Literature DB >> 31392024

Crystal structure of hexa-μ-chlorido-μ4-oxido-tetra-kis-{[1-(2-hy-droxy-eth-yl)-2-methyl-5-nitro-1H-imidazole-κN 3]copper(II)} containing short NO2⋯NO2 contacts.

Ja-Shin Wu1, Daniel G Shlian2, Joshua H Palmer2, Rita K Upmacis3.   

Abstract

The title tetra-nuclear copper complex, [Cu4Cl6O(C6H9N3O3)4] or [Cu4Cl6O-(MET)4] [MET is 1-(2-hy-droxy-eth-yl)-2-methyl-5-nitro-1H-imidazole or metronidazole], contains a tetra-hedral arrangement of copper(II) ions. Each copper atom is also linked to the other three copper atoms in the tetra-hedron via bridging chloride ions. A fifth coordination position on each metal atom is occupied by a nitro-gen atom of the monodentate MET ligand. The result is a distorted CuCl3NO trigonal-bipyramidal coordination polyhedron with the axial positions occupied by oxygen and nitro-gen atoms. The extended structure displays O-H⋯O hydrogen bonding, as well as unusual short O⋯N inter-actions [2.775 (4) Å] between the nitro groups of adjacent clusters that are oriented perpendicular to each other. The scattering contribution of disordered water and methanol solvent mol-ecules was removed using the SQUEEZE procedure [Spek (2015 ▸). Acta Cryst. C71, 9-16] in PLATON [Spek (2009 ▸). Acta Cryst. D65, 148-155].

Entities:  

Keywords:  NO2 Inter­actions; bridging chloride; crystal structure; metronidazole; tetra­nuclear copper

Year:  2019        PMID: 31392024      PMCID: PMC6659319          DOI: 10.1107/S2056989019008570

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Metronidazole (C6H9N3O3; MET) is a medication that was discovered to be effective against both bacteria and parasites more than 50 years ago (Samuelson, 1999 ▸). MET is currently incorporated in the World Health Organization (WHO) list of essential medicines, i.e. medications that are considered to be effective and safe to meet the most important needs in a health system (WHO, 2015 ▸). Despite the widespread use of MET as a drug, relatively little structural data concerning its inter­actions with metal ions exist, and there are few structurally characterized copper compounds of MET (Galván-Tejada et al., 2002 ▸; Barba-Behrens et al., 1991 ▸; Athar et al., 2005 ▸; Ratajczak-Sitarz et al., 1998 ▸; Bharti et al., 2002 ▸). Our recent work has sought to develop further metal–MET chemistry and we have reported structures containing Cu (Palmer et al., 2015 ▸; Quinlivan & Upmacis, 2016 ▸), as well as Ag (Palmer & Upmacis, 2015 ▸) and Au (Quinlivan et al., 2015 ▸). Tetra­nuclear copper(II) compounds of the form [Cu4OX 6 L 4] are relatively well known, with the first example described in 1996 (Bertrand & Kelley, 1966 ▸). In this regard, although the structure of a [Cu4OX 6 L 4] structure, where L = imidazole, has been previously described (Atria et al., 1999 ▸), a counterpart containing L = MET has not been reported. Herein, we describe the structure of a tetra­nuclear Cu–MET complex [Cu4Cl6O(MET)4] that is obtained by the reaction of anhydrous copper(I) chloride with MET in MeOH under aerobic conditions.

Structural commentary

The structure of the [Cu4Cl6O(MET)4] complex is shown in Fig. 1 ▸. Four copper atoms are arranged around an oxygen atom in a tetra­hedral fashion, with Cu—O distances ranging from 1.8960 (18) to 1.913 (2) Å. The Cu—O—Cu angles range from 108.36 (10) to 110.80 (9)°, indicating a fairly uniform tetra­hedron with little distortion. In fact, the degree of distortion from a tetra­hedral arrangement can be readily quan­ti­fied by the τ4 four-coordinate geometry index that is reported and discussed elsewhere (Yang et al., 2007 ▸; Palmer et al., 2015 ▸, Brescia et al., 2018 ▸). Briefly, τ4 is obtained from the expression, τ4 = [360 − (α +  β)]/141, where α and β represent the two largest angles; a τ4 value of 1.00 indicates an idealized tetra­hedral geometry, whereas a value of 0.00 indicates an idealized square-planar geometry. In the title complex, α = 110.80 (9)° and β = 109.55 (9)°, such that τ4 is 0.990, which indicates negligible deviation from a tetra­hedral geometry for oxygen (Yang et al., 2007 ▸).
Figure 1

The mol­ecular structure of [Cu4Cl6O(MET)4]. For clarity, hydrogen atoms have been omitted. The eth­oxy group of the MET ligand attached to Cu3 (comprising C34, C35 and O31) is disordered over two sets of sites in a 0.515 (19):0.485 (19) ratio.

