Literature DB >> 31406397

Comparison between different methods of DNA isolation from dried blood spots for determination of malaria to determine specificity and cost effectiveness.

Barsa Baisalini Panda1, Arup Shankar Meher1,2, Rupenangshu Kumar Hazra1.   

Abstract

DNA extraction from filter paper by using different methods was compiled through a thorough review of many research articles published in various journals. When performing malaria epidemiological surveys in remote area, it is difficult to collect blood samples and transport it. In field particularly in remote area where facilities for storing and processing of samples does not exist, there surveillance and diagnosis of malaria is very difficult. In this review we are focused upon four simple methods of DNA isolation from the field collected blood and mosquito abdomen blood meal spotted on Whatman No. 1 or No. 3 filter paper. The main DNA isolation methods are Chelex-100, Tris-EDTA (TE) buffer; Methanol based DNA extraction and Phosphate buffer saline (PBS) using Lysis buffer and Phenol-Chloroform method. Efforts have been taken to identify the methods which are cost-effective and take less time to extract DNA from dried blood spots (DBS) and whole mosquitoes. The purpose of this paper is to update the knowledge and find a method to extract DNA from DBS which will be specific, rapid, cost-effective, less time consuming and feasible for epidemiological survey in remote area.

Entities:  

Keywords:  Chelex-100; Extraction; Methanol; PBS; TE-Buffer

Year:  2019        PMID: 31406397      PMCID: PMC6667532          DOI: 10.1007/s12639-019-01136-0

Source DB:  PubMed          Journal:  J Parasit Dis        ISSN: 0971-7196


  33 in total

Review 1.  The use of the dried blood spot sample in epidemiological studies.

Authors:  S P Parker; W D Cubitt
Journal:  J Clin Pathol       Date:  1999-09       Impact factor: 3.411

2.  History and development of antimicrobial susceptibility testing methodology.

Authors:  P F Wheat
Journal:  J Antimicrob Chemother       Date:  2001-07       Impact factor: 5.790

3.  Simple and reliable method for detection and genotyping of hepatitis C virus RNA in dried blood spots stored at room temperature.

Authors:  Mariacarmela Solmone; Enrico Girardi; Francesco Costa; Leopoldo Pucillo; Giuseppe Ippolito; Maria R Capobianchi
Journal:  J Clin Microbiol       Date:  2002-09       Impact factor: 5.948

4.  PCR detection of dengue virus using dried whole blood spotted on filter paper.

Authors:  Irina Prado; Delfina Rosario; Lídice Bernardo; Mayling Alvarez; Rosmari Rodríguez; Susana Vázquez; María G Guzmán
Journal:  J Virol Methods       Date:  2005-04       Impact factor: 2.014

5.  Short report: Rapid DNA extraction from archive blood spots on filter paper for genotyping of Plasmodium falciparum.

Authors:  Sándor Bereczky; Andreas Mårtensson; J Pedro Gil; Anna Färnert
Journal:  Am J Trop Med Hyg       Date:  2005-03       Impact factor: 2.345

6.  Comparison of five DNA extraction methods and optimization of a b1 gene nested PCR (nPCR) for detection of Toxoplasma gondii tissue cyst in mouse brain.

Authors:  Aongart Mahittikorn; Hannes Wickert; Yaowalark Sukthana
Journal:  Southeast Asian J Trop Med Public Health       Date:  2005-11       Impact factor: 0.267

7.  Comparison of field and expert laboratory microscopy for active surveillance for asymptomatic Plasmodium falciparum and Plasmodium vivax in western Thailand.

Authors:  Russell E Coleman; Nongnuj Maneechai; Nattawan Rachaphaew; Chalermpol Kumpitak; R Scott Miller; Virat Soyseng; Krongthong Thimasarn; Jetsumon Sattabongkot
Journal:  Am J Trop Med Hyg       Date:  2002-08       Impact factor: 2.345

8.  Detection of atovaquone and Malarone resistance conferring mutations in Plasmodium falciparum cytochrome b gene (cytb).

Authors:  J P Gil; F Nogueira; J Strömberg-Nörklit; J Lindberg; M Carrolo; C Casimiro; D Lopes; A P Arez; P V Cravo; V E Rosário
Journal:  Mol Cell Probes       Date:  2003 Apr-Jun       Impact factor: 2.365

9.  Determination of genetic variation within Plasmodium falciparum by using enzymatically amplified DNA from filter paper disks impregnated with whole blood.

Authors:  K C Kain; D E Lanar
Journal:  J Clin Microbiol       Date:  1991-06       Impact factor: 5.948

10.  Assessing quality and functionality of DNA from fresh and archival dried blood spots and recommendations for quality control guidelines.

Authors:  Malin Ida Linnea Sjöholm; Joakim Dillner; Joyce Carlson
Journal:  Clin Chem       Date:  2007-06-22       Impact factor: 8.327

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  3 in total

1.  Preservation and Extraction of Malaria Parasite DNA from Dried Blood Spots.

Authors:  Helle Hansson; Queen Saidi; Michael Alifrangis
Journal:  Methods Mol Biol       Date:  2022

2.  Development of a Simple DNA Extraction Method and Candida Pan Loop-Mediated Isothermal Amplification Assay for Diagnosis of Candidemia.

Authors:  Da Hye Lim; Hyunseul Jee; Kyung Chul Moon; Chae Seung Lim; Woong Sik Jang
Journal:  Pathogens       Date:  2022-01-18

3.  An algorithm based on molecular protocols to improve the detection of Plasmodium in autochthonous malarial areas in the Atlantic Forest biome.

Authors:  Maria de Lourdes Rego Neves Farinas; Mariana Aschar; Maria de Jesus Costa-Nascimento; Silvia Maria Di Santi
Journal:  Rev Inst Med Trop Sao Paulo       Date:  2022-02-25       Impact factor: 1.846

  3 in total

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