Literature DB >> 31417771

Crystal structure of two N'-(1-phenyl-benzyl-idene)-2-(thio-phen-3-yl)acetohydrazides.

Trung Vu Quoc1, Linh Nguyen Ngoc1, Duong Tran Thi Thuy1,2, Manh Vu Quoc3, Thien Vuong Nguyen4,5, Yen Oanh Doan Thi6, Luc Van Meervelt7.   

Abstract

The synthesis, spectroscopic data, crystal and mol-ecular structures of two <span class="Chemical">N'-(1-phenyl-benzyl-idene)-2-(thio-phen-3-yl)acetohydrazides, namely N'-[1-(4-hy-droxy-phen-yl)benzyl-idene]-2-(thio-phen-3-yl)<class="Chemical">span class="Chemical">acetohydrazide, C13H10N2O2S, (3a), and N'-[1-(4-meth-oxy-phen-yl)benzyl-idene]-2-(thio-phen-3-yl)acetohydrazide, C14H14N2O2S, (3b), are described. Both compounds differ in the substituent at the para position of the phenyl ring: -OH for (3a) and -OCH3 for (3b). In (3a), the thio-phene ring is disordered over two orientations with occupancies of 0.762 (3) and 0.238 (3). The configuration about the C=N bond is E. The thio-phene and phenyl rings are inclined by 84.0 (3) and 87.0 (9)° for the major- and minor-occupancy disorder components in (3a), and by 85.89 (12)° in (3b). Although these dihedral angles are similar, the conformation of the linker between the two rings is different [the C-C-C-N torsion angle is -ac for (3a) and -sc for (3b), while the C6-C7-N9-N10 torsion angle is +ap for (3a) and -sp for (3b)]. A common feature in the crystal packing of (3a) and (3b) is the presence of N-H⋯O hydrogen bonds, resulting in the formation of chains of mol-ecules running along the b-axis direction in the case of (3a), or inversion dimers for (3b). The most prominent contributions to the surface contacts are those in which H atoms are involved, as confirmed by an analysis of the Hirshfeld surface.

Entities:  

Keywords:  Hirshfeld analysis; acetohydrazides; crystal structure; thio­phene

Year:  2019        PMID: 31417771      PMCID: PMC6690450          DOI: 10.1107/S2056989019008892

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

<span class="Chemical">Acetohydrazides are considered to be good candidates for different pharmaceutical applications, including their use as anti­bacterial, anti­fugal, anti­microbial and anti­convulsant agents (Yadav et al., 2015 ▸; Bharti et al., 2010 ▸; Loncle et al., 2004 ▸; Papakonstanti­nou-Garoufalias et al., 2002 ▸). Moreover, many of them have shown analgesic and anti­platelet properties (Wardakhan et al., 2013 ▸). Combinations of <class="Chemical">span class="Chemical">acetohydrazide with other heterocyclic rings have also been investigated, such as the hydrazide-based 2-oxonicotino­nitrile derivatives that are considered to be potential anti­microbial agents (El-Sayed et al., 2018 ▸). As a continuation of our research (Nguyen et al., 2016 ▸; Vu et al., 2016 ▸, 2017 ▸) on the chemical and physical properties of novel polythio­phenes, a new thio­phene monomer-containing <span class="Chemical">acetohydrazide has been prepared. We have synthesized two N′-(1-(phenyl­benzyl­idene)-2-(thio­phen-3-yl)<class="Chemical">span class="Chemical">acetohydrazides and present here the spectroscopic data and crystal structures of the title compounds, together with the Hirshfeld surface analysis.

Structural commentary

The hy­droxy derivative (3a) crystallizes in the ortho­rhom­bic space group <span class="Chemical">Pbca. The thio­phene ring is <class="Chemical">span class="Disease">disordered over two sites (the major and minor components are labelled with the suffixes A and B, respectively), corresponding to a rotation about the C3—C6 bond of approximately 180° with population parameters 0.762 (3) for S1A/C1A–C5A and 0.238 (3) for S1B/C1B–C5B (Fig. 1 ▸). The configuration of the C11=N10 bond can be described as E [the N9—N10—C11—C12 torsion angle is 174.82 (16)°]. The torsion angle C7—N9—N10—C11 of 177.10 (18)° indicates that the conformation around the N9—N10 bond is +ap. The mol­ecule is twisted about the C6—C7 bond with a dihedral angle of 84.0 (3)° between the thio­phene and benzene rings [87.0 (9)° for S1B/C1B–C5B] .
Figure 1

A view of the mol­ecular structure of (3a), with atom labels and displacement ellipsoids drawn at the 50% probability level. The minor-disorder component is shown in light green.

The meth­oxy derivative (3b) (Fig. 2 ▸) crystallizes in the triclinic space group P . Compared to (3a), the central part of (3b) displays a similar +ap conformation around the N9—N10 bond and an E configuration of the C11=N10 bond, as illustrated by the torsion angles C7—N9—N10—C11 [177.8 (2)°] and N9—N10—C11—C12 [179.26 (19)°]. However, the conformation about the two other bonds, C6—C7 and especially C7—N9, in the linker between both rings is different. The torsion angle C3—C6—C7—N9 is −101.8 (2)° (or -ac) for (3a) and −85.4 (3)° (or -sc) for (3b). As a consequence, in (3b) a short C6—<span class="Chemical">H6⋯N10 inter­action occurs (Table 2 ▸). In (3a) we observe an +ap conformation [torsion angle C6—C7—N9—N10 is 167.45 (16)°], while this is <class="Chemical">span class="Chemical">-sp in (3b) [torsion angle C6—C7—N9—N10 is −5.8 (3)°]. The dihedral angle between the thio­phene and phenyl rings is 85.89 (12)°, in the same order as for (3a).
Figure 2

The mol­ecular structure of (3b) with atom labels and 50% probability displacement ellipsoids.