Each of the four copper atoms is linked to the other three copper atoms via three chloride bridges, with the Cu—Cl bridging distances varying from 2.3579 (10) to 2.4435 (9) Å (for Cu2Cl6 and Cu1Cl2, respectively). Each copper atom is also bound to a nitro­gen atom of a MET ligand. The Cu—N lengths range from 1.949 (2) to 1.972 (3) Å (for Cu1—N11 and Cu4—N41, respectively). Thus, each copper atom sits within a trigonal–bipyramidal arrangement, with the oxygen and nitro­gen atoms forming the axial coordination points, and the bridging chloride ligands occupying the equatorial plane. The trigonal–bipyramidal structure is somewhat distorted, as indicated by the fact that the O—Cu—N angles are less than 180°, ranging from 173.12 (10) to 176.91 (10)° (for O1—Cu1—N11 and O1—Cu2—N21, respectively), and the Cl—Cu—Cl angles differ significantly from 120°, ranging from 109.97 (3) to 134.02 (3)° (for Cl2Cu2—Cl4 and Cl3—Cu1Cl2, respectively). Furthermore, the O—Cu—Cl angles are all less than 90°, ranging from 83.33 (6) to 86.13 (6)° (for O1—Cu1Cl2 and O1—CuCl1, respectively), indicating that the equatorial chloride ligands are displaced slightly more towards the axial oxygen atom in the center of the mol­ecule, than towards the nitro­gen-containing ligand in the opposite axial position. The τ5 geometry index is a general descriptor of five-coordinate mol­ecules and provides a way to determine the extent of distortion of a mol­ecule from trigonal bipyramidal to square pyramidal (Addison et al., 1984 ▸). The τ5 geometry index is calculated by using the equation: τ5 = (β − α)/60, where β − α is the difference between the two largest angles (Addison et al., 1984 ▸; Palmer & Parkin, 2014 ▸). The values for τ5 are calculated to be 0.65 (Cu1), 0.74 (Cu2), 0.84 (Cu3) and 0.73 (Cu4) for the five-coordinate copper centers, giving an average τ5 value of 0.74. The τ5 values obtained indicate that the copper-centered structures are closer to an idealized trigonal–bipyramidal (1.00) than a square-pyramidal geometry (0.00).

Supra­molecular features

Fig. 2 ▸ shows the packing in the unit cell. As well as the O—H⋯O hydrogen bonds shown in Table 1 ▸, O11—H11A and O21—H21A probably form links to the disordered solvent mol­ecules removed with SQUEEZE (see Experimental). The most inter­esting observation is the existence of short O⋯N inter­actions between the N13/O12/O13 and N33/O32/O33 nitro groups of adjacent clusters that are oriented perpendicular to each other, as illustrated in Fig. 3 ▸ with O12⋯N33 = 2.775 (4) Å. This type of contact has previously been described as an ONO2⋯π(N)NO2 inter­action (Daszkiewicz, 2013 ▸); such contacts are typically shorter than 3 Å.
Figure 2

Unit-cell packing of [Cu4Cl6O(MET)4] viewed down [100].

Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O41—H41A⋯O31i 0.89 (2)2.13 (3)2.738 (8)125 (2)

Symmetry code: (i) .

Figure 3

Detail of the O⋯N inter­action between the nitro groups of adjacent clusters.

