Literature DB >> 31407120

White Matter Segmentation Algorithm for DTI Images Based on Super-Pixel Full Convolutional Network.

Yiping Mu1, Qi Li2, Yang Zhang2.   

Abstract

Diffusion tensor imaging (DTI) is a new imaging method that can be used to non-invasively measure the diffusion coefficient of water molecules in biological tissue structures in recent years. Since the DTI data is a tensor space, its segmentation is different from ordinary MRI images. Based on the existing deep learning model, an improved image semantic segmentation method based on super-pixels and conditional random field is proposed. Firstly, this paper uses the existing feature extraction model based on deep learning to obtain rough semantic segmentation results, including high-level semantic information of the image but lacking details of the image. In addition, the super-pixel segmentation algorithm is implemented to obtain super-pixels that carries more low-level information. Secondly, due to the lack of image details in rough segmentation results, the segmentation of the edge of the image is inaccurate. In this paper, a boundary optimization algorithm is proposed to optimize the edge segmentation accuracy of the rough results. Finally, the use of super-pixels for local boundary optimization can improve the segmentation accuracy. Experiments results show that this segment is a practical and effective method.

Entities:  

Keywords:  Boundary optimization; Deep learning; Diffusion tensor imaging; Full convolutional network; Rough segmentation; Super-pixel segmentation

Mesh:

Year:  2019        PMID: 31407120     DOI: 10.1007/s10916-019-1431-1

Source DB:  PubMed          Journal:  J Med Syst        ISSN: 0148-5598            Impact factor:   4.460


  24 in total

1.  Probabilistic segmentation of white matter lesions in MR imaging.

Authors:  Petronella Anbeek; Koen L Vincken; Matthias J P van Osch; Robertus H C Bisschops; Jeroen van der Grond
Journal:  Neuroimage       Date:  2004-03       Impact factor: 6.556

2.  White matter fiber tract segmentation in DT-MRI using geometric flows.

Authors:  Lisa Jonasson; Xavier Bresson; Patric Hagmann; Olivier Cuisenaire; Reto Meuli; Jean-Philippe Thiran
Journal:  Med Image Anal       Date:  2005-06       Impact factor: 8.545

3.  [Segmentation of the white matter in the brain based on MR-DTI fiber directions].

Authors:  Uwe Klose; Michael Erb; Ralf Saur; Uwe Seeger; Wolfgang Grodd
Journal:  Z Med Phys       Date:  2005       Impact factor: 4.820

4.  Diffusion tensor imaging segmentation of white matter structures using a Reproducible Objective Quantification Scheme (ROQS).

Authors:  Sumit N Niogi; Pratik Mukherjee; Bruce D McCandliss
Journal:  Neuroimage       Date:  2007-01-04       Impact factor: 6.556

5.  Atlas-based segmentation of white matter tracts of the human brain using diffusion tensor tractography and comparison with classical dissection.

Authors:  I Nigel C Lawes; Thomas R Barrick; Vengadasalam Murugam; Natalia Spierings; David R Evans; Marie Song; Chris A Clark
Journal:  Neuroimage       Date:  2007-08-07       Impact factor: 6.556

6.  Automated segmentation and measurement of global white matter lesion volume in patients with multiple sclerosis.

Authors:  B Alfano; A Brunetti; M Larobina; M Quarantelli; E Tedeschi; A Ciarmiello; E M Covelli; M Salvatore
Journal:  J Magn Reson Imaging       Date:  2000-12       Impact factor: 4.813

7.  Belief propagation based segmentation of white matter tracts in DTI.

Authors:  Pierre-Louis Bazin; John Bogovic; Daniel Reich; Jerry L Prince; Dzung L Pham
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

8.  Computer-assisted segmentation of white matter lesions in 3D MR images using support vector machine.

Authors:  Zhiqiang Lao; Dinggang Shen; Dengfeng Liu; Abbas F Jawad; Elias R Melhem; Lenore J Launer; R Nick Bryan; Christos Davatzikos
Journal:  Acad Radiol       Date:  2008-03       Impact factor: 3.173

9.  New multispectral MRI data fusion technique for white matter lesion segmentation: method and comparison with thresholding in FLAIR images.

Authors:  Maria del C Valdés Hernández; Karen J Ferguson; Francesca M Chappell; Joanna M Wardlaw
Journal:  Eur Radiol       Date:  2010-02-16       Impact factor: 5.315

10.  Automatic tractography segmentation using a high-dimensional white matter atlas.

Authors:  Lauren J O'Donnell; Carl-Fredrik Westin
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

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  2 in total

1.  Diffusion Tensor Imaging Features of Watershed Segmentation Algorithm for Analysis of the Relationship between Depression and Brain Nerve Function of Patients with End-Stage Renal Disease.

Authors:  Feng Zhu; Jiao Xu; Mei Yang; Haitao Chi
Journal:  J Healthc Eng       Date:  2021-10-25       Impact factor: 2.682

2.  The efficacy of Rhodiola Rosea based on DTI image Segmentation Algorithm for patients with delayed Encephalopathy caused by CO poisoning.

Authors:  Yuming Gao; Haitao Cui; Wei Ren; Bing Han
Journal:  Pak J Med Sci       Date:  2021       Impact factor: 1.088

  2 in total

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