Literature DB >> 31411080

Synthesis and biological evaluation of novel 3-(quinolin-4-ylamino)benzenesulfonamidesAQ3 as carbonic anhydrase isoforms I and II inhibitors.

Mohammad M Al-Sanea1, Ahmed Elkamhawy2,3, Sora Paik2, Silvia Bua4, So Ha Lee2, Mohamed A Abdelgawad1,5, Eun Joo Roh2,6, Wagdy M Eldehna7, Claudiu T Supuran4.   

Abstract

Carbonic anhydrases (CAs, EC 4.2.1.1) are crucial metalloenzymes that are involved in diverse bioprocesses. We report the synthesis and biological evaluation of novel series of benzenesulfonamides incorporating un/substituted ethyl quinoline-3-carboxylate moieties. The newly synthesised compounds were in vitro evaluated as inhibitors of the cytosolic human (h) isoforms hCA I and II. Both isoforms hCA I and II were inhibited by the quinolines reported here in variable degrees: hCA I was inhibited with KIs in the range of 0.966-9.091 μM, whereas hCA II in the range of 0.083-3.594 μM. The primary 7-chloro-6-flouro substituted sulphfonamide derivative 6e (KI = 0.083 μM) proved to be the most active quinoline in inhibiting hCA II, whereas, its secondary sulfonamide analog failed to inhibit the hCA II up to 10 μM, confirming the crucial role of the primary sulphfonamide group, as a zinc-binding group for CA inhibitory activity.

Entities:  

Keywords:  carbonic anhydrase; cytosolic isoforms hCA I and II; quinolines; synthesis

Mesh:

Substances:

Year:  2019        PMID: 31411080      PMCID: PMC6713088          DOI: 10.1080/14756366.2019.1652282

Source DB:  PubMed          Journal:  J Enzyme Inhib Med Chem        ISSN: 1475-6366            Impact factor:   5.051


Introduction

Carbonic anhydrases (CA) (CAs, EC 4.2.1.1) are zinc-containing metalloenzymes that are present in most organisms all over the tree of life,. These metalloenzymes efficiently catalyse the rapid interconversion of carbon dioxide and water to bicarbonate and protons. In humans, this fundamental reaction encompasses three simple chemical entities, CO2, HCO3−, and H+, essential in a host of physiological and pathological processes, such as calcification, bone resorption, electrolyte secretion, pH and CO2 homeostasis, tumorigenicity, and several biosynthetic reactions. Eight distinct genetic enzymatic families were identified; the α-, β-, γ-, δ-, ζ-. η-, θ- and ι-CAs. To date, 15 human (h) isoforms of CA have been identified, which have all belong to the α-class and have different patterns of tissue distribution and cellular localisation as the following; cytosolic (I, II, III, VII, and XIII), membrane-bound (IV, IX, XII, and XIV), secreted (VI) and mitochondrial (VA and VB) forms. CA I and II are present at high concentrations comparing to other CA isoforms in the erythrocytes cytosol and several other tissues. Several important pathological consequences result from the dysfunction of hCA II activity, thus this isoform is an established drug target for a multitude of diseases, such as oedema, epilepsy, acute mountain sickness, and glaucoma, where excessive aqueous humour is secreted within the eye, with the subsequent increase in the intraocular pressure (IOP). CA inhibitors (CAIs) are able to diminish IOP by decreasing the rate of bicarbonate formation and thus secretion of the aqueous humour. For more than 60 years, carbonic anhydrase inhibitors are in clinical use for the treatment of glaucoma, such as the topically acting dorzolamide and brinzolamide drugs, and the systemic acetazolamide and methazolamide drugs (Figure 1).
Figure 1.

Structures of some approved CAIs antiglaucoma drugs, and the target quinolines 6a–f and 11.

Structures of some approved CAIs antiglaucoma drugs, and the target quinolines 6a–f and 11. Pertaining to its prevalence in diverse natural products, such as alkaloids, and in different pharmacologically active substances, quinoline stands out as a promising privileged scaffold that is endowed with a wide spectrum of biological activities. Just to name a few, antimalarial, antileishmanial, anti-tubercular, antidepressant, anticancer, and antiglaucoma actions were reported for quinoline derivatives. Accordingly, medicinal chemists embarked on exploring various quinoline-based molecules comprehending their potential to develop promising and efficient bioactive compounds,. These efforts led to FDA approval for several quinoline-based drugs such as the anticancer agent lenvatinib, the anti-asthmathic drug montelukast, the antiviral Clioquinol, and the anaesthetic Dibucain. In the present study, we report a new series of primary benzenesulfonamides incorporating un/substituted ethyl quinoline-3-carboxylate (6a–6f, Figure 1) as well as the secondary benzenesulfonamide analogue (11, Figure 1), with the prime goal of developing effective quinoline-based antiglaucoma candidates targeting the cystolic isoform hCA II. These quinoline-based benzenesulfonamides were evaluated in vitro for their inhibitory activity towards the physiologically relevant hCA isoforms I and II, using stopped-flow CO2 hydrase assay.

