Literature DB >> 31441044

Investigation of bias in an epilepsy machine learning algorithm trained on physician notes.

Benjamin D Wissel1, Hansel M Greiner2,3, Tracy A Glauser2,3, Francesco T Mangano2,3,4, Daniel Santel1, John P Pestian1,2, Rhonda D Szczesniak2,5, Judith W Dexheimer1,2,6.   

Abstract

Racial disparities in the utilization of epilepsy surgery are well documented, but it is unknown whether a natural language processing (NLP) algorithm trained on physician notes would produce biased recommendations for epilepsy presurgical evaluations. To assess this, an NLP algorithm was trained to identify potential surgical candidates using 1097 notes from 175 epilepsy patients with a history of resective epilepsy surgery and 268 patients who achieved seizure freedom without surgery (total N = 443 patients). The model was tested on 8340 notes from 3776 patients with epilepsy whose surgical candidacy status was unknown (2029 male, 1747 female, median age = 9 years; age range = 0-60 years). Multiple linear regression using demographic variables as covariates was used to test for correlations between patient race and surgical candidacy scores. After accounting for other demographic and socioeconomic variables, patient race, gender, and primary language did not influence surgical candidacy scores (P > .35 for all). Higher scores were given to patients >18 years old who traveled farther to receive care, and those who had a higher family income and public insurance (P < .001, .001, .001, and .01, respectively). Demographic effects on surgical candidacy scores appeared to reflect patterns in patient referrals. Wiley Periodicals, Inc.
© 2019 International League Against Epilepsy.

Entities:  

Keywords:  clinical decision support; epilepsy surgery; machine learning; natural language processing

Mesh:

Year:  2019        PMID: 31441044      PMCID: PMC6731998          DOI: 10.1111/epi.16320

Source DB:  PubMed          Journal:  Epilepsia        ISSN: 0013-9580            Impact factor:   5.864


  13 in total

1.  Racial disparities in the surgical management of intractable temporal lobe epilepsy in the United States: a population-based analysis.

Authors:  Shearwood McClelland; Hongfei Guo; Kolawole S Okuyemi
Journal:  Arch Neurol       Date:  2010-05

2.  Semantics derived automatically from language corpora contain human-like biases.

Authors:  Aylin Caliskan; Joanna J Bryson; Arvind Narayanan
Journal:  Science       Date:  2017-04-14       Impact factor: 47.728

3.  Epilepsy surgery trends in the United States, 1990-2008.

Authors:  D J Englot; D Ouyang; P A Garcia; N M Barbaro; E F Chang
Journal:  Neurology       Date:  2012-03-21       Impact factor: 9.910

4.  Increasing utilization of pediatric epilepsy surgery in the United States between 1997 and 2009.

Authors:  Elia M Pestana Knight; Nicholas K Schiltz; Paul M Bakaki; Siran M Koroukian; Samden D Lhatoo; Kitti Kaiboriboon
Journal:  Epilepsia       Date:  2015-01-29       Impact factor: 5.864

5.  Auditing access to specialty care for children with public insurance.

Authors:  Joanna Bisgaier; Karin V Rhodes
Journal:  N Engl J Med       Date:  2011-06-16       Impact factor: 91.245

Review 6.  Racial/ethnic disparities in the treatment of epilepsy: what do we know? What do we need to know?

Authors:  Magdalena Szaflarski; Jerzy P Szaflarski; Michael D Privitera; David M Ficker; Ronnie D Horner
Journal:  Epilepsy Behav       Date:  2006-07-12       Impact factor: 2.937

7.  What This Computer Needs Is a Physician: Humanism and Artificial Intelligence.

Authors:  Abraham Verghese; Nigam H Shah; Robert A Harrington
Journal:  JAMA       Date:  2018-01-02       Impact factor: 56.272

8.  Word embeddings quantify 100 years of gender and ethnic stereotypes.

Authors:  Nikhil Garg; Londa Schiebinger; Dan Jurafsky; James Zou
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-03       Impact factor: 11.205

9.  Distinguishing language and race disparities in epilepsy surgery.

Authors:  John P Betjemann; Atalie C Thompson; Carlos Santos-Sánchez; Paul A Garcia; Susan L Ivey
Journal:  Epilepsy Behav       Date:  2013-07-24       Impact factor: 2.937

10.  Methodological Issues in Predicting Pediatric Epilepsy Surgery Candidates Through Natural Language Processing and Machine Learning.

Authors:  Kevin Bretonnel Cohen; Benjamin Glass; Hansel M Greiner; Katherine Holland-Bouley; Shannon Standridge; Ravindra Arya; Robert Faist; Diego Morita; Francesco Mangano; Brian Connolly; Tracy Glauser; John Pestian
Journal:  Biomed Inform Insights       Date:  2016-05-22
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  8 in total

1.  Natural Language Processing Applications in the Clinical Neurosciences: A Machine Learning Augmented Systematic Review.

Authors:  Quinlan D Buchlak; Nazanin Esmaili; Christine Bennett; Farrokh Farrokhi
Journal:  Acta Neurochir Suppl       Date:  2022

Review 2.  Machine Learning in Neuro-Oncology, Epilepsy, Alzheimer's Disease, and Schizophrenia.

Authors:  Mason English; Chitra Kumar; Bonnie Legg Ditterline; Doniel Drazin; Nicholas Dietz
Journal:  Acta Neurochir Suppl       Date:  2022

Review 3.  Evaluation and Mitigation of Racial Bias in Clinical Machine Learning Models: Scoping Review.

Authors:  Jonathan Huang; Galal Galal; Mozziyar Etemadi; Mahesh Vaidyanathan
Journal:  JMIR Med Inform       Date:  2022-05-31

Review 4.  A scoping review of ethics considerations in clinical natural language processing.

Authors:  Oliver J Bear Don't Walk; Harry Reyes Nieva; Sandra Soo-Jin Lee; Noémie Elhadad
Journal:  JAMIA Open       Date:  2022-05-26

5.  Prospective validation of a machine learning model that uses provider notes to identify candidates for resective epilepsy surgery.

Authors:  Benjamin D Wissel; Hansel M Greiner; Tracy A Glauser; Katherine D Holland-Bouley; Francesco T Mangano; Daniel Santel; Robert Faist; Nanhua Zhang; John P Pestian; Rhonda D Szczesniak; Judith W Dexheimer
Journal:  Epilepsia       Date:  2019-11-29       Impact factor: 5.864

Review 6.  Can antiepileptic efficacy and epilepsy variables be studied from electronic health records? A review of current approaches.

Authors:  Barbara M Decker; Chloé E Hill; Steven N Baldassano; Pouya Khankhanian
Journal:  Seizure       Date:  2021-01-13       Impact factor: 3.184

7.  Early identification of epilepsy surgery candidates: A multicenter, machine learning study.

Authors:  Benjamin D Wissel; Hansel M Greiner; Tracy A Glauser; John P Pestian; Andrew J Kemme; Daniel Santel; David M Ficker; Francesco T Mangano; Rhonda D Szczesniak; Judith W Dexheimer
Journal:  Acta Neurol Scand       Date:  2021-03-26       Impact factor: 3.915

8.  Natural language processing in clinical neuroscience and psychiatry: A review.

Authors:  Claudio Crema; Giuseppe Attardi; Daniele Sartiano; Alberto Redolfi
Journal:  Front Psychiatry       Date:  2022-09-14       Impact factor: 5.435

  8 in total

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