Database survey

The tetra­nuclear copper motif, L 4Cu4Cl6O, where L is a nitro­gen-containing Lewis base ligand, is common. For instance, several structures have been reported in which L contains either an imidazole or substituted imidazole moiety (Clegg et al., 1988 ▸; Norman et al., 1989 ▸ Erdonmez et al., 1990 ▸; Atria et al., 1999 ▸; Cortés et al., 2006 ▸; Chiarella et al., 2009 ▸, 2010 ▸; She et al., 2010 ▸) or a benzimidazole moiety (Tosik et al., 1991 ▸ Zhang et al., 2003 ▸; Jian et al., 2004 ▸; Li et al., 2011 ▸). The title compound [Cu4Cl6O(MET)4] contains Cu—X distances that are similar to those in [Cu4Cl6O(imidazole)4] (Atria et al., 1999 ▸). For example, the Cu—O distances in [Cu4Cl6O(MET)4] are 1.8960 (18)–1.913 (2) Å, compared to 1.903 (4)–1.924 (4) Å for [Cu4Cl6O(imidazole)4]. Likewise, the Cu—Cl distances in [Cu4Cl6O(MET)4] are 2.3579 (10)–2.4435 (9) Å, compared to 2.374 (2)–2.564 (2) Å for [Cu4Cl6O(imidazole)4]. Moreover, the Cu—N distances in [Cu4Cl6O(MET)4] are 1.949 (2)–1.972 (3) Å, compared to 1.934 (6)–1.961 (6) Å.

Synthesis and crystallization

Anhydrous copper(I) chloride (0.015 g, 0.00015 mol) was mixed with MET (0.05075 g, 0.00030 mol) in methanol (2 ml) in a glass vial, forming a dark olive-colored solution. After allowing the solution to evaporate for eight days, gold-colored plates, suitable for X-ray diffraction, were obtained.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. Hydrogen atoms on carbon were placed in calculated positions (C—H = 0.95–1.00 Å) and included as riding contributions with isotropic displacement parameters U iso(H) = 1.2U eq(Csp 2) or 1.5U eq(Csp 3). Atoms C34, C35 and O31 and their attached H atoms were modeled as disordered over two sets of sites in a 0.515 (19):0.485 (19) ratio. The structure contains two methanol mol­ecules and one water mol­ecule, but they are disordered and were removed by the SQUEEZE procedure in PLATON (Spek, 2015 ▸); the stated crystal data (M r, μ, etc.) only refer to the main mol­ecule.
Table 2

Experimental details

Crystal data
Chemical formula[Cu4Cl6O(C6H9N3O3)4]
M r 1167.51
Crystal system, space groupMonoclinic, C2/c
Temperature (K)130
a, b, c (Å)22.125 (3), 13.361 (2), 32.633 (5)
β (°)94.752 (2)
V3)9613 (3)
Z 8
Radiation typeMo Kα
μ (mm−1)2.14
Crystal size (mm)0.36 × 0.20 × 0.10
 
Data collection
DiffractometerBruker APEXII CCD
Absorption correctionMulti-scan (SADABS; Bruker, 2008)
T min, T max 0.586, 0.746
No. of measured, independent and observed [I > 2σ(I)] reflections78050, 15003, 11100
R int 0.048
(sin θ/λ)max−1)0.720
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.045, 0.118, 1.03
No. of reflections15003
No. of parameters579
No. of restraints120
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)1.55, −1.09

