Literature DB >> 29869321

Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching.

Inês Machado1,2, Matthew Toews3, Jie Luo4,5, Prashin Unadkat6, Walid Essayed6, Elizabeth George4, Pedro Teodoro7, Herculano Carvalho8, Jorge Martins7, Polina Golland9, Steve Pieper4,10, Sarah Frisken4, Alexandra Golby6, William Wells4,9.   

Abstract

PURPOSE: The brain undergoes significant structural change over the course of neurosurgery, including highly nonlinear deformation and resection. It can be informative to recover the spatial mapping between structures identified in preoperative surgical planning and the intraoperative state of the brain. We present a novel feature-based method for achieving robust, fully automatic deformable registration of intraoperative neurosurgical ultrasound images.
METHODS: A sparse set of local image feature correspondences is first estimated between ultrasound image pairs, after which rigid, affine and thin-plate spline models are used to estimate dense mappings throughout the image. Correspondences are derived from 3D features, distinctive generic image patterns that are automatically extracted from 3D ultrasound images and characterized in terms of their geometry (i.e., location, scale, and orientation) and a descriptor of local image appearance. Feature correspondences between ultrasound images are achieved based on a nearest-neighbor descriptor matching and probabilistic voting model similar to the Hough transform.
RESULTS: Experiments demonstrate our method on intraoperative ultrasound images acquired before and after opening of the dura mater, during resection and after resection in nine clinical cases. A total of 1620 automatically extracted 3D feature correspondences were manually validated by eleven experts and used to guide the registration. Then, using manually labeled corresponding landmarks in the pre- and post-resection ultrasound images, we show that our feature-based registration reduces the mean target registration error from an initial value of 3.3 to 1.5 mm.
CONCLUSIONS: This result demonstrates that the 3D features promise to offer a robust and accurate solution for 3D ultrasound registration and to correct for brain shift in image-guided neurosurgery.

Entities:  

Keywords:  3D scale-invariant features; Brain shift; Image registration; Image-guided neurosurgery; Intraoperative ultrasound

Mesh:

Year:  2018        PMID: 29869321      PMCID: PMC6151276          DOI: 10.1007/s11548-018-1786-7

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  37 in total

1.  A global optimisation method for robust affine registration of brain images.

Authors:  M Jenkinson; S Smith
Journal:  Med Image Anal       Date:  2001-06       Impact factor: 8.545

2.  Three-dimensional extended field-of-view ultrasound.

Authors:  Tony C Poon; Robert N Rohling
Journal:  Ultrasound Med Biol       Date:  2006-03       Impact factor: 2.998

3.  Brain-shift compensation using intraoperative ultrasound and constraint-based biomechanical simulation.

Authors:  Fanny Morin; Hadrien Courtecuisse; Ingerid Reinertsen; Florian Le Lann; Olivier Palombi; Yohan Payan; Matthieu Chabanas
Journal:  Med Image Anal       Date:  2017-06-15       Impact factor: 8.545

4.  Model-based correction of tissue compression for tracked ultrasound in soft tissue image-guided surgery.

Authors:  Thomas S Pheiffer; Reid C Thompson; Daniel C Rucker; Amber L Simpson; Michael I Miga
Journal:  Ultrasound Med Biol       Date:  2014-01-10       Impact factor: 2.998

5.  Measurement of intraoperative brain surface deformation under a craniotomy.

Authors:  D L Hill; C R Maurer; R J Maciunas; J A Barwise; J M Fitzpatrick; M Y Wang
Journal:  Neurosurgery       Date:  1998-09       Impact factor: 4.654

6.  Online database of clinical MR and ultrasound images of brain tumors.

Authors:  Laurence Mercier; Rolando F Del Maestro; Kevin Petrecca; David Araujo; Claire Haegelen; D Louis Collins
Journal:  Med Phys       Date:  2012-06       Impact factor: 4.071

7.  Impact of intraoperative high-field magnetic resonance imaging guidance on glioma surgery: a prospective volumetric analysis.

Authors:  Mustafa Aziz Hatiboglu; Jeffrey S Weinberg; Dima Suki; Ganesh Rao; Sujit S Prabhu; Komal Shah; Ed Jackson; Raymond Sawaya
Journal:  Neurosurgery       Date:  2009-06       Impact factor: 4.654

8.  PLUS: open-source toolkit for ultrasound-guided intervention systems.

Authors:  Andras Lasso; Tamas Heffter; Adam Rankin; Csaba Pinter; Tamas Ungi; Gabor Fichtinger
Journal:  IEEE Trans Biomed Eng       Date:  2014-05-09       Impact factor: 4.538

9.  REtroSpective Evaluation of Cerebral Tumors (RESECT): A clinical database of pre-operative MRI and intra-operative ultrasound in low-grade glioma surgeries.

