Literature DB >> 3139407

The finger motif defines a multigene family represented in the maternal mRNA of Xenopus laevis oocytes.

M Köster1, T Pieler, A Pöting, W Knöchel.   

Abstract

We have screened Xenopus laevis cDNA and genomic libraries for finger motif encoding sequences by use of a synthetic oligonucleotide probe coding for a stretch of conserved amino acids, the H/C-link, which joins individual finger loops in several multi-fingered proteins. Our studies reveal that a large number of different cDNA clones encode amino acid sequences predicting multiple units of the metal-coordinating finger structure. Derived proteins are different from each other as well as from the two examples of Xenopus finger proteins reported to date, TFIIIA and X.fin. The 109 finger repeats characterized are derived from 14 different cDNA clones and have been analysed for the presence of conserved and highly variable amino acids, revealing a close structural relatedness among each other as well as with a few selected finger domains from Drosophila and mouse proteins. The results from this comparative sequence analysis are also discussed in terms of the existing models for DNA binding. All sequences are identified in an ovary cDNA library but the patterns of mRNA level for individual finger clones vary greatly during early development. The prevalence of these structures in the oocyte suggests that part of the maternal information for the realization of the developmental program utilized in Xenopus embryogenesis might be transmitted in the form of regulatory, nucleic-acid-binding proteins.

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Year:  1988        PMID: 3139407      PMCID: PMC457161          DOI: 10.1002/j.1460-2075.1988.tb03002.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  22 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes.

Authors:  D R Engelke; S Y Ng; B S Shastry; R G Roeder
Journal:  Cell       Date:  1980-03       Impact factor: 41.582

3.  Xenopus 5S gene transcription factor, TFIIIA: characterization of a cDNA clone and measurement of RNA levels throughout development.

Authors:  A M Ginsberg; B O King; R G Roeder
Journal:  Cell       Date:  1984-12       Impact factor: 41.582

4.  A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.

Authors:  J Messing; J Vieira
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

5.  A homologous protein-coding sequence in Drosophila homeotic genes and its conservation in other metazoans.

Authors:  W McGinnis; R L Garber; J Wirz; A Kuroiwa; W J Gehring
Journal:  Cell       Date:  1984-06       Impact factor: 41.582

6.  A specific transcription factor that can bind either the 5S RNA gene or 5S RNA.

Authors:  H R Pelham; D D Brown
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

Review 7.  Gene transfer in amphibian eggs and oocytes.

Authors:  J B Gurdon; D A Melton
Journal:  Annu Rev Genet       Date:  1981       Impact factor: 16.830

8.  A membrane-filter technique for the detection of complementary DNA.

Authors:  D T Denhardt
Journal:  Biochem Biophys Res Commun       Date:  1966-06-13       Impact factor: 3.575

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes.

Authors:  J Miller; A D McLachlan; A Klug
Journal:  EMBO J       Date:  1985-06       Impact factor: 11.598

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  19 in total

1.  The evolutionarily conserved Krüppel-associated box domain defines a subfamily of eukaryotic multifingered proteins.

Authors:  E J Bellefroid; D A Poncelet; P J Lecocq; O Revelant; J A Martial
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

2.  Differential binding of zinc fingers from Xenopus TFIIIA and p43 to 5S RNA and the 5S RNA gene.

Authors:  M K Darby; K E Joho
Journal:  Mol Cell Biol       Date:  1992-07       Impact factor: 4.272

3.  Members of the zinc finger protein gene family sharing a conserved N-terminal module.

Authors:  M Rosati; M Marino; A Franzè; A Tramontano; G Grimaldi
Journal:  Nucleic Acids Res       Date:  1991-10-25       Impact factor: 16.971

4.  RNA binding properties and evolutionary conservation of the Xenopus multifinger protein Xfin.

Authors:  M Andreazzoli; S De Lucchini; M Costa; G Barsacchi
Journal:  Nucleic Acids Res       Date:  1993-09-11       Impact factor: 16.971

5.  Target Detection Assay (TDA): a versatile procedure to determine DNA binding sites as demonstrated on SP1 protein.

Authors:  H J Thiesen; C Bach
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

6.  Presence of multiple species of polypeptides immunologically related to transcription factor TFIIIA in adult Xenopus tissues.

Authors:  W Yasui; M Ryoji
Journal:  Nucleic Acids Res       Date:  1989-07-25       Impact factor: 16.971

7.  Proteins of the Xenopus laevis zinc finger multigene family as targets for CK II phosphorylation.

Authors:  B Klocke; W Knöchel
Journal:  Mol Cell Biochem       Date:  1995-01-12       Impact factor: 3.396

8.  Mouse genes coding for "zinc-finger"-containing proteins: characterization and expression in differentiated cells.

Authors:  C Passananti; A Felsani; M Caruso; P Amati
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

9.  Gene structure and alternative splicing of XFG 5-1, a X. laevis Zn finger protein with RNA homopolymer binding activity.

Authors:  M Köster; S Hille; T Pieler; W Knöchel
Journal:  Mol Biol Rep       Date:  1993-10       Impact factor: 2.316

Review 10.  Genetic control of development in Xenopus laevis.

Authors:  R Vignali; S De Lucchini; B Kablar; G Barsacchi
Journal:  Genetica       Date:  1994       Impact factor: 1.082

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