Materials and methods

Chemistry

All reaction and manipulations were performed in nitrogen atmosphere using standard Schlenk techniques. All reaction solvents and reagents were purchased from commercial suppliers and used without further purification. Microwave-assisted synthesis was carried out in a Biotage Initiator + apparatus operating in single mode, the microwave cavity producing controlled irradiation at 2.45 GHz (Biotage AB, Uppsala, Sweden). The reactions were run in sealed vessels. These experiments were performed by employing magnetic stirring and a fixed hold time using variable power to reach (during 1 − 2 min) and then maintain the desired temperature in the vessel for the programed time period. The temperature was monitored by an IR sensor focused on a point on the reactor vial glass. The IR sensor was calibrated to internal solution reaction temperature by the manufacturer. The NMR spectra were obtained on Bruker Avance 400 (400 MHz 1H and 101 MHz 13 C NMR). 1H NMR spectra were referenced to tetramethylsilane (δ = 0.00 ppm) as an internal standard and were reported as follows: chemical shift, multiplicity (b = broad, s = singlet, d = doublet, t = triplet, dd = doublet of doublet, m = multiplet). Column chromatography was performed on Merck Silica Gel 60 (230–400 mesh) and eluting solvents for all of these chromatographic methods were noted as appropriated-mixed solvent with given volume-to-volume ratios. TLC was carried out using glass sheets pre-coated with silica gel 60 F254 purchased by Merk. High-resolution spectra were performed on Waters ACQUITY UPLC BEH C18 1.7 μ–Q-TOF SYNAPT G2-Si High Definition Mass Spectrometry. Compounds 3a-f, 4a-f and 10 were previously prepared.

General procedure for preparation of compounds 4a–f

A solution of compounds 3a–f (1.0 mmol) in POCl3 (6 ml) was refluxed for 1 h. The mixture was evaporated in vacuo and the residue was extracted with methylene chloride, crushed ice and aqueous NH3. The organic layer was dried over Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, ethyl acetate (EA): n-Hex 10: 1) to get key intermediates 4a-f,.

General procedures for preparation of the target quinolines 6a–f and 11

To a MW vial, were successively added the appropriate ethyl 4-chloroquinoline-3-carboxylate derivative 4a-f (0.21 mmol), 3-aminobenzenesulfonamide 5 (0.036 gm, 0.21 mmol) or 3-amino-N-methylbenzenesulfonamide 10 (0.040 gm, 0.21 mmol), and ethanol (12 ml) at room temperature. The MW vial was sealed and heated under MW conditions for 30 min at 150 °C. The mixture was evaporated in vacuo and the residue was extracted with EA and NaHCO3 (aq). The organic layer was dried over Na2SO4 and concentrated. The residue was purified by column chromatography (SiO2, EA: n-Hex), in a gradient elution with 1:5 (EA: n-hex) ratio, to furnish quinolines 6a–f and 11, respectively.

Ethyl 4-((3-sulphamoylphenyl)amino)quinoline-3-carboxylate (6a)

White solid, yield: 49%, mp: 183.6 − 185.0 °C; 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.16 (t, J = 6.8 Hz, 3H, CH2 CH), 4.05 (q, J = 6.8 Hz, 2H, CHCH3), 7.16–7.18 (m, 1H, H-2 of benzenesulfonamide), 7.34 (s, 2H, SO2NH2), 7.45–7.56 (m, 4H, H-4,5,6 of benzenesulfonamide and H-6 quinoline), 7.80–7.84 (m, 1H, H-7 quinoline), 8.01 (d, J = 8.0 Hz, 1H, H-5 quinoline), 8.10 (d, J = 8.4 Hz, 1H, H-8 quinoline), 9.01 (s, 1H, H-2 quinoline), 9.75 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.31 (CH3), 61.48, 111.07 (quinoline C-3), 116.42 (benzenesulfonamide C-2), 119.82 (benzenesulfonamide C-4), 121.40 (quinoline C-10), 121.92 (benzenesulfonamide C-6), 124.88 (quinoline C-5), 126.55 (quinoline C-6), 130.05 (quinoline C-8), 130.22 (benzenesulfonamide C-5), 131.95 (quinoline C7), 144.44 (benzenesulfonamide C-3), 145.60 (quinoline C-4), 148.12 (benzenesulfonamide C-1), 150.36 (quinoline C-2), 151.38 (quinoline C-9), 166.81 (C = O); HRMS (ESI) for C18H18N3O4S: calcd 372.1018, found: 372.1017 [M + H]+.

