Literature DB >> 20426079

Belief propagation based segmentation of white matter tracts in DTI.

Pierre-Louis Bazin1, John Bogovic, Daniel Reich, Jerry L Prince, Dzung L Pham.   

Abstract

This paper presents a belief propagation approach to the segmentation of the major white matter tracts in diffusion tensor images of the human brain. Unlike tractography methods that sample multiple fibers to be bundled together, we define a Markov field directly on the diffusion tensors to separate the main fiber tracts at the voxel level. A prior model of shape and direction guides a full segmentation of the brain into known fiber tracts; additional, unspecified fibers; and isotropic regions. The method is evaluated on various data sets from an atlasing project, healthy subjects, and multiple sclerosis patients.

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Year:  2009        PMID: 20426079      PMCID: PMC3222844          DOI: 10.1007/978-3-642-04268-3_116

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  12 in total

Review 1.  Diffusion tensor imaging: concepts and applications.

Authors:  D Le Bihan; J F Mangin; C Poupon; C A Clark; S Pappata; N Molko; H Chabriat
Journal:  J Magn Reson Imaging       Date:  2001-04       Impact factor: 4.813

Review 2.  Fiber tracking: principles and strategies - a technical review.

Authors:  Susumu Mori; Peter C M van Zijl
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

Review 3.  Diffusion-tensor MRI: theory, experimental design and data analysis - a technical review.

Authors:  Peter J Basser; Derek K Jones
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

4.  Probabilistic Monte Carlo based mapping of cerebral connections utilising whole-brain crossing fibre information.

Authors:  Geoff J M Parker; Daniel C Alexander
Journal:  Inf Process Med Imaging       Date:  2003-07

5.  DTI segmentation by statistical surface evolution.

Authors:  Christophe Lenglet; Mikaël Rousson; Rachid Deriche
Journal:  IEEE Trans Med Imaging       Date:  2006-06       Impact factor: 10.048

6.  Convergent tree-reweighted message passing for energy minimization.

Authors:  Vladimir Kolmogorov
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-10       Impact factor: 6.226

7.  A volumetric approach to quantifying region-to-region white matter connectivity in diffusion tensor MRI.

Authors:  P Thomas Fletcher; Ran Tao; Won-Ki Jeong; Ross T Whitaker
Journal:  Inf Process Med Imaging       Date:  2007

8.  Reproducibility of quantitative tractography methods applied to cerebral white matter.

Authors:  Setsu Wakana; Arvind Caprihan; Martina M Panzenboeck; James H Fallon; Michele Perry; Randy L Gollub; Kegang Hua; Jiangyang Zhang; Hangyi Jiang; Prachi Dubey; Ari Blitz; Peter van Zijl; Susumu Mori
Journal:  Neuroimage       Date:  2007-03-20       Impact factor: 6.556

9.  Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template.

Authors:  Susumu Mori; Kenichi Oishi; Hangyi Jiang; Li Jiang; Xin Li; Kazi Akhter; Kegang Hua; Andreia V Faria; Asif Mahmood; Roger Woods; Arthur W Toga; G Bruce Pike; Pedro Rosa Neto; Alan Evans; Jiangyang Zhang; Hao Huang; Michael I Miller; Peter van Zijl; John Mazziotta
Journal:  Neuroimage       Date:  2008-01-03       Impact factor: 6.556

10.  Automated fiber tracking of human brain white matter using diffusion tensor imaging.

Authors:  Weihong Zhang; Alessandro Olivi; Samuel J Hertig; Peter van Zijl; Susumu Mori
Journal:  Neuroimage       Date:  2008-04-30       Impact factor: 6.556

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  3 in total

1.  Direct segmentation of the major white matter tracts in diffusion tensor images.

Authors:  Pierre-Louis Bazin; Chuyang Ye; John A Bogovic; Navid Shiee; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2011-06-21       Impact factor: 6.556

2.  White Matter Segmentation Algorithm for DTI Images Based on Super-Pixel Full Convolutional Network.

Authors:  Yiping Mu; Qi Li; Yang Zhang
Journal:  J Med Syst       Date:  2019-08-12       Impact factor: 4.460

3.  Automated vs. conventional tractography in multiple sclerosis: variability and correlation with disability.

Authors:  Daniel S Reich; Arzu Ozturk; Peter A Calabresi; Susumu Mori
Journal:  Neuroimage       Date:  2009-11-26       Impact factor: 6.556

  3 in total

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