Table 2

Hydrogen-bond geometry (Å, °) for (3b)

Cg1 is the centroid of the S1/C1–C5 thio­phene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N9—H9⋯O8i 0.862.082.935 (3)179
C6—H6A⋯N100.972.442.782 (3)100
C13—H13⋯Cg1ii 0.932.683.611 (2)179

Symmetry codes: (i) ; (ii) .

Supra­molecular features

In the crystal, mol­ecules of (3a) are connected by N9—H9⋯O8i [symmetry code: (i) −x + , y + , z] <span class="Chemical">hydrogen bonds, resulting in the formation of chains in the b-axis direction with a (4) graph-set motif (Fig. 3 ▸, Table 1 ▸). In addition, chains with a (11) graph-set motif running along the <class="Chemical">span class="Species">a-axis direction are formed by O18—H18⋯O8ii [symmetry code: (ii) x − , y, −z + ] hydrogen bonds (Fig. 4 ▸, Table 1 ▸). Two weaker inter­actions are present in the packing: a C—H⋯O and C—H⋯π(phen­yl) inter­action (for details see Table 1 ▸).
Figure 3

Part of the crystal structure of (3a), showing the chain formation through N—H⋯O inter­actions (red dashed lines) along the b-axis direction. The minor disorder component is not shown. Symmetry codes: (i) −x + , y + , z; (v) −x + , y − , z.

Table 1

Hydrogen-bond geometry (Å, °) for (3a)

Cg3 is the centroid of the C12–C17 phenyl ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N9—H9⋯O8i 0.862.122.953 (2)162
O18—H18⋯O8ii 0.821.972.782 (2)169
C2A—H2A⋯O8iii 0.932.573.439 (7)155
C13—H13⋯Cg3iv 0.932.893.818 (3)176

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Figure 4

Part of the crystal structure of (3a), illustrating the chain formation through O—H⋯O inter­actions (red dashed lines) along the a-axis direction. The minor disorder component is not shown. Symmetry codes: (i) x + , y, −z +  ; (ii) x − , y, −z + .

Replacing the –OH group in (3a) by an –OMe group in (3b) changes the <span class="Chemical">hydrogen-bonding pattern. The crystal packing of (3b) is now characterized by the presence of two different inversion dimers. The first type, with an (8) graph-set motif, is formed by N9—H9⋯O8i [symmetry code: (i) −x, −y + 2, −z + 1] <class="Chemical">span class="Chemical">hydrogen bonds (Fig. 5 ▸, Table 2 ▸). The second one involves C13—H13⋯π(thio­phene) inter­actions (Fig. 6 ▸, Table 2 ▸).
Figure 5

A partial packing diagram of (3b), showing dimer formation through N—H⋯O inter­actions (red dashed lines). Symmetry code: (i) −x, −y + 2, −z + 1.

Figure 6

A partial packing diagram of (3b), illustrating the dimer formation through C—H⋯π inter­actions (gray dashed lines). Cg1 is the centroid of the S1/C2–C5 thio­phene ring. Symmetry code: (ii) −x + 1, −y + 2, −z + 1.

No voids or π–π stackings are observed in the crystal packing of (3a) and (3b).

Database survey

A search of the Cambridge Structural Database (CSD, Version 5.40, update of May 2019; Groom et al., 2016 ▸) for the central linker between the two rings in the title compound, CCH2—C(=O)—NH—N=CH—C (Fig. 7 ▸ a), resulted in 137 hits. Histograms of the distribution of the four torsion angles τ1 –τ4 along the linker backbone are shown in Fig. 7 ▸ b–e [the red and green lines depict the torsion angles for title compounds (3a) and (3b), respectively]. The histogram of τ1 reflects a wide spread with a preference for the −ap/+ap conformation, followed by the −sc/+sc conformation and only a few entries in the remaining regions. In the case of torsion angle τ2, two regions are preferred: −ap/+ap [for the majority of the entries and similar to (3a)] and −sp/+sp [similar to (3b)]. Torsion angles τ and τ4 show both a narrow spread in the region −ap/+ap.
Figure 7

(a) Fragment used for a search in the CSD. (b)–(e) Histograms of torsion angles τ1, τ2, τ3 and τ4, respectively. The vertical red and green lines show the torsion angles observed in title compounds (3a) and (3b), respectively.

Hirshfeld surface analysis

The Hirshfeld surface analysis (Spackman & Jayatilaka, 2009 ▸) and the associated two-dimensional fingerprint plots (McKinnon et al., 2007 ▸) were performed using CrystalExplorer (Turner et al., 2017 ▸). The Hirshfeld surfaces of compounds (3a) and (3b) mapped over d norm are given in Fig. 8 ▸.
Figure 8

The Hirshfeld surface mapped over d norm for (a) compound (3a) in the range −0.6166 to 1.1782 a.u., and (b) compound (3b) in the range −0.5274 to 1.2642 a.u.