Ethyl 6-methyl-4-((3-sulphamoylphenyl)amino)quinoline-3-carboxylate (6 b)

Yellow solid, yield: 97%, mp: 223.0 − 224.5 °C; 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.09 (t, J = 5.6 Hz, 3H, CH2 CH), 2.40 (s, 3H, CH3), 3.89 (q, J = 5.6 Hz, 2H, CHCH3), 7.25 (s, 1H, H-2 of benzenesulfonamide), 7.39 (s, 2H, SO2NH2), 7.47–7.55 (m, 3H, H-4,5,6 of benzenesulfonamide), 7.73–7.74 (m, 1H, H-5 quinoline), 7.96 (s, 1H, quinoline H-7), 8.26 (s, 1H, H-8 quinoline), 8.88 (s, 1H, H-2 quinoline), 10.25 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.22 (CH2 CH3), 21.73 (CH3), 61.57 (CH2), 111.34 (quinoline C-3), 116.98 (benzenesulfonamide C-2), 120.58 (quinoline C-10), 121.17 (benzenesulfonamide C-4), 122.55 (benzenesulfonamide C-6), 123.97 (quinoline C-6), 127.10 (quinoline C-5), 130.19 (benzenesulfonamide C-5), 134.72 (quinoline C-8), 136.89 (quinoline C-7), 143.66 (benzenesulfonamide C-3), 145.60 (benzenesulfonamide C-1), 144.74 (quinoline C-2), 148.89 (quinoline C-9), 166.02 (C = O); HRMS (ESI) for C19H20N3O4S: calcd 386.1175, found: 386.1170 [M + H]+.

Ethyl 6-methoxy-4-((3-sulphamoylphenyl)amino)quinoline-3-carboxylate (6c)

White solid, yield: 61%, mp: 214.9 − 216.3 °C; 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.13 (t, J = 6.8 Hz, 3H, CH2 CH), 3.73 (s, 3H, OCH3), 3.99 (q, J = 6.8 Hz, 2H, CHCH3), 7.14–7.16 (m, 1H, H-2 of benzenesulfonamide), 7.33 (s, 2H, SO2NH2), 7.42–7.48 (m, 4H, H-4,5,6 of benzenesulfonamide and H-7 quinoline), 7.96 (s, 1H, H-5 quinoline), 7.91–7.93 (m, 1H, H-8 quinoline), 8.84 (s, 1H, quinoline H-2), 9.95 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.31 (CH2 CH3), 21.73 (CH3), 55.92 (OCH3) 61.40 (CH2), 103.51 (quinoline C-4), 111.54 (quinoline C-3), 116.36 (benzenesulfonamide C-2), 119.51 (benzenesulfonamide C-4), 121.78 (quinoline C-10), 122.35 (benzenesulfonamide C-6), 123.78 (quinoline C-7), 130.17 (benzenesulfonamide C-5), 131.56 (quinoline C-8), 144.36 (benzenesulfonamide C-3), 145.55 (quinoline C-9), 146.16 (benzenesulfonamide C-1), 146.59 (quinoline C-2), 148.90 (quinoline C-4), 157.51 (quinoline C-6), 166.90 (C = O); HRMS (ESI) for C19H20N3O5S: calcd 402.1124, found: 402.1126 [M + H]+.

Ethyl 6-bromo-4-((3-sulphamoylphenyl)amino)quinoline-3-carboxylate (6d)

Yellow solid, yield: 71%, mp: 235.6 − 237.2 °C; 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.07 (t, J = 5.6 Hz, 3H, CH2 CH), 3.88 (q, J = 5.6 Hz, 2H, CHCH3), 7.17 (s, 1H, H-2 of benzenesulfonamide), 7.36 (s, 2H, SO2NH2), 7.45–7.51 (m, 3H, H-4,5,6 of benzenesulfonamide), 7.94 (s, 2H, H-7,8 quinoline), 8.53 (s, 1H, H-5 quinoline), 8.92 (s, 1H, H-2 quinoline), 9.71 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.22 (CH3), 61.49 (CH2), 111.61 (quinoline C-3), 116.40 (benzenesulfonamide C-2), 119.81 (quinoline C-10), 119.95, (benzenesulfonamide C-4), 121.47 (benzenesulfonamide C-6), 123.08 (quinoline C-6), 126.60 (quinoline C-5), 130.21 (benzenesulfonamide C-5), 132.13 (quinoline C-8), 134.76 (quinoline C-7), 144.01 (benzenesulfonamide C-3), 145.68 (benzenesulfonamide C-1), 146.37 (quinoline C-2), 148.91 (quinoline C-9), 152.06 (quinoline C-4), 166.33 (C = O); HRMS (ESI) for C18H17BrN3O4S: calcd 450.0123, found: 450.0127 [M + H]+.

