04-03       Impact factor: 11.598

4.  Acquired resistance to combination treatment with temozolomide and ABT-888 is mediated by both base excision repair and homologous recombination DNA repair pathways.

Authors:  Xuesong Liu; Edward K Han; Mark Anderson; Yan Shi; Dimitri Semizarov; Gang Wang; Thomas McGonigal; Lisa Roberts; Loren Lasko; Joann Palma; Gui-Dong Zhu; Thomas Penning; Saul Rosenberg; Vincent L Giranda; Yan Luo; Joel Leverson; Eric F Johnson; Alexander R Shoemaker
Journal:  Mol Cancer Res       Date:  2009-10-13       Impact factor: 5.852

5.  PARP Inhibitors as P-glyoprotein Substrates.

Authors:  Denise Lawlor; Patricia Martin; Steven Busschots; Julien Thery; John J O'Leary; Bryan T Hennessy; Britta Stordal
Journal:  J Pharm Sci       Date:  2014-04-03       Impact factor: 3.534

6.  Deficiency in the repair of DNA damage by homologous recombination and sensitivity to poly(ADP-ribose) polymerase inhibition.

Authors:  Nuala McCabe; Nicholas C Turner; Christopher J Lord; Katarzyna Kluzek; Aneta Bialkowska; Sally Swift; Sabrina Giavara; Mark J O'Connor; Andrew N Tutt; Małgorzata Z Zdzienicka; Graeme C M Smith; Alan Ashworth
Journal:  Cancer Res       Date:  2006-08-15       Impact factor: 12.701

7.  Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library.

Authors:  Hiroko Koike-Yusa; Yilong Li; E-Pien Tan; Martin Del Castillo Velasco-Herrera; Kosuke Yusa
Journal:  Nat Biotechnol       Date:  2013-12-23       Impact factor: 54.908

8.  A high-throughput RNA interference screen for DNA repair determinants of PARP inhibitor sensitivity.

Authors:  Christopher J Lord; Sarah McDonald; Sally Swift; Nicholas C Turner; Alan Ashworth
Journal:  DNA Repair (Amst)       Date:  2008-10-15

9.  Genome-wide profiling of genetic synthetic lethality identifies CDK12 as a novel determinant of PARP1/2 inhibitor sensitivity.

Authors:  Ilirjana Bajrami; Jessica R Frankum; Asha Konde; Rowan E Miller; Farah L Rehman; Rachel Brough; James Campbell; David Sims; Rumana Rafiq; Sean Hooper; Lina Chen; Iwanka Kozarewa; Ioannis Assiotis; Kerry Fenwick; Rachael Natrajan; Christopher J Lord; Alan Ashworth
Journal:  Cancer Res       Date:  2013-11-15       Impact factor: 12.701

10.  A genetic screen using the PiggyBac transposon in haploid cells identifies Parp1 as a mediator of olaparib toxicity.

Authors:  Stephen J Pettitt; Farah L Rehman; Ilirjana Bajrami; Rachel Brough; Fredrik Wallberg; Iwanka Kozarewa; Kerry Fenwick; Ioannis Assiotis; Lina Chen; James Campbell; Christopher J Lord; Alan Ashworth
Journal:  PLoS One       Date:  2013-04-25       Impact factor: 3.240

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  15 in total

1.  Nuclear TIGAR mediates an epigenetic and metabolic autoregulatory loop via NRF2 in cancer therapeutic resistance.

Authors:  Hong Wang; Qianqian Wang; Guodi Cai; Zhijian Duan; Zoann Nugent; Jie Huang; Jianwei Zheng; Alexander D Borowsky; Jian Jian Li; Peiqing Liu; Hsing-Jien Kung; Leigh Murphy; Hong-Wu Chen; Junjian Wang
Journal:  Acta Pharm Sin B       Date:  2021-10-21       Impact factor: 14.903

2.  Effect of the p53 P72R Polymorphism on Mutant TP53 Allele Selection in Human Cancer.

Authors:  Cristabelle De Souza; Jill Madden; Devin C Koestler; Dennis Minn; Dennis J Montoya; Kay Minn; Alan G Raetz; Zheng Zhu; Wen-Wu Xiao; Neeki Tahmassebi; Harikumara Reddy; Nina Nelson; Anthony N Karnezis; Jeremy Chien
Journal:  J Natl Cancer Inst       Date:  2021-09-04       Impact factor: 13.506

Review 3.  CRISPR screens guide the way for PARP and ATR inhibitor biomarker discovery.

Authors:  Emily M Schleicher; George-Lucian Moldovan
Journal:  FEBS J       Date:  2021-10-03       Impact factor: 5.542

Review 4.  Structure, regulation, and biological functions of TIGAR and its role in diseases.

Authors:  Jie Tang; Lei Chen; Zheng-Hong Qin; Rui Sheng
Journal:  Acta Pharmacol Sin       Date:  2021-01-28       Impact factor: 7.169

Review 5.  DNA Damage/Repair Management in Cancers.

Authors:  Jehad F Alhmoud; John F Woolley; Ala-Eddin Al Moustafa; Mohammed Imad Malki
Journal:  Cancers (Basel)       Date:  2020-04-23       Impact factor: 6.639

Review 6.  Participation of the ATR/CHK1 pathway in replicative stress targeted therapy of high-grade ovarian cancer.

Authors:  Patrycja Gralewska; Arkadiusz Gajek; Agnieszka Marczak; Aneta Rogalska
Journal:  J Hematol Oncol       Date:  2020-04-21       Impact factor: 17.388

Review 7.  PARP and PARG inhibitors in cancer treatment.

Authors:  Dea Slade
Journal:  Genes Dev       Date:  2020-02-06       Impact factor: 11.361

Review 8.  High-throughput approaches for precision medicine in high-grade serous ovarian cancer.

Authors:  Meinusha Govindarajan; Christoph Wohlmuth; Matthew Waas; Marcus Q Bernardini; Thomas Kislinger
Journal:  J Hematol Oncol       Date:  2020-10-09       Impact factor: 17.388

Review 9.  Metabolic landscapes in sarcomas.

Authors:  Richard Miallot; Franck Galland; Virginie Millet; Jean-Yves Blay; Philippe Naquet
Journal:  J Hematol Oncol       Date:  2021-07-22       Impact factor: 17.388

10.  The P72R Polymorphism in R248Q/W p53 Mutants Modifies the Mutant Effect on Epithelial to Mesenchymal Transition Phenotype and Cell Invasion via CXCL1 Expression.

Authors:  Cristabelle De Souza; Jill A Madden; Dennis Minn; Vigneshwari Easwar Kumar; Dennis J Montoya; Roshni Nambiar; Zheng Zhu; Wen-Wu Xiao; Neeki Tahmassebi; Harikumara Kathi; Nina Nelson; Anthony N Karnezis; Jeremy Chien
Journal:  Int J Mol Sci       Date:  2020-10-28       Impact factor: 5.923

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