The bright-red spots in Fig. 8 ▸ a near atoms O8 and N9 illustrate the N9—H9⋯O8 <span class="Chemical">hydrogen bond, and near atoms O8 and O18 the O18—H18⋯O8 <class="Chemical">span class="Chemical">hydrogen bond. The faint-red spots near atoms O8 and H2A, and C11 and H17 refer to short contacts in the crystal packing of (3a). The most significant contributions to the Hirshfeld surface are from H⋯H (30.5%), C⋯H/H⋯C (26.1%), O⋯H/H⋯O (18.6%) and S⋯H/H⋯S (10.7%) contacts. For compound (3b), the N9—H9⋯O8 dimer formation is viewed as the bright-red spots near atoms O8 and N9 in Fig. 8 ▸ b. The faint-red spots near atoms H19C and H13 are indicative for a short H19C⋯H19C contact and the C13—H13⋯π(thio­phene) inter­action. The most significant contributions to the Hirshfeld surface are from H⋯H (40.6%), C⋯H/H⋯C (22.2%), O⋯H/H⋯O (15.1%) and S⋯H/H⋯S (12.5%) contacts.

Synthesis and crystallization

The reaction scheme to synthesize the title compounds, (3a) and (3b), is given in Fig. 9 ▸.
Figure 9

Reaction scheme for the title compounds (3a) and (3b).

Methyl 2-(thio­phen-3-yl)acetate (1) and 2-(thio­phen-3-yl)<span class="Chemical">acetohydrazide (2) were synthesized according to our previous research (Vu et al., 2017 ▸). Compound (2) (3 mmol) and the appropriate <span class="Chemical">benzaldehyde derivatives (6 mmol) with <class="Chemical">span class="Chemical">acetic acid (1.5 mL) in ethanol (20 mL) were refluxed for 5 h. The reaction mixture was cooled down and the solid product was separated by filtration and purified by recrystallization in ethanol to give the compounds (3a) and (3b). White crystals; m.p. 443 K; yield 63%. IR (KBr, cm−1): 3289, 3207 (NH), 3050, 2874 (C—H), 1621 (C=O), 1606 (CH=N), 1511 (C=C). 1H NMR [Bruker XL-500, 500 MHz, d 6-CDCl3, δ (ppm), J (Hz)]: 7.19 (m, 1H, H2), 7.11 (d, 1H, 5 J = 5.0, H4), 7.25 (dd, 1H, 2 J = 3.0, 4 J = 5.0, H5), 4.07 (s, 2H, <span class="Chemical">H6), 9.17 (s, 1H, H8), 7.79 (s, 1H, H9), 7.52 (d, 2H, J = 8.5 H11, H15), 6.87 (d, 2H, J = 8.5 H12, H14), 10.10/10.04 (s, 1H, H16). 13C NMR [Bruker XL-500, 125 MHz, d 6-CDCl3, δ (ppm)]: 122.3/122.4 (C2), 135.3/135.4 (C3), 128.7/128.8 (C4), 125.4/125.8 (C5), 33.6/35.9 (C6), 165.7/171.4 (C7), 146.7 (C9), 143.5 (C10), 128.3/128.6 (C11, C15), 115.6/116.6 (C12,C14), 159.6/159.2 (C13). Calculation for C13<class="Chemical">span class="Species">H12N2O2S: M [+H] = 260.9 au. White crystals, m.p. 431 K, yield 53%. IR (KBr, cm−1): 3442, 3112 (NH), 3014, 2950 (C—H), 1706 (C=O), 1617 (CH=N), 1558, 1503 (C=C). 1H NMR [Bruker XL-500, 500 MHz, d 6-CDCl3, δ (ppm), J (Hz)]: 7.22 (m, 1H, H2); 7.12 (m, 1H, H4); 7.26 (dd, 1H, 2 J = 3.0, 5 J = 5.0, H5); 4.11 (s, 2H, <span class="Chemical">H6); 8.97 (s, 1H, H8); 7.69 (s, 1H, H9); 7.61 (d, 2H, J = 8.5, H11, H15); 6.94 (d, 2H, J = 8.5, H12, H14); 3.85 (m, 3H, H16). 13C NMR [Bruker XL-500, 125 MHz, d 6-CDCl3, δ (ppm)]: 122.8 (C2), 134.4 (C3), 129.3 (C4), 125.4 (C5), 34.3 (C6), 172.9 (C7), 143.6 (C9), 126.4 (C10), 128.8 (C11, C15), 114.3 (C12, C14), 161.3 (C13), 55.4 (C16). Calculation for C14<class="Chemical">span class="Species">H14N2O2S: M [+H] = 274.9 au.