Ethyl 7-chloro-6-fluoro-4-((3-sulphamoylphenyl)amino)quinoline-3-carboxylate (6e)

Yellow solid, yield: 55%, mp: 190.0 − 191.0 °C; 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.08 (t, J = 7.2 Hz, 3H, CH2CH), 3.91 (q, J = 7.2 Hz, 2H, CHCH3), 7.18–7.20 (m, 1H, H-2 of benzenesulfonamide), 7.45–7.49 (m, 3H, H-4,5,6 of benzenesulfonamide), 7.36 (s, 2H, SO2NH2), 8.18 (d, J = 11.2 Hz, H-8 quinoline), 8.25 (d, J = 7.6 Hz, 1H, H-5 quinoline), 8.91 (s, 1H, H-2 quinoline), 9.68 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.22 (CH3), 61.58 (CH2), 110.16, 110.40 (quinoline C-5), 111.47 (quinoline C-3), 116.52 (benzenesulfonamide C-2), 120.18 (quinoline C-10), 121.24 (benzenesulfonamide C-4), 121.85 (quinoline C-10), 125.21 (benzenesulfonamide C-6), 124.41 (benzenesulfonamide C-5), 130.29 (quinoline C-7), 131.58 (quinoline C-8), 143.76 (benzenesulfonamide C-3), 145.69 (benzenesulfonamide C-1), 147.05, 147.52 (quinoline C-6), 152.27 (quinoline C-9), 153.76 (quinoline C-2), 156.21 (quinoline C-4), 166.26 (C = O); HRMS (ESI) for C18H16ClFN3O4S: calcd 424.0534, found: 424.0525 [M + H]+.

Ethyl 5,7-dichloro-4-((3-sulphamoylphenyl)amino)quinoline-3-carboxylate (6f)

Yellow solid, yield: 98%, mp: 228.7 − 230.3 °C; 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.21 (t, J = 7.2 Hz, 3H, CH2CH), 4.17 (q, J = 7.2 Hz, 2H, CHCH3), 6.97–6.99 (m, 1H, H-2 of benzenesulfonamide), 7.28–7.37 (m, 3H, H-4,5,6 of benzenesulfonamide), 7.72 (d, J = 6.0 Hz, 1H, H-6 quinoline), 8.08 (s, 1H, H-8 quinoline), 9.09 (s, 1H, H-2 quinoline), 9.83 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.22 (CH3) 62.08 (CH2), 114.54 (quinoline C-3), 117.87 (benzenesulfonamide C-2), 118.79 (quinoline C-10), 120.52 (benzenesulfonamide C-4), 127.44 (benzenesulfonamide C-6), 129.58 (quinoline C-6), 130.43 (quinoline C-5, 8), 131.42 (benzenesulfonamide C-5), 136.15 (quinoline C-7), 136.62 (benzenesulfonamide C-1), 145.22 (quinoline C-4), 148.09 (quinoline C-9), 152.40 (quinoline C-2), 166.39 (C = O); HRMS (ESI) for C18H16Cl2N3O4S: calcd 440.0239, found: 440.0237 [M + H]+.

Ethyl 7-chloro-6-fluoro-4-((3-(N-methylsulphamoyl)phenyl)amino)quinoline-3-carboxylate (11)