Computer programs: APEX2 and), SAINT (Bruker, 2008 ▸), SHELXS97 (Sheldrick 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and SHELXTL (Sheldrick, 2008 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989019008570/hb7801sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989019008570/hb7801Isup2.hkl CCDC reference: 1923275 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Cu4Cl6O(C6H9N3O3)4]F(000) = 4688
Mr = 1167.51Dx = 1.613 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 22.125 (3) ÅCell parameters from 9836 reflections
b = 13.361 (2) Åθ = 2.2–29.8°
c = 32.633 (5) ŵ = 2.14 mm1
β = 94.752 (2)°T = 130 K
V = 9613 (3) Å3Plate, gold
Z = 80.36 × 0.20 × 0.10 mm
Bruker APEXII CCD diffractometer11100 reflections with I > 2σ(I)
φ and ω scansRint = 0.048
Absorption correction: multi-scan (SADABS; Bruker, 2008)θmax = 30.8°, θmin = 1.3°
Tmin = 0.586, Tmax = 0.746h = −31→31
78050 measured reflectionsk = −19→19
15003 independent reflectionsl = −46→46
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.045H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.118w = 1/[σ2(Fo2) + (0.0497P)2 + 31.4385P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.002
15003 reflectionsΔρmax = 1.55 e Å3
579 parametersΔρmin = −1.09 e Å3
120 restraints
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
Cu10.80290 (2)−0.01300 (3)0.39169 (2)0.02214 (8)
Cu20.70660 (2)−0.01915 (3)0.31768 (2)0.02614 (8)
Cu30.66594 (2)0.02107 (3)0.40449 (2)0.03036 (9)
Cu40.71326 (2)−0.19124 (3)0.38380 (2)0.02342 (8)
Cl10.81567 (3)−0.18214 (5)0.41707 (2)0.02840 (14)
Cl20.81362 (3)−0.00755 (7)0.31780 (2)0.03451 (17)
Cl30.75591 (3)0.09683 (6)0.43943 (2)0.03046 (16)
Cl40.67511 (3)−0.19355 (6)0.31175 (2)0.03082 (15)
Cl50.63812 (3)−0.13927 (7)0.42920 (2)0.03596 (17)
Cl60.63258 (5)0.09252 (9)0.33861 (3)0.0547 (3)
N110.88549 (10)0.03600 (18)0.40341 (7)0.0233 (5)
N120.96498 (10)0.13435 (19)0.39975 (9)0.0302 (5)
N131.04472 (14)0.0232 (3)0.43287 (15)0.0646 (12)
N210.68926 (12)0.0204 (2)0.26024 (8)0.0307 (5)
N220.67466 (12)0.1147 (2)0.20463 (8)0.0312 (6)
N230.62700 (16)−0.0128 (3)0.15652 (10)0.0497 (9)
N310.60566 (11)0.0980 (2)0.43173 (8)0.0316 (6)
N320.51725 (10)0.15805 (18)0.44639 (7)0.0243 (5)
N330.55277 (14)0.2806 (3)0.50054 (11)0.0513 (9)
N410.70835 (10)−0.33784 (19)0.38980 (7)0.0254 (5)
N420.71449 (13)−0.4914 (2)0.41434 (9)0.0355 (6)
N430.71274 (19)−0.5839 (3)0.34682 (11)0.0591 (10)
O10.72212 (8)−0.05076 (15)0.37460 (6)0.0222 (4)
O110.9926 (2)0.1888 (4)0.31860 (12)0.0965 (15)
H11A0.991 (3)0.228 (4)0.2983 (14)0.145*