Refinement details

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. All <span class="Disease">H atoms were placed in idealized positions and refined in riding mode, with U iso(H) values assigned as 1.2U eq of the parent atoms (1.5 times for methyl groups), with C—H distances of 0.93 (aromatic), 0.96 (CH3) and 0.97 Å (CH2), N—H distances of 0.86 Å and O—H distances of 0.82 Å (rotating OH). In (3a), the thio­phene ring is <class="Chemical">span class="Disease">disordered over two positions [population parameters 0.762 (3) and 0.238 (3)] and was refined with restraints for the bond lengths and angles in the ring. The anisotropic temperature factors for atoms S1, C2, C4 and C5 in both orientations were constrained to be equal. In the final cycles of refinement, four and two outliers were omitted for (3a) and (3b), respectively.
Table 3

Experimental details

 (3a)(3b)
Crystal data
Chemical formulaC13H12N2O2SC14H14N2O2S
M r 260.31274.33
Crystal system, space groupOrthorhombic, P b c a Triclinic, P
Temperature (K)293293
a, b, c (Å)13.0820 (8), 8.0287 (4), 24.0442 (12)6.5185 (2), 9.7447 (5), 10.9291 (6)
α, β, γ (°)90, 90, 9078.327 (4), 83.070 (4), 87.013 (4)
V3)2525.4 (2)674.63 (6)
Z 82
Radiation typeMo KαMo Kα
μ (mm−1)0.250.24
Crystal size (mm)0.35 × 0.2 × 0.050.5 × 0.15 × 0.05
 
Data collection
DiffractometerRigaku Oxford Diffraction SuperNova, Single source at offset/far, EosRigaku Oxford Diffraction SuperNova, Single source at offset/far, Eos
Absorption correctionMulti-scan (CrysAlis PRO; Rigaku OD, 2018)Multi-scan (CrysAlis PRO; Rigaku OD, 2018)
T min, T max 0.453, 1.0000.687, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections13596, 2571, 175913795, 2752, 2238
R int 0.0390.027
(sin θ/λ)max−1)0.6250.625
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.046, 0.109, 1.070.051, 0.145, 1.06
No. of reflections25712752
No. of parameters178173
No. of restraints800
H-atom treatmentH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.19, −0.180.33, −0.38

Computer programs: CrysAlis PRO (Rigaku OD, 2018 ▸), SHELXT (Sheldrick, 2015 ▸ a ▸), SHELXL (Sheldrick, 2015 ▸b) and OLEX2 (Dolomanov et al., 2009 ▸).