Yellow solid; yield: 40%, 1H NMR (DMSO-d6, 400 MHz) δ ppm: 1.07 (t, J = 6.8 Hz, 3H, CH2CH), 2.40 (s, 3H, NHCH), 3.90 (q, J = 6.8 Hz, 2H, CHCH3), 7.27 (d, J = 7.6 Hz, 1H, H-2 of benzenesulfonamide), 7.41 (s, 1H, NHCH3), 7.49–7.53 (m, 3H, H-4,5,6 of benzenesulfonamide), 8.19 (d, J = 11.6 Hz, 1H, H-5 quinoline), 8.26 (d, J = 7.2 Hz, 1H, H-8 quinoline), 8.91 (s, 1H, H-2 quinoline), 9.79 (s, 1H, NH); 13 C NMR (DMSO-d6, 101 MHz) δ ppm: 14.19 (CH2CH3), 29 (NHCH3), 61.52 (CH2), 110.18 (quinoline C-5), 110.42 (quinoline C-5), 111.56 (quinoline C-3), 117.44 (benzenesulfonamide C-2), 121.17 (benzenesulfonamide C-4), 121.25 (quinoline C-10), 121.33 (quinoline C-10), 122.63 (benzenesulfonamide C-6), 125.22 (quinoline C-7), 125.43 (quinoline C-7), 130.61 (benzenesulfonamide C-5), 131.58 (quinoline C-8), 140.89 (quinoline C-8), 144.09 (benzenesulfonamide C-3), 146.97 (benzenesulfonamide C-1), 147.02 (quinoline C-9), 147.54 (quinoline C-2), 152.26 (quinoline C-4), 153.76 (quinoline C6), 156.21 (quinoline C-6), 166.24 (C = O); HRMS (ESI) for C19H18ClFN3O4S: calcd 438.0691, found: 438.0693 [M + H]+.

CA inhibitory assay

An Applied Photophysics stopped-flow instrument has been used for assaying the CA catalyzed CO2 hydration activity. Phenol red (at a concentration of 0.2 mM) has been used as indicator, working at the absorbance maximum of 557 nm, with 20 mM Hepes (pH 7.5) as buffer, and 20 mM Na2SO4 (for maintaining constant the ionic strength), following the initial rates of the CA-catalyzed CO2 hydration reaction for a period of 10–100 s. The CO2 concentrations ranged from 1.7 to 17 mM for the determination of the kinetic parameters and inhibition constants. For each inhibitor at least six traces of the initial 5–10% of the reaction have been used for determining the initial velocity. The uncatalysed rates were determined in the same manner and subtracted from the total observed rates. Stock solutions of inhibitor (0.1 mM) were prepared in distilled-deionised water and dilutions up to 0.01 nM were done thereafter with the assay buffer. Inhibitor and enzyme solutions were pre-incubated together for 15 min at room temperature prior to assay, in order to allow for the formation of the E-I complex. The inhibition constants were obtained by non-linear least-squares methods using PRISM 3 and the Cheng-Prusoff equation, as reported earlier and represent the mean from at least three different determinations.

Results and discussion

The methods adopted for synthesis of the target quinolines 6a–f and 11 are depicted in Schemes 1 and 2. Firstly, anilines 1a–f were heated with diethyl ethoxymethylenemalonate in refluxing ethanol to furnish diethyl 2-((phenylamino)methylene)malonate derivatives 2a–f which thermally cyclised to the corresponding ethyl 4-oxo-1,4-dihydroquinoline-3-carboxylates 3a–f via heating in diphenyl ether. Next, chlorination of quinolinones 3a–f was carried out under anhydrous condition through heating with excess of phosphorus oxychloride to afford the key intermediates ethyl 4-chloroquinoline-3-carboxylates 4a–f. The target primary 3-(quinolin-4-ylamino)benzenesulfonamides 6a–f were obtained through a MW assisted nucleophilic substitution reaction of 3-aminobenzenesulfonamide 5 with the appropriate key intermediate 4a–f in ethyl alcohol (Scheme 1).
Scheme 1.

Synthesis of target quinolines 6a–f; Reagents and conditions: (i) DEEMM/Ethanol/reflux 1 h; (ii) Diphenyl ether/250 °C/45 min; (iii) POCl3/reflux 1 h; (iv) Absolute ethyl alcohol/reflux 4 h.

Synthesis of target quinolines 6a–f; Reagents and conditions: (i) DEEMM/Ethanol/reflux 1 h; (ii) Diphenyl ether/250 °C/45 min; (iii) POCl3/reflux 1 h; (iv) Absolute ethyl alcohol/reflux 4 h. In Scheme 2, 3-amino-N-methylbenzenesulfonamide 10 was prepared as reported earlier through a nucleophilic substitution for 3-nitrobenzenesulphonyl chloride 7 with methylamine, followed by a catalytic hydrogenation to the nitro function. The later reacted with the key intermediate 4e in refluxing ethanol to afford the target secondary benzenesulfonamide 11 (Scheme 2).
Scheme 2.

Synthesis of target quinoline 11; Reagents and conditions: (i) Hunig's Base/THF/stirring at r.t./1 h; (ii) H2/10% Pd/C/MeOH/r.t.; (iii) Compound 4e/Absolute ethyl alcohol/reflux 4 h.