Authors:  Yiming Xiao; Maryse Fortin; Geirmund Unsgård; Hassan Rivaz; Ingerid Reinertsen
Journal:  Med Phys       Date:  2017-05-16       Impact factor: 4.071

Review 10.  Association of the Extent of Resection With Survival in Glioblastoma: A Systematic Review and Meta-analysis.

Authors:  Timothy J Brown; Matthew C Brennan; Michael Li; Ephraim W Church; Nicholas J Brandmeir; Kevin L Rakszawski; Akshal S Patel; Elias B Rizk; Dima Suki; Raymond Sawaya; Michael Glantz
Journal:  JAMA Oncol       Date:  2016-11-01       Impact factor: 31.777

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  14 in total

1.  Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data.

Authors:  Inês Machado; Matthew Toews; Elizabeth George; Prashin Unadkat; Walid Essayed; Jie Luo; Pedro Teodoro; Herculano Carvalho; Jorge Martins; Polina Golland; Steve Pieper; Sarah Frisken; Alexandra Golby; William Wells Iii; Yangming Ou
Journal:  Neuroimage       Date:  2019-08-22       Impact factor: 6.556

2.  A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection.

Authors:  Sarah Frisken; Ma Luo; Parikshit Juvekar; Adomas Bunevicius; Ines Machado; Prashin Unadkat; Melina M Bertotti; Matt Toews; William M Wells; Michael I Miga; Alexandra J Golby
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-08-23       Impact factor: 2.924

3.  Automatic segmentation of brain tumor resections in intraoperative ultrasound images using U-Net.

Authors:  François-Xavier Carton; Matthieu Chabanas; Florian Le Lann; Jack H Noble
Journal:  J Med Imaging (Bellingham)       Date:  2020-02-18

4.  Accounting for intraoperative brain shift ascribable to cavity collapse during intracranial tumor resection.

Authors:  Saramati Narasimhan; Jared A Weis; Ma Luo; Amber L Simpson; Reid C Thompson; Michael I Miga
Journal:  J Med Imaging (Bellingham)       Date:  2020-06-22

5.  Alignment of Cortical Vessels viewed through the Surgical Microscope with Preoperative Imaging to Compensate for Brain Shift.

Authors:  Nazim Haouchine; Parikshit Juvekar; Alexandra Golby; William M Wells; Stephane Cotin; Sarah Frisken
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-03-16

6.  Pose Estimation and Non-Rigid Registration for Augmented Reality During Neurosurgery.

Authors:  Nazim Haouchine; Parikshit Juvekar; Michael Nercessian; William Wells; Alexandra Golby; Sarah Frisken
Journal:  IEEE Trans Biomed Eng       Date:  2022-03-18       Impact factor: 4.538

7.  Accounting for Deformation in Deep Brain Stimulation Surgery With Models: Comparison to Interventional Magnetic Resonance Imaging.

Authors:  Ma Luo; Paul S Larson; Alastair J Martin; Michael I Miga
Journal:  IEEE Trans Biomed Eng       Date:  2020-02-14       Impact factor: 4.756

8.  Challenges and Opportunities of Intraoperative 3D Ultrasound With Neuronavigation in Relation to Intraoperative MRI.

Authors:  Dhiego Chaves De Almeida Bastos; Parikshit Juvekar; Yanmei Tie; Nick Jowkar; Steve Pieper; Willam M Wells; Wenya Linda Bi; Alexandra Golby; Sarah Frisken; Tina Kapur
Journal:  Front Oncol       Date:  2021-05-03       Impact factor: 6.244

9.  Integrated multi-modality image-guided navigation for neurosurgery: open-source software platform using state-of-the-art clinical hardware.

Authors:  Jonathan Shapey; Thomas Dowrick; Rémi Delaunay; Eleanor C Mackle; Stephen Thompson; Mirek Janatka; Roland Guichard; Anastasis Georgoulas; David Pérez-Suárez; Robert Bradford; Shakeel R Saeed; Sébastien Ourselin; Matthew J Clarkson; Tom Vercauteren
Journal:  Int J Comput Assist Radiol Surg       Date:  2021-05-03       Impact factor: 3.421

Review 10.  Intraoperative Imaging for High-Grade Glioma Surgery.

Authors:  Thomas Noh; Martina Mustroph; Alexandra J Golby
Journal:  Neurosurg Clin N Am       Date:  2020-11-05       Impact factor: 2.509

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