O121.05456 (14)−0.0584 (3)0.44694 (19)0.125 (2)
O131.08424 (12)0.0857 (3)0.43043 (14)0.0822 (12)
O210.55815 (16)0.1846 (3)0.17440 (17)0.0943 (14)
H21A0.5252 (8)0.206 (4)0.1839 (17)0.141*
O220.59231 (17)−0.0862 (2)0.15657 (10)0.0714 (11)
O230.64160 (13)0.0312 (3)0.12553 (8)0.0606 (9)
O320.59897 (13)0.3128 (3)0.52030 (10)0.0717 (11)
O330.50093 (13)0.3067 (3)0.50600 (10)0.0683 (10)
O410.81469 (16)−0.5364 (3)0.47601 (15)0.0891 (14)
H41A0.8525 (9)−0.5590 (19)0.479 (2)0.134*
O420.70514 (17)−0.5744 (2)0.30998 (9)0.0643 (9)
O430.7238 (3)−0.6628 (3)0.36399 (13)0.139 (2)
C110.90440 (12)0.1254 (2)0.39148 (9)0.0261 (6)
C120.93477 (13)−0.0145 (2)0.42001 (11)0.0333 (7)
H12A0.9349−0.08010.43120.040*
C130.98391 (13)0.0457 (3)0.41783 (12)0.0380 (8)
C141.00057 (14)0.2241 (3)0.39029 (12)0.0403 (8)
H14A1.03020.23880.41390.048*
H14B0.97290.28220.38640.048*
C151.03387 (19)0.2108 (4)0.35240 (16)0.0627 (13)
H15A1.05630.27290.34690.075*
H15B1.06360.15570.35670.075*
C160.86509 (14)0.2053 (3)0.37248 (12)0.0369 (7)
H16A0.82290.18220.36980.055*
H16B0.87800.22130.34520.055*
H16C0.86840.26520.38990.055*
C210.69669 (14)0.1114 (3)0.24465 (9)0.0311 (6)
C220.66075 (16)−0.0364 (3)0.22997 (11)0.0382 (8)
H22A0.6493−0.10460.23230.046*
C230.65153 (15)0.0209 (3)0.19587 (10)0.0355 (7)
C240.66535 (15)0.2064 (3)0.18002 (11)0.0398 (8)
H24A0.66920.19050.15070.048*
H24B0.69720.25570.18890.048*
C250.60375 (18)0.2517 (3)0.18455 (15)0.0514 (10)
H25A0.60140.27390.21330.062*
H25B0.59830.31130.16660.062*
C260.7245 (2)0.1984 (3)0.26728 (12)0.0515 (10)
H26A0.75100.17460.29080.077*
H26B0.69250.24070.27710.077*
H26C0.74830.23730.24890.077*
C310.54558 (12)0.0912 (2)0.42365 (9)0.0247 (5)
C320.61649 (13)0.1716 (2)0.46056 (9)0.0299 (6)
H32A0.65520.19340.47190.036*
C330.56247 (14)0.2077 (2)0.47002 (10)0.0308 (6)
C340.4518 (4)0.1791 (10)0.4409 (4)0.027 (2)0.515 (19)
H34A0.43460.15030.41450.033*0.515 (19)
H34B0.44510.25230.43990.033*0.515 (19)
C350.4205 (4)0.1352 (8)0.4754 (3)0.034 (2)0.515 (19)
H35A0.43510.16860.50140.041*0.515 (19)
H35B0.37630.14690.47060.041*0.515 (19)
O310.4317 (4)0.0314 (7)0.4788 (3)0.040 (2)0.515 (19)
H31A0.4316 (19)0.012 (3)0.5031 (8)0.060*0.515 (19)
C34A0.4496 (4)0.1552 (12)0.4507 (5)0.036 (3)0.485 (19)
H34D0.43530.22340.45680.044*0.485 (19)
H34E0.42830.13350.42430.044*0.485 (19)
C35A0.4336 (5)0.0858 (14)0.4841 (4)0.053 (4)0.485 (19)
H35D0.45230.11030.51080.063*0.485 (19)
H35E0.38900.08570.48540.063*0.485 (19)
O31A0.4535 (6)−0.0129 (10)0.4775 (2)0.054 (3)0.485 (19)
H31D0.483 (6)−0.012 (11)0.489 (4)0.081*0.485 (19)
C360.51388 (13)0.0216 (3)0.39382 (11)0.0357 (7)