Synthesis of target quinoline 11; Reagents and conditions: (i) Hunig's Base/THF/stirring at r.t./1 h; (ii) H2/10% Pd/C/MeOH/r.t.; (iii) Compound 4e/Absolute ethyl alcohol/reflux 4 h. The structures of the newly prepared quinolines 6a–f and 11 were confirmed and elucidated by NMR spectroscopy and high resolution mass spectroscopy, which were in full agreement with the postulated structures (Supplementary material). 1H NMR spectra of quinolines 6a-f showed new characteristic signals at δ 7.33– 7.37 ppm, and 9.68–10.25 ppm corresponding to NH2 and NH groups, respectively, that distinguished the target quinolines 6a-f from the key intermediates chloroquinolines 4a-f. Also, the 1H NMR of 7-chloro-6-fluoro-4–(3-methanesulphonylaminophenyamino)-quinoline-3-carboxylic acid ethyl ester (11) displayed three significant signals at δ 2.99, 9.63 and 9.79 ppm assigned to -NHCH3, -SO2NH- and -NH- protons, respectively.

Biological evaluation

Carbonic anhydrase inhibition

The newly prepared 3-(quinolin-4-ylamino)benzenesulfonamides 6a–f and 11 were evaluated for their ability to inhibit the physiologically relevant hCA cytosolic isoforms, hCA I and II, by a stopped-flow CO2 hydrase assay. The inhibition data of the prepared quinolines and the sulfonamide acetazolamide AAZ (as a standard inhibitor) against the two examined isoforms are summarised in Table 1. The following structure-activity relationship (SAR) could be noted regarding the inhibition data reported in Table 1:
Table 1.

Inhibition data of human CA isoforms hCA I and II for quinolines 6a–f and 11, determined by stopped-flow CO2 hydrase assay, using acetazolamide (AAZ) as a standard drug.

Comp.RKI (nM)*
hCA IhCA II
6aH4233.2223.4
6b6-CH36644.4782.3
6c6-OCH3966.0175.4
6d6-Br9091.73594.8
6e7-Cl-6-F7604.683.3
6f5,7-(Cl)2>10000>10000
11>10000>10000
AAZ250.012.0

Mean from three different assays, by a stopped flow technique (errors were in the range of ± 5–10% of the reported values).

Inhibition data of human CA isoforms hCA I and II for quinolines 6a–f and 11, determined by stopped-flow CO2 hydrase assay, using acetazolamide (AAZ) as a standard drug. Mean from three different assays, by a stopped flow technique (errors were in the range of ± 5–10% of the reported values). The secondary sulfonamide reported here (11) failed to inhibit the tested hCA isoforms (hCA I and hCA II) up to 10 μM, which confirmed the crucial role of the primary sulfonamide as a zinc-anchoring group, with the additional two hydrogen bonds with Thr199 and Thr200 residues within the enzyme active site. The data presented in Table 1 ascribed to the prepared primary sulfonamides (6a-6e) weak potency in inhibiting the ubiquitous cytosolic isoform hCA I with inhibition constants (KIs) in the micromolar range, in detail, between 4.233 and 9.091 μM, except for the 6-methoxy substituted analog 6c which arose as a submicromolar hCA I inhibitor with a KI equals 0.966 μM, which represents 3.8-fold decreased efficacy to the reference drug AAZ (KI equals 0.250 μM towards hCA I). On contrary, the 5,7-dichloro substituted primary sulfonamide 6f failed to inhibit the hCA I up to 10 μM. Noteworthy, the SAR outcomes highlighted that grafting the strong electron-donating 6-metoxy group (compound 6c; KI = 0.966 μM) resulted in 4.4-fold efficacy enhancement in comparison to the unsubstituted analogue 6a (KI = 4.233 μM). Regarding the impact of substitution of the quinoline moiety within the primary sulfonamides series 6a-6f; the inhibitory activities were decreased in the order of 6-OCH3 >6-CH3 >7-Cl-6-F > 6-Br >5,7-(Cl)2. The second ubiquitous cytosolic isoform examined here was hCA II. It was apparent from the displayed results (Table 1) that the tested primary sulfonamides (6a-6e) effectively interfere with hCA II catalytic activities in submicromolar/micromolar concentration range (KI values of 0.083 – 3.594 μM), whereas, no significant inhibition towards hCA II was revealed for quinoline 6f (KI >10 μM). Nevertheless, among the tested quinolines, 7-chloro-6-flouro substituted compound 6e (KI = 0.083 μM) proved to be the most active quinoline in inhibiting hCA II. Moreover, grafting a 6-methoxy group within the quinoline scaffold (compound 6c; KI = 0.083 μM) was advantageous for the inhibitory activity toward hCA II, similarly to the SAR for hCA I inhibition. Regarding the substitution effect for the quinoline moiety; the inhibitory activities towards hCA II were decreased in the order of 7-Cl-6-F > 6-OCH3 > 6-CH3 > 6-Br > 5,7-(Cl)2.