Crystal structure: contains datablock(s) 3a, 3b. DOI: 10.1107/S2056989019008892/rz5260sup1.cif Structure factors: contains datablock(s) 3a. DOI: 10.1107/S2056989019008892/rz52603asup2.hkl Structure factors: contains datablock(s) 3b. DOI: 10.1107/S2056989019008892/rz52603bsup3.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989019008892/rz52603asup4.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989019008892/rz52603bsup5.cml CCDC references: 1935593, 1935592 Additional supporting information: crystallographic information; 3D view; checkCIF report
C13H12N2O2SDx = 1.369 Mg m3
Mr = 260.31Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PbcaCell parameters from 3446 reflections
a = 13.0820 (8) Åθ = 3.1–23.7°
b = 8.0287 (4) ŵ = 0.25 mm1
c = 24.0442 (12) ÅT = 293 K
V = 2525.4 (2) Å3Plate, white
Z = 80.35 × 0.2 × 0.05 mm
F(000) = 1088
Rigaku Oxford Diffraction SuperNova, Single source at offset/far, Eos diffractometer2571 independent reflections
Radiation source: micro-focus sealed X-ray tube, SuperNova (Mo) X-ray Source1759 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.039
Detector resolution: 15.9631 pixels mm-1θmax = 26.4°, θmin = 3.1°
ω scansh = −16→15
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018)k = −9→10
Tmin = 0.453, Tmax = 1.000l = −28→30
13596 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.046w = 1/[σ2(Fo2) + (0.0334P)2 + 0.6755P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.109(Δ/σ)max < 0.001
S = 1.07Δρmax = 0.19 e Å3
2571 reflectionsΔρmin = −0.18 e Å3
178 parametersExtinction correction: SHELXL (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
80 restraintsExtinction coefficient: 0.0022 (6)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
S1A0.67164 (8)0.8283 (2)0.43607 (8)0.0718 (4)0.762 (3)
S1B0.6152 (4)0.9867 (10)0.3990 (3)0.0718 (4)0.238 (3)
C2A0.5667 (3)0.7484 (7)0.4673 (3)0.0542 (12)0.762 (3)
H2A0.5681850.6598970.4922160.065*0.762 (3)
C2B0.4941 (11)0.970 (3)0.4213 (16)0.0542 (12)0.238 (3)
H2B0.4430261.0471110.4138330.065*0.238 (3)
C30.47998 (16)0.8287 (2)0.45167 (8)0.0449 (5)
C4A0.5018 (5)0.9582 (10)0.4141 (5)0.062 (2)0.762 (3)
H4A0.4511691.0262380.3992050.074*0.762 (3)
C4B0.5719 (9)0.741 (3)0.4587 (11)0.062 (2)0.238 (3)
H4B0.5759240.6409130.4781660.074*0.238 (3)
C5A0.6056 (6)0.9770 (11)0.4008 (4)0.100 (3)0.762 (3)
H5A0.6332331.0563380.3769540.120*0.762 (3)
C5B0.6580 (10)0.818 (2)0.4337 (11)0.100 (3)0.238 (3)
H5B0.7254380.7816360.4359090.120*0.238 (3)
C60.37396 (16)0.7786 (3)0.47035 (8)0.0506 (6)
H6A0.3772540.7268250.5067610.061*
H6B0.3305280.8762000.4729220.061*
C70.33041 (15)0.6577 (3)0.42864 (8)0.0419 (5)
O80.36037 (11)0.51138 (17)0.42613 (5)0.0476 (4)
N90.26256 (13)0.7198 (2)0.39247 (6)0.0455 (4)
H90.2365950.8169550.3976690.055*
N100.23452 (13)0.6255 (2)0.34641 (6)0.0441 (4)
C110.16622 (15)0.6908 (2)0.31536 (8)0.0444 (5)
H110.1356670.7900930.3263640.053*
C120.13478 (16)0.6139 (2)0.26302 (8)0.0428 (5)
C130.04946 (18)0.6712 (3)0.23499 (9)0.0553 (6)
H130.0121780.7590470.2499520.066*
C140.01803 (18)0.6010 (3)0.18517 (9)0.0561 (6)
H14−0.0402090.6404540.1673310.067*
C150.07373 (17)0.4720 (2)0.16220 (8)0.0462 (5)
C160.16018 (17)0.4149 (3)0.18911 (9)0.0562 (6)
H160.1982330.3286790.1736410.067*
C170.19021 (17)0.4850 (3)0.23870 (9)0.0538 (6)
H170.2486570.4454410.2563290.065*
O180.04708 (13)0.39577 (19)0.11361 (6)0.0620 (5)
H18−0.0038090.4410850.1006630.093*
U11U22U33U12U13U23
S1A0.0493 (6)0.0807 (8)0.0853 (7)0.0003 (5)−0.0078 (5)−0.0050 (6)
S1B0.0493 (6)0.0807 (8)0.0853 (7)0.0003 (5)−0.0078 (5)−0.0050 (6)
C2A0.065 (2)0.051 (2)0.047 (3)0.0092 (16)−0.0120 (16)0.0016 (17)
C2B0.065 (2)0.051 (2)0.047 (3)0.0092 (16)−0.0120 (16)0.0016 (17)
C30.0513 (14)0.0403 (11)0.0430 (11)−0.0013 (10)−0.0106 (10)−0.0057 (9)
C4A0.060 (3)0.053 (3)0.072 (6)−0.0011 (18)−0.008 (2)0.015 (3)
C4B0.060 (3)0.053 (3)0.072 (6)−0.0011 (18)−0.008 (2)0.015 (3)
C5A0.132 (6)0.063 (3)0.103 (4)−0.025 (3)−0.011 (3)0.021 (2)
C5B0.132 (6)0.063 (3)0.103 (4)−0.025 (3)−0.011 (3)0.021 (2)
C60.0551 (15)0.0539 (13)0.0427 (11)0.0014 (11)−0.0020 (10)−0.0088 (10)
C70.0408 (13)0.0444 (12)0.0405 (11)−0.0017 (9)0.0056 (9)−0.0002 (9)
O80.0533 (10)0.0400 (8)0.0495 (8)0.0012 (7)−0.0023 (7)0.0005 (6)
N90.0489 (11)0.0370 (9)0.0506 (10)0.0033 (8)−0.0043 (8)−0.0084 (8)
N100.0471 (11)0.0408 (10)0.0444 (9)−0.0029 (8)−0.0030 (8)−0.0029 (8)
C110.0451 (13)0.0420 (11)0.0461 (11)0.0020 (9)0.0006 (10)0.0014 (9)
C120.0458 (13)0.0404 (11)0.0424 (11)−0.0007 (9)−0.0002 (9)0.0024 (9)
C130.0611 (16)0.0527 (14)0.0520 (13)0.0196 (11)−0.0082 (11)−0.0087 (10)