H36A0.5428−0.02790.38500.053*
H36B0.49660.05940.36990.053*
H36C0.4813−0.01260.40680.053*
C410.71482 (13)−0.3938 (2)0.42409 (9)0.0287 (6)
C420.70446 (13)−0.4025 (2)0.35718 (9)0.0281 (6)
H42A0.6992−0.38400.32900.034*
C430.70926 (16)−0.4966 (2)0.37164 (10)0.0352 (7)
C440.71595 (19)−0.5751 (3)0.44430 (12)0.0480 (9)
H44A0.7000−0.55190.47010.058*
H44B0.6897−0.63020.43300.058*
C450.7785 (2)−0.6121 (4)0.45304 (15)0.0602 (11)
H45A0.7781−0.67460.46930.072*
H45B0.7964−0.62690.42690.072*
C460.71969 (17)−0.3551 (3)0.46674 (10)0.0393 (8)
H46A0.7583−0.37650.48090.059*
H46B0.6861−0.38130.48130.059*
H46C0.7179−0.28180.46620.059*
U11U22U33U12U13U23
Cu10.01369 (14)0.02604 (17)0.02712 (17)−0.00543 (12)0.00426 (12)−0.00550 (13)
Cu20.02511 (17)0.03088 (19)0.02237 (16)−0.00373 (14)0.00162 (13)−0.00551 (14)
Cu30.01595 (15)0.0409 (2)0.0351 (2)−0.00491 (14)0.00700 (13)−0.01941 (16)
Cu40.01913 (15)0.02818 (18)0.02352 (16)−0.00774 (13)0.00518 (12)−0.00593 (13)
Cl10.0216 (3)0.0303 (4)0.0323 (3)−0.0077 (3)−0.0032 (3)0.0011 (3)
Cl20.0254 (3)0.0527 (5)0.0265 (3)−0.0088 (3)0.0084 (3)−0.0048 (3)
Cl30.0178 (3)0.0377 (4)0.0364 (4)−0.0069 (3)0.0055 (3)−0.0146 (3)
Cl40.0320 (3)0.0325 (4)0.0270 (3)−0.0100 (3)−0.0035 (3)−0.0038 (3)
Cl50.0238 (3)0.0510 (5)0.0351 (4)−0.0049 (3)0.0145 (3)−0.0015 (3)
Cl60.0554 (6)0.0713 (7)0.0395 (5)0.0348 (5)0.0163 (4)0.0098 (4)
N110.0136 (9)0.0250 (12)0.0317 (12)−0.0037 (8)0.0049 (9)−0.0061 (9)
N120.0161 (10)0.0266 (13)0.0485 (16)−0.0053 (9)0.0071 (10)−0.0078 (11)
N130.0175 (13)0.049 (2)0.127 (4)0.0027 (13)−0.0002 (17)0.006 (2)
N210.0349 (13)0.0325 (14)0.0240 (12)−0.0034 (11)−0.0015 (10)−0.0082 (10)
N220.0273 (12)0.0421 (15)0.0240 (12)−0.0001 (11)0.0020 (10)−0.0039 (11)
N230.0530 (19)0.051 (2)0.0406 (17)0.0300 (16)−0.0228 (15)−0.0193 (15)
N310.0183 (11)0.0410 (15)0.0358 (14)−0.0054 (10)0.0040 (10)−0.0198 (12)
N320.0215 (11)0.0276 (12)0.0237 (11)0.0048 (9)0.0007 (9)−0.0023 (9)
N330.0396 (16)0.055 (2)0.057 (2)0.0174 (15)−0.0098 (14)−0.0336 (16)
N410.0189 (10)0.0317 (13)0.0259 (12)−0.0082 (9)0.0033 (9)−0.0044 (10)
N420.0404 (15)0.0300 (14)0.0340 (14)−0.0092 (11)−0.0094 (12)−0.0012 (11)
N430.090 (3)0.0332 (17)0.050 (2)0.0034 (17)−0.0176 (19)−0.0105 (15)
O10.0163 (8)0.0279 (10)0.0227 (9)−0.0040 (7)0.0036 (7)−0.0080 (8)
O110.085 (3)0.148 (4)0.061 (2)−0.048 (3)0.031 (2)−0.016 (2)
O120.0294 (16)0.068 (2)0.273 (7)0.0062 (16)−0.022 (3)0.061 (3)
O130.0176 (12)0.066 (2)0.161 (4)−0.0098 (13)−0.0059 (17)0.005 (2)
O210.0401 (18)0.073 (3)0.168 (4)−0.0018 (17)−0.004 (2)−0.021 (3)
