Literature DB >> 32504079

Gene regulatory programmes of tissue regeneration.

Joseph A Goldman1, Kenneth D Poss2,3.   

Abstract

Regeneration is the process by which organisms replace lost or damaged tissue, and regenerative capacity can vary greatly among species, tissues and life stages. Tissue regeneration shares certain hallmarks of embryonic development, in that lineage-specific factors can be repurposed upon injury to initiate morphogenesis; however, many differences exist between regeneration and embryogenesis. Recent studies of regenerating tissues in laboratory model organisms - such as acoel worms, frogs, fish and mice - have revealed that chromatin structure, dedicated enhancers and transcriptional networks are regulated in a context-specific manner to control key gene expression programmes. A deeper mechanistic understanding of the gene regulatory networks of regeneration pathways might ultimately enable their targeted reactivation as a means to treat human injuries and degenerative diseases. In this Review, we consider the regeneration of body parts across a range of tissues and species to explore common themes and potentially exploitable elements.

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Year:  2020        PMID: 32504079      PMCID: PMC7448550          DOI: 10.1038/s41576-020-0239-7

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  153 in total

1.  Adult pancreatic beta-cells are formed by self-duplication rather than stem-cell differentiation.

Authors:  Yuval Dor; Juliana Brown; Olga I Martinez; Douglas A Melton
Journal:  Nature       Date:  2004-05-06       Impact factor: 49.962

Review 2.  A Regeneration Toolkit.

Authors:  Mayssa H Mokalled; Kenneth D Poss
Journal:  Dev Cell       Date:  2018-11-05       Impact factor: 12.270

3.  Bone regenerates via dedifferentiation of osteoblasts in the zebrafish fin.

Authors:  Franziska Knopf; Christina Hammond; Avinash Chekuru; Thomas Kurth; Stefan Hans; Christopher W Weber; Gina Mahatma; Shannon Fisher; Michael Brand; Stefan Schulte-Merker; Gilbert Weidinger
Journal:  Dev Cell       Date:  2011-05-17       Impact factor: 12.270

4.  Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration.

Authors:  Daniel E Wagner; Irving E Wang; Peter W Reddien
Journal:  Science       Date:  2011-05-13       Impact factor: 47.728

5.  Cells keep a memory of their tissue origin during axolotl limb regeneration.

Authors:  Martin Kragl; Dunja Knapp; Eugen Nacu; Shahryar Khattak; Malcolm Maden; Hans Henning Epperlein; Elly M Tanaka
Journal:  Nature       Date:  2009-07-02       Impact factor: 49.962

Review 6.  Diverse mechanisms for endogenous regeneration and repair in mammalian organs.

Authors:  James M Wells; Fiona M Watt
Journal:  Nature       Date:  2018-05-16       Impact factor: 49.962

Review 7.  Angiocrine functions of organ-specific endothelial cells.

Authors:  Shahin Rafii; Jason M Butler; Bi-Sen Ding
Journal:  Nature       Date:  2016-01-21       Impact factor: 49.962

Review 8.  A Muscle Stem Cell Support Group: Coordinated Cellular Responses in Muscle Regeneration.

Authors:  Michael N Wosczyna; Thomas A Rando
Journal:  Dev Cell       Date:  2018-07-16       Impact factor: 12.270

9.  Primary contribution to zebrafish heart regeneration by gata4(+) cardiomyocytes.

Authors:  Kazu Kikuchi; Jennifer E Holdway; Andreas A Werdich; Ryan M Anderson; Yi Fang; Gregory F Egnaczyk; Todd Evans; Calum A Macrae; Didier Y R Stainier; Kenneth D Poss
Journal:  Nature       Date:  2010-03-25       Impact factor: 49.962

Review 10.  Advances in understanding tissue regenerative capacity and mechanisms in animals.

Authors:  Kenneth D Poss
Journal:  Nat Rev Genet       Date:  2010-09-14       Impact factor: 53.242

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  17 in total

1.  In vivo CRISPR screening identifies BAZ2 chromatin remodelers as druggable regulators of mammalian liver regeneration.