C140.0600 (15)0.0569 (14)0.0515 (13)0.0146 (11)−0.0136 (11)−0.0038 (11)
C150.0553 (14)0.0429 (12)0.0405 (11)0.0003 (10)−0.0008 (10)0.0007 (9)
C160.0616 (16)0.0536 (13)0.0535 (13)0.0137 (11)−0.0009 (12)−0.0088 (11)
C170.0516 (15)0.0545 (13)0.0553 (13)0.0117 (11)−0.0082 (11)−0.0018 (11)
O180.0748 (13)0.0574 (10)0.0539 (9)0.0122 (8)−0.0116 (8)−0.0129 (8)
S1A—C2A1.691 (4)C7—O81.240 (2)
C2A—H2A0.9300C7—N91.339 (2)
S1B—C2B1.677 (9)N9—H90.8600
C2B—H2B0.9300N9—N101.391 (2)
C2A—C31.357 (4)N10—C111.277 (2)
C2B—C31.360 (9)C11—H110.9300
C4A—H4A0.9300C11—C121.461 (3)
C4B—H4B0.9300C12—C131.382 (3)
S1A—C5A1.700 (7)C12—C171.393 (3)
C4A—C5A1.404 (6)C13—H130.9300
C5A—H5A0.9300C13—C141.386 (3)
S1B—C5B1.688 (9)C14—H140.9300
C4B—C5B1.419 (9)C14—C151.381 (3)
C5B—H5B0.9300C15—C161.381 (3)
C3—C4A1.407 (4)C15—O181.364 (2)
C3—C4B1.404 (9)C16—H160.9300
C3—C61.512 (3)C16—C171.376 (3)
C6—H6A0.9700C17—H170.9300
C6—H6B0.9700O18—H180.8200
C6—C71.508 (3)
C4A—C5A—S1A107.6 (5)C3—C4B—C5B114.2 (9)
C4B—C5B—S1B107.2 (8)O8—C7—C6121.54 (19)
S1A—C2A—H2A124.0O8—C7—N9122.07 (18)
S1B—C2B—H2B124.2N9—C7—C6116.27 (18)
C5A—C4A—C3115.0 (5)C7—N9—H9120.4
C5A—C4A—H4A122.5C7—N9—N10119.29 (16)
C5B—C4B—H4B122.9N10—N9—H9120.4
C2A—S1A—C5A94.3 (3)C11—N10—N9115.25 (17)
S1A—C5A—H5A126.2N10—C11—H11119.1
C4A—C5A—H5A126.2N10—C11—C12121.81 (19)
C2B—S1B—C5B95.2 (6)C12—C11—H11119.1
S1B—C5B—H5B126.4C13—C12—C11120.45 (18)
C4B—C5B—H5B126.4C13—C12—C17117.57 (19)
C2A—C3—C4A111.1 (3)C17—C12—C11121.95 (19)
C2B—C3—C4B111.5 (7)C12—C13—H13119.1
C4A—C3—C6125.0 (3)C12—C13—C14121.7 (2)
C2A—C3—C6123.9 (3)C14—C13—H13119.1
C4B—C3—C6128.0 (6)C13—C14—H14120.2
C2B—C3—C6120.4 (5)C15—C14—C13119.6 (2)
C3—C6—H6A110.0C15—C14—H14120.2
C3—C2A—S1A112.1 (3)C14—C15—C16119.6 (2)
C3—C2B—S1B111.6 (7)O18—C15—C14123.0 (2)
C3—C6—H6B110.0O18—C15—C16117.47 (19)
H6A—C6—H6B108.3C15—C16—H16119.9
C3—C2A—H2A124.0C17—C16—C15120.3 (2)
C3—C2B—H2B124.2C17—C16—H16119.9
C7—C6—C3108.68 (16)C12—C17—H17119.4
C7—C6—H6A110.0C16—C17—C12121.3 (2)
C3—C4A—H4A122.5C16—C17—H17119.4
C3—C4B—H4B122.9C15—O18—H18109.5
C7—C6—H6B110.0
C2A—S1A—C5A—C4A−0.7 (11)C6—C3—C4B—C5B176.8 (17)
C2B—S1B—C5B—C4B5 (3)C6—C3—C4A—C5A−177.0 (8)
C5B—S1B—C2B—C3−5 (3)C6—C7—N9—N10167.45 (16)
C5A—S1A—C2A—C30.8 (7)C7—N9—N10—C11177.10 (18)
S1B—C2B—C3—C4B3 (3)O8—C7—N9—N10−8.6 (3)
S1A—C2A—C3—C4A−0.7 (5)N9—N10—C11—C12174.82 (16)
S1A—C2A—C3—C6176.5 (3)N10—C11—C12—C13169.1 (2)
S1B—C2B—C3—C6−173.1 (14)N10—C11—C12—C17−12.8 (3)
C2B—C3—C6—C795 (2)C11—C12—C13—C14179.8 (2)
C2A—C3—C6—C7−91.1 (5)C11—C12—C17—C16−179.4 (2)
C4A—C3—C6—C785.7 (7)C12—C13—C14—C15−0.9 (4)
C4B—C3—C6—C7−81.0 (17)C13—C12—C17—C16−1.2 (3)
C2A—C3—C4A—C5A0.1 (11)C13—C14—C15—C16−0.1 (3)
C2B—C3—C4B—C5B1 (3)C13—C14—C15—O18179.4 (2)
C3—C4A—C5A—S1A0.5 (14)C14—C15—C16—C170.5 (3)
C3—C4B—C5B—S1B−4 (3)C15—C16—C17—C120.1 (3)
C3—C6—C7—O874.2 (2)C17—C12—C13—C141.6 (3)
C3—C6—C7—N9−101.8 (2)O18—C15—C16—C17−179.0 (2)
D—H···AD—HH···AD···AD—H···A
N9—H9···O8i0.862.122.953 (2)162
O18—H18···O8ii0.821.972.782 (2)169
C2A—H2A···O8iii0.932.573.439 (7)155
C13—H13···Cg3iv0.932.893.818 (3)176
C14H14N2O2SZ = 2
Mr = 274.33F(000) = 288
Triclinic, P1Dx = 1.350 Mg m3
a = 6.5185 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.7447 (5) ÅCell parameters from 5534 reflections
c = 10.9291 (6) Åθ = 3.1–27.2°
α = 78.327 (4)°µ = 0.24 mm1
β = 83.070 (4)°T = 293 K
γ = 87.013 (4)°Needle, white
V = 674.63 (6) Å30.5 × 0.15 × 0.05 mm
Rigaku Oxford Diffraction SuperNova, Single source at offset/far, Eos diffractometer2752 independent reflections
Radiation source: micro-focus sealed X-ray tube, SuperNova (Mo) X-ray Source2238 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.027
Detector resolution: 15.9631 pixels mm-1θmax = 26.4°, θmin = 2.6°
ω scansh = −8→8
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018)k = −12→12
Tmin = 0.687, Tmax = 1.000l = −13→13
13795 measured reflections
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.145w = 1/[σ2(Fo2) + (0.0537P)2 + 0.5294P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2752 reflectionsΔρmax = 0.33 e Å3
173 parametersΔρmin = −0.38 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
S10.68895 (12)0.78924 (10)0.16957 (9)0.0734 (3)
C20.5595 (4)0.7356 (3)0.3147 (3)0.0534 (6)
H20.6191530.7269650.3891680.064*
C30.3579 (4)0.7066 (2)0.3100 (2)0.0436 (5)
C40.3123 (4)0.7275 (3)0.1841 (2)0.0512 (6)
H40.1823100.7125130.1630710.061*
C50.4790 (4)0.7727 (3)0.0935 (2)0.0497 (6)
H50.4760970.7907290.0068520.060*
C60.2002 (4)0.6708 (3)0.4234 (2)0.0479 (6)
H6A0.2658530.6159100.4931420.057*