O220.097 (3)0.0370 (16)0.070 (2)0.0127 (16)−0.0530 (19)−0.0170 (14)
O230.0467 (16)0.104 (3)0.0293 (13)0.0229 (16)−0.0096 (11)−0.0139 (15)
O320.0461 (16)0.088 (2)0.077 (2)0.0221 (16)−0.0221 (15)−0.0596 (19)
O330.0407 (15)0.080 (2)0.082 (2)0.0242 (14)−0.0056 (14)−0.0527 (18)
O410.055 (2)0.070 (2)0.134 (4)−0.0152 (17)−0.038 (2)0.037 (2)
O420.108 (3)0.0457 (17)0.0396 (15)−0.0042 (17)0.0097 (16)−0.0170 (13)
O430.290 (7)0.045 (2)0.071 (3)0.046 (3)−0.061 (4)−0.0152 (19)
C110.0193 (12)0.0275 (14)0.0320 (14)−0.0053 (10)0.0064 (10)−0.0070 (11)
C120.0186 (13)0.0289 (15)0.053 (2)0.0019 (11)0.0050 (13)−0.0024 (14)
C130.0141 (12)0.0352 (17)0.065 (2)−0.0015 (11)0.0042 (13)−0.0069 (16)
C140.0221 (14)0.0362 (18)0.063 (2)−0.0153 (13)0.0074 (14)−0.0067 (16)
C150.037 (2)0.071 (3)0.084 (3)−0.022 (2)0.026 (2)−0.004 (2)
C160.0244 (14)0.0344 (17)0.052 (2)−0.0068 (12)0.0012 (13)0.0044 (15)
C210.0313 (15)0.0392 (17)0.0229 (14)−0.0076 (13)0.0035 (11)−0.0058 (12)
C220.0420 (18)0.0303 (16)0.0394 (18)0.0068 (14)−0.0137 (14)−0.0113 (14)
C230.0357 (16)0.0406 (18)0.0284 (15)0.0114 (14)−0.0086 (12)−0.0134 (13)
C240.0319 (16)0.051 (2)0.0359 (17)−0.0074 (15)−0.0003 (13)0.0097 (15)
C250.042 (2)0.043 (2)0.069 (3)0.0006 (17)0.0065 (19)0.0059 (19)
C260.069 (3)0.048 (2)0.0355 (19)−0.025 (2)−0.0065 (18)−0.0030 (16)
C310.0176 (12)0.0325 (15)0.0245 (13)−0.0023 (10)0.0040 (10)−0.0050 (11)
C320.0244 (13)0.0346 (16)0.0305 (15)−0.0031 (12)0.0001 (11)−0.0095 (12)
C330.0273 (14)0.0327 (16)0.0310 (15)0.0078 (12)−0.0053 (11)−0.0106 (12)
C340.017 (3)0.035 (5)0.030 (5)0.010 (3)0.003 (3)0.000 (3)
C350.027 (3)0.043 (5)0.035 (4)0.001 (3)0.013 (3)0.003 (3)
O310.033 (3)0.037 (4)0.052 (4)0.004 (3)0.013 (3)0.011 (3)
C34A0.022 (4)0.045 (7)0.040 (7)0.019 (4)−0.010 (4)−0.005 (5)
C35A0.023 (4)0.091 (11)0.045 (5)−0.001 (7)0.010 (4)0.014 (8)
O31A0.055 (6)0.065 (7)0.041 (4)−0.023 (5)−0.007 (3)0.020 (4)
C360.0197 (13)0.0441 (19)0.0427 (18)−0.0038 (12)−0.0005 (12)−0.0198 (15)
C410.0229 (13)0.0331 (16)0.0294 (14)−0.0129 (11)−0.0008 (11)−0.0043 (12)
C420.0250 (13)0.0332 (16)0.0265 (14)−0.0074 (11)0.0038 (11)−0.0078 (12)
C430.0394 (17)0.0300 (16)0.0348 (16)−0.0058 (13)−0.0052 (13)−0.0074 (13)
C440.059 (2)0.039 (2)0.044 (2)−0.0141 (17)−0.0106 (18)0.0024 (16)
C450.060 (3)0.058 (3)0.060 (3)−0.004 (2)−0.009 (2)0.011 (2)
C460.049 (2)0.0420 (19)0.0265 (15)−0.0144 (16)0.0005 (14)−0.0057 (14)
Cu1—O11.8960 (18)N31—C311.337 (3)
Cu1—N111.949 (2)N31—C321.368 (4)
Cu1—Cl12.4152 (9)N32—C311.348 (4)
Cu1—Cl32.4351 (8)N32—C331.381 (4)
Cu1—Cl22.4435 (9)N32—C341.472 (9)
Cu2—O11.908 (2)N32—C34A1.516 (10)
