Gordian Hamerla1, Hans-Jonas Meyer2, Stefan Schob3, Daniel T Ginat4, Ashley Altman4, Tchoyoson Lim5, Georg Alexander Gihr6, Diana Horvath-Rizea6, Karl-Titus Hoffmann3, Alexey Surov2. 1. Department of Neuroradiology, University of Leipzig, Leipzig, Germany. Electronic address: gordian.hamerla@medizin.uni-leipzig.de. 2. Department of Diagnostic and Interventional Radiology, University of Leip-zig, Leipzig, Germany. 3. Department of Neuroradiology, University of Leipzig, Leipzig, Germany. 4. University of Chicago, Pritzker School of Medicine, Chicago, IL, USA. 5. Department of Neuroradiology, National Neuroscience Institute, Singapore. 6. Clinic for Neuroradiology, Katharinenhospital Stuttgart, Stuttgart, Germany.
Abstract
BACKGROUND AND PURPOSE: Advanced imaging analysis for the prediction of tumor biology and modelling of clinically relevant parameters using computed imaging features is part of the emerging field of radiomics research. Here we test the hypothesis that a machine learning approach can distinguish grade 1 from higher gradings in meningioma patients using radiomics features derived from a heterogenous multicenter dataset of multi-paramedic MRI. METHODS: A total of 138 patients from 5 international centers that underwent MRI prior to surgical resection of intracranial meningiomas were included. Segmentation was performed manually on co-registered multi-parametric MR images using apparent diffusion coefficient (ADC) maps, T1-weighted (T1), post-contrast T1-weighted (T1c), subtraction maps (Sub, T1c - T1), T2-weighted fluid-attenuated inversion recovery (FLAIR) and T2-weighted (T2) images. Feature selection was performed and using cross-validation to separate training from testing data, four machine learning classifiers were scored on combinations of MRI modalities: random forest (RF), extreme gradient boosting (XGBoost), support vector machine (SVM) and multilayer perceptron (MLP). RESULTS: The best AUC of 0.97 (1.0 and 0.97 for sensitivity and specificity) was observed for the combination of ADC, ADC of the peritumoral edema, T1, T1c, Sub and FLAIR-derived features using only 16 of the 10,914 possible features and XGBoost. CONCLUSIONS: Machine learning using radiomics features derived from multi-parametric MRI is capable of high AUC scores with high sensitivity and specificity in classifying meningiomas between low and higher gradings despite heterogeneous protocols across different centers. Feature selection can be performed effectively even when extracting a large amount of data for radiomics fingerprinting.
BACKGROUND AND PURPOSE: Advanced imaging analysis for the prediction of tumor biology and modelling of clinically relevant parameters using computed imaging features is part of the emerging field of radiomics research. Here we test the hypothesis that a machine learning approach can distinguish grade 1 from higher gradings in meningiomapatients using radiomics features derived from a heterogenous multicenter dataset of multi-paramedic MRI. METHODS: A total of 138 patients from 5 international centers that underwent MRI prior to surgical resection of intracranial meningiomas were included. Segmentation was performed manually on co-registered multi-parametric MR images using apparent diffusion coefficient (ADC) maps, T1-weighted (T1), post-contrast T1-weighted (T1c), subtraction maps (Sub, T1c - T1), T2-weighted fluid-attenuated inversion recovery (FLAIR) and T2-weighted (T2) images. Feature selection was performed and using cross-validation to separate training from testing data, four machine learning classifiers were scored on combinations of MRI modalities: random forest (RF), extreme gradient boosting (XGBoost), support vector machine (SVM) and multilayer perceptron (MLP). RESULTS: The best AUC of 0.97 (1.0 and 0.97 for sensitivity and specificity) was observed for the combination of ADC, ADC of the peritumoral edema, T1, T1c, Sub and FLAIR-derived features using only 16 of the 10,914 possible features and XGBoost. CONCLUSIONS: Machine learning using radiomics features derived from multi-parametric MRI is capable of high AUC scores with high sensitivity and specificity in classifying meningiomas between low and higher gradings despite heterogeneous protocols across different centers. Feature selection can be performed effectively even when extracting a large amount of data for radiomics fingerprinting.
Authors: Corey M Gill; Joshua Loewenstern; John W Rutland; Hanane Arib; Margaret Pain; Melissa Umphlett; Yayoi Kinoshita; Russell B McBride; Joshua Bederson; Michael Donovan; Robert Sebra; Mary Fowkes; Raj K Shrivastava Journal: Neuroradiology Date: 2020-08-12 Impact factor: 2.804
Authors: Lara Brunasso; Gianluca Ferini; Lapo Bonosi; Roberta Costanzo; Sofia Musso; Umberto E Benigno; Rosa M Gerardi; Giuseppe R Giammalva; Federica Paolini; Giuseppe E Umana; Francesca Graziano; Gianluca Scalia; Carmelo L Sturiale; Rina Di Bonaventura; Domenico G Iacopino; Rosario Maugeri Journal: Life (Basel) Date: 2022-04-14