Authors:  Yuemeng Jia; Lin Li; Yu-Hsuan Lin; Purva Gopal; Shunli Shen; Kejin Zhou; Xueliang Yu; Tripti Sharma; Yu Zhang; Daniel J Siegwart; Joseph M Ready; Hao Zhu
Journal:  Cell Stem Cell       Date:  2022-01-31       Impact factor: 24.633

2.  Ets21C sustains a pro-regenerative transcriptional program in blastema cells of Drosophila imaginal discs.

Authors:  Melanie I Worley; Nicholas J Everetts; Riku Yasutomi; Rebecca J Chang; Shrey Saretha; Nir Yosef; Iswar K Hariharan
Journal:  Curr Biol       Date:  2022-07-11       Impact factor: 10.900

3.  Chemical reprogramming of human somatic cells to pluripotent stem cells.

Authors:  Jingyang Guan; Guan Wang; Jinlin Wang; Zhengyuan Zhang; Yao Fu; Lin Cheng; Gaofan Meng; Yulin Lyu; Jialiang Zhu; Yanqin Li; Yanglu Wang; Shijia Liuyang; Bei Liu; Zirun Yang; Huanjing He; Xinxing Zhong; Qijing Chen; Xu Zhang; Shicheng Sun; Weifeng Lai; Yan Shi; Lulu Liu; Lipeng Wang; Cheng Li; Shichun Lu; Hongkui Deng
Journal:  Nature       Date:  2022-04-13       Impact factor: 69.504

4.  Enhancer selection dictates gene expression responses in remote organs during tissue regeneration.

Authors:  Fei Sun; Jianhong Ou; Adam R Shoffner; Yu Luan; Hongbo Yang; Lingyun Song; Alexias Safi; Jingli Cao; Feng Yue; Gregory E Crawford; Kenneth D Poss
Journal:  Nat Cell Biol       Date:  2022-05-05       Impact factor: 28.213

5.  Enhancer decommissioning imposes an epigenetic barrier to sensory hair cell regeneration.

Authors:  Litao Tao; Haoze V Yu; Juan Llamas; Talon Trecek; Xizi Wang; Zlatka Stojanova; Andrew K Groves; Neil Segil
Journal:  Dev Cell       Date:  2021-07-30       Impact factor: 13.417

6.  Identification and requirements of enhancers that direct gene expression during zebrafish fin regeneration.

Authors:  John D Thompson; Jianhong Ou; Nutishia Lee; Kwangdeok Shin; Valentina Cigliola; Lingyun Song; Gregory E Crawford; Junsu Kang; Kenneth D Poss
Journal:  Development       Date:  2020-07-30       Impact factor: 6.862

Review 7.  MAPK/ERK Pathway as a Central Regulator in Vertebrate Organ Regeneration.

Authors:  Xiaomin Wen; Lindi Jiao; Hong Tan
Journal:  Int J Mol Sci       Date:  2022-01-27       Impact factor: 5.923

8.  Cell-intrinsic Aryl Hydrocarbon Receptor signalling is required for the resolution of injury-induced colonic stem cells.

Authors:  Kathleen Shah; Muralidhara Rao Maradana; M Joaquina Delàs; Amina Metidji; Frederike Graelmann; Miriam Llorian; Probir Chakravarty; Ying Li; Mauro Tolaini; Michael Shapiro; Gavin Kelly; Chris Cheshire; Deendyal Bhurta; Sandip B Bharate; Brigitta Stockinger
Journal:  Nat Commun       Date:  2022-04-05       Impact factor: 17.694

9.  Evolutionary insights into heart regeneration.

Authors:  Jing-Wei Xiong
Journal:  Cell Regen       Date:  2020-12-01

Review 10.  Approaches to Inducing β-Cell Regeneration.

Authors:  Fred Levine
Journal:  Biomedicines       Date:  2022-02-28
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