Conclusion

In summary, we successfully synthesised new benzenesulfonamides, bearing un/substituted ethyl quinoline-3-carboxylate scaffold (6a-f and 11), which were evaluated for their inhibition of hCA I and hCA II. Both the examined isoforms were inhibited by the quinolines reported here in variable degrees; hCA I was inhibited with KIs in the range of 0.966–9.091 μM, whereas hCA II in the range of 0.083–3.594 μM. Among the tested compounds, the primary 7-chloro-6-flouro substituted sulfonamide derivative 6e (KI = 0.083 μM) proved to be the most active quinoline in inhibiting hCA II, whereas, its secondary sulfonamide analogue 11 failed to inhibit the hCA II up to 10 μM, confirming the crucial role of the primary sulphonamido group, as a ZBG, for CA inhibitory activity.
  68 in total

Review 1.  Carbonic anhydrase inhibitors.

Authors:  Claudiu T Supuran
Journal:  Bioorg Med Chem Lett       Date:  2010-06-15       Impact factor: 2.823

2.  Selective hydrophobic pocket binding observed within the carbonic anhydrase II active site accommodate different 4-substituted-ureido-benzenesulfonamides and correlate to inhibitor potency.

Authors:  Fabio Pacchiano; Mayank Aggarwal; Balendu Sankara Avvaru; Arthur H Robbins; Andrea Scozzafava; Robert McKenna; Claudiu T Supuran
Journal:  Chem Commun (Camb)       Date:  2010-10-05       Impact factor: 6.222

3.  Carbonic anhydrase inhibitors: synthesis of water-soluble, topically effective intraocular pressure lowering aromatic/heterocyclic sulfonamides containing 8-quinoline-sulfonyl moieties: is the tail more important than the ring?

Authors:  J Borras; A Scozzafava; L Menabuoni; F Mincione; F Briganti; G Mincione; C T Supuran
Journal:  Bioorg Med Chem       Date:  1999-11       Impact factor: 3.641

4.  Saccharin inhibits carbonic anhydrases: possible explanation for its unpleasant metallic aftertaste.

Authors:  Karen Köhler; Alexander Hillebrecht; Johannes Schulze Wischeler; Alessio Innocenti; Andreas Heine; Claudiu T Supuran; Gerhard Klebe
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

Review 5.  Carbonic anhydrases: novel therapeutic applications for inhibitors and activators.

Authors:  Claudiu T Supuran
Journal:  Nat Rev Drug Discov       Date:  2008-02       Impact factor: 84.694

6.  Carbonic anhydrase inhibitors: inhibition of mammalian isoforms I-XIV with a series of substituted phenols including paracetamol and salicylic acid.

Authors:  Alessio Innocenti; Daniela Vullo; Andrea Scozzafava; Claudiu T Supuran
Journal:  Bioorg Med Chem       Date:  2008-06-13       Impact factor: 3.641

7.  Synthesis and biological evaluation of naphthoquinone analogs as a novel class of proteasome inhibitors.

Authors:  Harshani R Lawrence; Aslamuzzaman Kazi; Yunting Luo; Robert Kendig; Yiyu Ge; Sanjula Jain; Kenyon Daniel; Daniel Santiago; Wayne C Guida; Saïd M Sebti
Journal:  Bioorg Med Chem       Date:  2010-06-18       Impact factor: 3.641

Review 8.  Carbonic anhydrases: current state of the art, therapeutic applications and future prospects.

Authors:  Silvia Pastorekova; Seppo Parkkila; Jaromir Pastorek; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2004-06       Impact factor: 5.051

9.  Carbonic anhydrase inhibitors: clash with Ala65 as a means for designing inhibitors with low affinity for the ubiquitous isozyme II, exemplified by the crystal structure of the topiramate sulfamide analogue.

Authors:  Jean-Yves Winum; Claudia Temperini; Khaled El Cheikh; Alessio Innocenti; Daniela Vullo; Samuele Ciattini; Jean-Louis Montero; Andrea Scozzafava; Claudiu T Supuran
Journal:  J Med Chem       Date:  2006-11-30       Impact factor: 7.446

Review 10.  Designing of novel carbonic anhydrase inhibitors and activators.

