Literature DB >> 31427288

H3K27me3-mediated silencing of structural genes is required for zebrafish heart regeneration.

Raz Ben-Yair1,2, Vincent L Butty3, Michele Busby4, Yutong Qiu5, Stuart S Levine3, Alon Goren6,5, Laurie A Boyer7, C Geoffrey Burns8,2,9, Caroline E Burns8,2,9,10.   

Abstract

Deciphering the genetic and epigenetic regulation of cardiomyocyte proliferation in organisms that are capable of robust cardiac renewal, such as zebrafish, represents an attractive inroad towards regenerating the human heart. Using integrated high-throughput transcriptional and chromatin analyses, we have identified a strong association between H3K27me3 deposition and reduced sarcomere and cytoskeletal gene expression in proliferative cardiomyocytes following cardiac injury in zebrafish. To move beyond an association, we generated an inducible transgenic strain expressing a mutant version of histone 3, H3.3K27M, that inhibits H3K27me3 catalysis in cardiomyocytes during the regenerative window. Hearts comprising H3.3K27M-expressing cardiomyocytes fail to regenerate, with wound edge cells showing heightened expression of structural genes and prominent sarcomeres. Although cell cycle re-entry was unperturbed, cytokinesis and wound invasion were significantly compromised. Collectively, our study identifies H3K27me3-mediated silencing of structural genes as requisite for zebrafish heart regeneration and suggests that repression of similar structural components in the border zone of an infarcted human heart might improve its regenerative capacity.
© 2019. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Cardiomyocyte; Cardiovascular; Chromatin; Epigenetic; H3K27me3; Heart regeneration; Proliferation; Zebrafish

Mesh:

Substances:

Year:  2019        PMID: 31427288      PMCID: PMC6803378          DOI: 10.1242/dev.178632

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  40 in total

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Authors:  Kenneth D Poss; Lindsay G Wilson; Mark T Keating
Journal:  Science       Date:  2002-12-13       Impact factor: 47.728

2.  Sequential myofibrillar breakdown accompanies mitotic division of mammalian cardiomyocytes.

Authors:  Preeti Ahuja; Evelyne Perriard; Jean-Claude Perriard; Elisabeth Ehler
Journal:  J Cell Sci       Date:  2004-07-01       Impact factor: 5.285

3.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

Authors:  Da Wei Huang; Brad T Sherman; Richard A Lempicki
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

4.  Complement Receptor C5aR1 Plays an Evolutionarily Conserved Role in Successful Cardiac Regeneration.

Authors:  Niranjana Natarajan; Yamen Abbas; Donald M Bryant; Juan Manuel Gonzalez-Rosa; Michka Sharpe; Aysu Uygur; Lucas H Cocco-Delgado; Nhi Ngoc Ho; Norma P Gerard; Craig J Gerard; Calum A MacRae; Caroline E Burns; C Geoffrey Burns; Jessica L Whited; Richard T Lee
Journal:  Circulation       Date:  2018-01-18       Impact factor: 29.690

5.  Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma.

Authors:  Peter W Lewis; Manuel M Müller; Matthew S Koletsky; Francisco Cordero; Shu Lin; Laura A Banaszynski; Benjamin A Garcia; Tom W Muir; Oren J Becher; C David Allis
Journal:  Science       Date:  2013-03-28       Impact factor: 47.728

Review 6.  Histone lysine methylation dynamics: establishment, regulation, and biological impact.

Authors:  Joshua C Black; Capucine Van Rechem; Johnathan R Whetstine
Journal:  Mol Cell       Date:  2012-11-30       Impact factor: 17.970

7.  A temporal chromatin signature in human embryonic stem cells identifies regulators of cardiac development.

Authors:  Sharon L Paige; Sean Thomas; Cristi L Stoick-Cooper; Hao Wang; Lisa Maves; Richard Sandstrom; Lil Pabon; Hans Reinecke; Gabriel Pratt; Gordon Keller; Randall T Moon; John Stamatoyannopoulos; Charles E Murry
Journal:  Cell       Date:  2012-09-11       Impact factor: 41.582

8.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

9.  In vivo cardiac reprogramming contributes to zebrafish heart regeneration.

Authors:  Ruilin Zhang; Peidong Han; Hongbo Yang; Kunfu Ouyang; Derek Lee; Yi-Fan Lin; Karen Ocorr; Guson Kang; Ju Chen; Didier Y R Stainier; Deborah Yelon; Neil C Chi
Journal:  Nature       Date:  2013-06-19       Impact factor: 49.962

Review 10.  Zebrafish heart regeneration: 15 years of discoveries.