H6B0.0930720.6153470.4046200.057*
C70.1056 (3)0.8042 (3)0.4589 (2)0.0418 (5)
O8−0.0513 (2)0.86009 (19)0.41630 (16)0.0508 (4)
N90.2051 (3)0.8658 (2)0.53376 (18)0.0417 (5)
H90.1600890.9457170.5493500.050*
N100.3778 (3)0.8031 (2)0.58594 (17)0.0412 (5)
C110.4621 (3)0.8739 (2)0.6517 (2)0.0411 (5)
H110.4060000.9616420.6601650.049*
C120.6438 (3)0.8207 (2)0.7139 (2)0.0372 (5)
C130.7354 (4)0.9057 (2)0.7794 (2)0.0423 (5)
H130.6790050.9947410.7823540.051*
C140.9070 (4)0.8605 (2)0.8396 (2)0.0444 (5)
H140.9660610.9190040.8822660.053*
C150.9921 (3)0.7276 (2)0.8368 (2)0.0409 (5)
C160.9037 (4)0.6415 (2)0.7722 (2)0.0442 (5)
H160.9600750.5522760.7699440.053*
C170.7322 (4)0.6880 (2)0.7113 (2)0.0435 (5)
H170.6746360.6296470.6678080.052*
O181.1602 (3)0.69079 (19)0.90073 (17)0.0565 (5)
C191.2603 (4)0.5592 (3)0.8926 (3)0.0634 (8)
H19A1.3072440.5572080.8062280.095*
H19B1.1647880.4854330.9255100.095*
H19C1.3763980.5461150.9404660.095*
U11U22U33U12U13U23
S10.0554 (5)0.0848 (6)0.0861 (6)−0.0076 (4)0.0084 (4)−0.0394 (5)
C20.0441 (13)0.0592 (16)0.0640 (16)0.0019 (11)−0.0103 (12)−0.0270 (13)
C30.0445 (13)0.0376 (12)0.0529 (14)−0.0006 (9)−0.0085 (10)−0.0175 (10)
C40.0541 (15)0.0493 (14)0.0568 (15)−0.0023 (11)−0.0156 (12)−0.0207 (12)
C50.0528 (14)0.0505 (14)0.0506 (14)−0.0044 (11)0.0003 (11)−0.0238 (11)
C60.0503 (14)0.0436 (13)0.0526 (14)−0.0098 (10)−0.0110 (11)−0.0108 (11)
C70.0368 (12)0.0511 (13)0.0368 (11)−0.0088 (10)−0.0037 (9)−0.0056 (10)
O80.0366 (9)0.0680 (12)0.0511 (10)−0.0008 (8)−0.0129 (7)−0.0152 (8)
N90.0364 (10)0.0489 (11)0.0424 (10)0.0032 (8)−0.0114 (8)−0.0121 (8)
N100.0381 (10)0.0472 (11)0.0386 (10)0.0011 (8)−0.0096 (8)−0.0069 (8)
C110.0421 (12)0.0422 (12)0.0396 (12)0.0021 (9)−0.0073 (9)−0.0087 (9)
C120.0370 (11)0.0399 (12)0.0343 (11)−0.0020 (9)−0.0055 (9)−0.0052 (9)
C130.0485 (13)0.0361 (12)0.0436 (12)0.0034 (10)−0.0101 (10)−0.0098 (9)
C140.0498 (13)0.0439 (13)0.0444 (13)−0.0029 (10)−0.0149 (10)−0.0143 (10)
C150.0393 (12)0.0467 (13)0.0356 (11)−0.0006 (10)−0.0088 (9)−0.0034 (9)
C160.0482 (13)0.0365 (12)0.0491 (13)0.0036 (10)−0.0117 (11)−0.0094 (10)
C170.0470 (13)0.0408 (12)0.0465 (13)−0.0032 (10)−0.0113 (10)−0.0135 (10)
O180.0538 (10)0.0595 (11)0.0613 (11)0.0109 (8)−0.0284 (9)−0.0142 (9)
C190.0560 (16)0.0645 (18)0.0690 (18)0.0175 (13)−0.0214 (14)−0.0085 (14)
S1—C21.700 (3)C11—H110.9300
S1—C51.715 (3)C11—C121.456 (3)
C2—H20.9300C12—C131.396 (3)
C2—C31.368 (3)C12—C171.393 (3)
C3—C41.415 (3)C13—H130.9300
C3—C61.507 (3)C13—C141.374 (3)
C4—H40.9300C14—H140.9300
C4—C51.403 (4)C14—C151.387 (3)
C5—H50.9300C15—C161.387 (3)
C6—H6A0.9700C15—O181.363 (3)
C6—H6B0.9700C16—H160.9300
C6—C71.511 (3)C16—C171.379 (3)
C7—O81.230 (3)C17—H170.9300
C7—N91.348 (3)O18—C191.422 (3)
N9—H90.8600C19—H19A0.9600
N9—N101.382 (2)C19—H19B0.9600
N10—C111.277 (3)C19—H19C0.9600
C2—S1—C593.48 (13)N10—C11—C12121.7 (2)
S1—C2—H2123.7C12—C11—H11119.2
C3—C2—S1112.5 (2)C13—C12—C11119.1 (2)
C3—C2—H2123.7C17—C12—C11123.1 (2)
C2—C3—C4111.0 (2)C17—C12—C13117.8 (2)
C2—C3—C6124.5 (2)C12—C13—H13119.3
C4—C3—C6124.3 (2)C14—C13—C12121.4 (2)
C3—C4—H4122.7C14—C13—H13119.3
C5—C4—C3114.5 (2)C13—C14—H14120.0
C5—C4—H4122.7C13—C14—C15120.0 (2)
S1—C5—H5125.7C15—C14—H14120.0
C4—C5—S1108.50 (19)C14—C15—C16119.5 (2)
C4—C5—H5125.7O18—C15—C14116.0 (2)
C3—C6—H6A109.8O18—C15—C16124.5 (2)
C3—C6—H6B109.8C15—C16—H16119.9
C3—C6—C7109.57 (19)C17—C16—C15120.1 (2)
H6A—C6—H6B108.2C17—C16—H16119.9
C7—C6—H6A109.8C12—C17—H17119.4
C7—C6—H6B109.8C16—C17—C12121.2 (2)
O8—C7—C6121.7 (2)C16—C17—H17119.4
O8—C7—N9120.2 (2)C15—O18—C19117.5 (2)
N9—C7—C6117.9 (2)O18—C19—H19A109.5
C7—N9—H9119.3O18—C19—H19B109.5
C7—N9—N10121.3 (2)O18—C19—H19C109.5
N10—N9—H9119.3H19A—C19—H19B109.5
C11—N10—N9115.4 (2)H19A—C19—H19C109.5
N10—C11—H11119.2H19B—C19—H19C109.5
S1—C2—C3—C40.8 (3)N10—C11—C12—C13176.9 (2)
S1—C2—C3—C6−173.66 (19)N10—C11—C12—C17−3.1 (4)
C2—S1—C5—C40.8 (2)C11—C12—C13—C14180.0 (2)
C2—C3—C4—C5−0.2 (3)C11—C12—C17—C16−179.6 (2)
C2—C3—C6—C784.9 (3)C12—C13—C14—C15−0.4 (4)
C3—C4—C5—S1−0.5 (3)C13—C12—C17—C160.4 (3)
C3—C6—C7—O890.8 (3)C13—C14—C15—C160.4 (4)
C3—C6—C7—N9−85.4 (3)C13—C14—C15—O18−179.0 (2)
C4—C3—C6—C7−88.8 (3)C14—C15—C16—C170.0 (4)
C5—S1—C2—C3−1.0 (2)C14—C15—O18—C19−175.7 (2)
C6—C3—C4—C5174.3 (2)C15—C16—C17—C12−0.4 (4)
C6—C7—N9—N10−5.8 (3)C16—C15—O18—C194.9 (4)
C7—N9—N10—C11177.8 (2)C17—C12—C13—C140.0 (3)
O8—C7—N9—N10177.97 (19)O18—C15—C16—C17179.4 (2)
N9—N10—C11—C12179.26 (19)
D—H···AD—HH···AD···AD—H···A
N9—H9···O8i0.862.082.935 (3)179
C6—H6A···N100.972.442.782 (3)100
C13—H13···Cg1ii0.932.683.611 (2)179
  8 in total