Authors:  Claudiu T Supuran; Daniela Vullo; Gheorghe Manole; Angela Casini; Andrea Scozzafava
Journal:  Curr Med Chem Cardiovasc Hematol Agents       Date:  2004-01
View more
  9 in total

1.  Design, synthesis and molecular docking of new fused 1H-pyrroles, pyrrolo[3,2-d]pyrimidines and pyrrolo[3,2-e][1, 4]diazepine derivatives as potent EGFR/CDK2 inhibitors.

Authors:  Amany Belal; Nagwa M Abdel Gawad; Ahmed B M Mehany; Mohammed A S Abourehab; Hazem Elkady; Ahmed A Al-Karmalawy; Ahmed S Ismael
Journal:  J Enzyme Inhib Med Chem       Date:  2022-12       Impact factor: 5.756

2.  Uracil as a Zn-Binding Bioisostere of the Allergic Benzenesulfonamide in the Design of Quinoline-Uracil Hybrids as Anticancer Carbonic Anhydrase Inhibitors.

Authors:  Samar A El-Kalyoubi; Ehab S Taher; Tarek S Ibrahim; Mohammed Farrag El-Behairy; Amany M M Al-Mahmoudy
Journal:  Pharmaceuticals (Basel)       Date:  2022-04-19

3.  Discovery of 4-alkoxy-2-aryl-6,7-dimethoxyquinolines as a new class of topoisomerase I inhibitors endowed with potent in vitro anticancer activity.

Authors:  Mostafa M Elbadawi; Wagdy M Eldehna; Wenjie Wang; Keli K Agama; Yves Pommier; Manabu Abe
Journal:  Eur J Med Chem       Date:  2021-02-09       Impact factor: 7.088

4.  Novel benzofuran-based sulphonamides as selective carbonic anhydrases IX and XII inhibitors: synthesis and in vitro biological evaluation.

Authors:  Mohamed A Abdelrahman; Wagdy M Eldehna; Alessio Nocentini; Hany S Ibrahim; Hadia Almahli; Hatem A Abdel-Aziz; Sahar M Abou-Seri; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2020-12       Impact factor: 5.051

5.  A New CDK2 Inhibitor with 3-Hydrazonoindolin-2-One Scaffold Endowed with Anti-Breast Cancer Activity: Design, Synthesis, Biological Evaluation, and In Silico Insights.

Authors:  Mohammad M Al-Sanea; Ahmad J Obaidullah; Mohamed E Shaker; Garri Chilingaryan; Mohammed M Alanazi; Nawaf A Alsaif; Hamad M Alkahtani; Sultan A Alsubaie; Mohamed A Abdelgawad
Journal:  Molecules       Date:  2021-01-14       Impact factor: 4.411

6.  Topo II inhibition and DNA intercalation by new phthalazine-based derivatives as potent anticancer agents: design, synthesis, anti-proliferative, docking, and in vivo studies.

Authors:  Mohamed M Khalifa; Ahmed A Al-Karmalawy; Eslam B Elkaeed; Mohamed S Nafie; Mohamed A Tantawy; Ibrahim H Eissa; Hazem A Mahdy
Journal:  J Enzyme Inhib Med Chem       Date:  2022-12       Impact factor: 5.051

7.  Development of Novel Quinoline-Based Sulfonamides as Selective Cancer-Associated Carbonic Anhydrase Isoform IX Inhibitors.

Authors:  Moataz Shaldam; Alessio Nocentini; Zainab M Elsayed; Tamer M Ibrahim; Rofaida Salem; Ramadan A El-Domany; Clemente Capasso; Claudiu T Supuran; Wagdy M Eldehna
Journal:  Int J Mol Sci       Date:  2021-10-15       Impact factor: 5.923

8.  Synthesis and biological evaluation of small molecule modulators of CDK8/Cyclin C complex with phenylaminoquinoline scaffold.

Authors:  Mohammad M Al-Sanea
Journal:  PeerJ       Date:  2020-03-13       Impact factor: 2.984

9.  The antibiotic furagin and its derivatives are isoform-selective human carbonic anhydrase inhibitors.

Authors:  Aleksandrs Pustenko; Alessio Nocentini; Paola Gratteri; Alessandro Bonardi; Igor Vozny; Raivis Žalubovskis; Claudiu T Supuran
Journal:  J Enzyme Inhib Med Chem       Date:  2020-12       Impact factor: 5.051

  9 in total

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