Authors:  Juan Manuel González-Rosa; Caroline E Burns; C Geoffrey Burns
Journal:  Regeneration (Oxf)       Date:  2017-09-28
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  16 in total

1.  Signals for cardiomyocyte proliferation during zebrafish heart regeneration.

Authors:  Mira I Pronobis; Kenneth D Poss
Journal:  Curr Opin Physiol       Date:  2020-02-19

2.  AP-1 Contributes to Chromatin Accessibility to Promote Sarcomere Disassembly and Cardiomyocyte Protrusion During Zebrafish Heart Regeneration.

Authors:  Arica Beisaw; Carsten Kuenne; Stefan Guenther; Julia Dallmann; Chi-Chung Wu; Mette Bentsen; Mario Looso; Didier Y R Stainier
Journal:  Circ Res       Date:  2020-04-21       Impact factor: 17.367

3.  Genetic, Epigenetic, and Post-Transcriptional Basis of Divergent Tissue Regenerative Capacities Among Vertebrates.

Authors:  Sheamin Khyeam; Sukjun Lee; Guo N Huang
Journal:  Adv Genet (Hoboken)       Date:  2021-06

4.  Enhancer selection dictates gene expression responses in remote organs during tissue regeneration.

Authors:  Fei Sun; Jianhong Ou; Adam R Shoffner; Yu Luan; Hongbo Yang; Lingyun Song; Alexias Safi; Jingli Cao; Feng Yue; Gregory E Crawford; Kenneth D Poss
Journal:  Nat Cell Biol       Date:  2022-05-05       Impact factor: 28.213

Review 5.  A Roadmap to Heart Regeneration Through Conserved Mechanisms in Zebrafish and Mammals.

Authors:  Kyla D Brezitski; Alexander W Goff; Paige DeBenedittis; Ravi Karra
Journal:  Curr Cardiol Rep       Date:  2021-03-02       Impact factor: 2.931

Review 6.  Gene regulatory programmes of tissue regeneration.

Authors:  Joseph A Goldman; Kenneth D Poss
Journal:  Nat Rev Genet       Date:  2020-06-05       Impact factor: 53.242

7.  Decoding an organ regeneration switch by dissecting cardiac regeneration enhancers.

Authors:  Ian J Begeman; Kwangdeok Shin; Daniel Osorio-Méndez; Andrew Kurth; Nutishia Lee; Trevor J Chamberlain; Francisco J Pelegri; Junsu Kang
Journal:  Development       Date:  2020-12-23       Impact factor: 6.862

8.  Stimulation of glycolysis promotes cardiomyocyte proliferation after injury in adult zebrafish.

Authors:  Rubén Marín-Juez; Hadil El-Sammak; Ryuichi Fukuda; Arica Beisaw; Radhan Ramadass; Carsten Kuenne; Stefan Guenther; Anne Konzer; Aditya M Bhagwat; Johannes Graumann; Didier Yr Stainier
Journal:  EMBO Rep       Date:  2020-07-09       Impact factor: 8.807

Review 9.  Hooked on heart regeneration: the zebrafish guide to recovery.

Authors:  Katherine M Ross Stewart; Sophie L Walker; Andrew H Baker; Paul R Riley; Mairi Brittan
Journal:  Cardiovasc Res       Date:  2022-06-22       Impact factor: 13.081

Review 10.  Regeneration enhancers: A clue to reactivation of developmental genes.

Authors:  Nanoka Suzuki; Haruki Ochi
Journal:  Dev Growth Differ       Date:  2020-02-25       Impact factor: 2.053

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