1.  Towards quantitative analysis of intermolecular interactions with Hirshfeld surfaces.

Authors:  Joshua J McKinnon; Dylan Jayatilaka; Mark A Spackman
Journal:  Chem Commun (Camb)       Date:  2007-10-07       Impact factor: 6.222

2.  Synthesis and antifungal activity of cholesterol-hydrazone derivatives.

Authors:  Céline Loncle; Jean Michel Brunel; Nicolas Vidal; Michel Dherbomez; Yves Letourneux
Journal:  Eur J Med Chem       Date:  2004-12       Impact factor: 6.514

3.  Synthesis and anti-tumor evaluation of novel hydrazide and hydrazide-hydrazone derivatives.

Authors:  Wagnat Wahba Wardakhan; Nahed Nasser Eid El-Sayed; Rafat Milad Mohareb
Journal:  Acta Pharm       Date:  2013-03       Impact factor: 2.230

4.  Synthesis, anti-bacterial and anti-fungal activities of some novel Schiff bases containing 2,4-disubstituted thiazole ring.

Authors:  S K Bharti; G Nath; R Tilak; S K Singh
Journal:  Eur J Med Chem       Date:  2009-11-06       Impact factor: 6.514

5.  Synthesis antimicrobial and antifungal activity of some new 3 substituted derivatives of 4-(2,4-dichlorophenyl)-5-adamantyl-1H-1,2,4-triazole.

Authors:  S Papakonstantinou-Garoufalias; N Pouli; P Marakos; A Chytyroglou-Ladas
Journal:  Farmaco       Date:  2002-12

6.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

8.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
  8 in total

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