Cu2—N211.955 (3)N33—O331.226 (4)
Cu2—Cl62.3579 (10)N33—O321.240 (4)
Cu2—Cl22.3726 (9)N33—C331.423 (4)
Cu2—Cl42.4351 (9)N41—C411.343 (4)
Cu3—O11.9022 (19)N41—C421.368 (4)
Cu3—N311.955 (2)N42—C411.342 (4)
Cu3—Cl52.3877 (10)N42—C431.390 (4)
Cu3—Cl62.4113 (11)N42—C441.484 (5)
Cu3—Cl32.4312 (8)N43—O421.207 (4)
Cu4—O11.913 (2)N43—O431.209 (5)
Cu4—N411.972 (3)N43—C431.426 (5)
Cu4—Cl52.4186 (8)O11—C151.404 (6)
Cu4—Cl42.4314 (9)O21—C251.370 (5)
Cu4—Cl12.4332 (8)O41—C451.458 (6)
N11—C111.335 (4)C11—C161.480 (4)
N11—C121.356 (4)C12—C131.359 (4)
N12—C111.350 (4)C14—C151.501 (6)
N12—C131.373 (4)C21—C261.482 (5)
N12—C141.481 (4)C22—C231.352 (5)
N13—O121.195 (5)C24—C251.510 (5)
N13—O131.217 (4)C31—C361.480 (4)
N13—C131.426 (4)C32—C331.348 (4)
N21—C211.334 (4)C34—C351.490 (10)
N21—C221.359 (4)C35—O311.411 (9)
N22—C211.356 (4)C34A—C35A1.495 (13)
N22—C231.376 (4)C35A—O31A1.413 (13)
N22—C241.469 (4)C41—C461.480 (4)
N23—O231.236 (5)C42—C431.343 (5)
N23—O221.246 (5)C44—C451.474 (6)
N23—C231.425 (4)
O1—Cu1—N11173.12 (10)C31—N31—C32107.4 (2)
O1—Cu1—Cl186.13 (6)C31—N31—Cu3125.4 (2)
N11—Cu1—Cl199.55 (7)C32—N31—Cu3127.1 (2)
O1—Cu1—Cl384.63 (6)C31—N32—C33106.1 (2)
N11—Cu1—Cl396.61 (7)C31—N32—C34123.8 (6)
Cl1—Cu1—Cl3112.86 (3)C33—N32—C34129.5 (6)
O1—Cu1—Cl283.33 (6)C31—N32—C34A122.8 (7)
N11—Cu1—Cl291.01 (7)C33—N32—C34A129.4 (7)
Cl1—Cu1—Cl2110.37 (3)O33—N33—O32124.6 (3)
Cl3—Cu1—Cl2134.02 (3)O33—N33—C33119.6 (3)
O1—Cu2—N21176.91 (10)O32—N33—C33115.9 (3)
O1—Cu2—Cl686.06 (6)C41—N41—C42107.0 (3)
N21—Cu2—Cl691.20 (8)C41—N41—Cu4129.2 (2)
O1—Cu2—Cl285.06 (6)C42—N41—Cu4123.4 (2)
N21—Cu2—Cl295.77 (8)C41—N42—C43106.5 (3)
Cl6—Cu2—Cl2132.47 (4)C41—N42—C44125.2 (3)
O1—Cu2—Cl483.85 (6)C43—N42—C44128.2 (3)
N21—Cu2—Cl498.64 (8)O42—N43—O43124.0 (4)
Cl6—Cu2—Cl4115.31 (4)O42—N43—C43118.0 (3)
Cl2—Cu2—Cl4109.97 (3)O43—N43—C43117.9 (4)
O1—Cu3—N31176.21 (10)Cu1—O1—Cu3110.80 (9)
O1—Cu3—Cl585.31 (6)Cu1—O1—Cu2108.46 (9)
N31—Cu3—Cl596.51 (9)Cu3—O1—Cu2108.36 (10)
O1—Cu3—Cl684.68 (6)Cu1—O1—Cu4108.74 (10)
N31—Cu3—Cl691.57 (9)Cu3—O1—Cu4109.55 (9)
Cl5—Cu3—Cl6126.01 (4)Cu2—O1—Cu4110.93 (9)
O1—Cu3—Cl384.61 (6)N11—C11—N12110.5 (3)
N31—Cu3—Cl397.52 (7)N11—C11—C16125.5 (3)
Cl5—Cu3—Cl3116.05 (3)N12—C11—C16124.0 (3)
Cl6—Cu3—Cl3115.56 (4)N11—C12—C13107.8 (3)
O1—Cu4—N41175.50 (9)C12—C13—N12108.4 (3)
O1—Cu4—Cl584.21 (6)C12—C13—N13126.4 (3)
N41—Cu4—Cl5100.26 (7)N12—C13—N13125.2 (3)
O1—Cu4—Cl483.84 (6)N12—C14—C15112.4 (3)
N41—Cu4—Cl493.78 (7)O11—C15—C14109.9 (3)
Cl5—Cu4—Cl4113.26 (3)N21—C21—N22110.5 (3)
O1—Cu4—Cl185.25 (6)N21—C21—C26125.7 (3)
N41—Cu4—Cl193.57 (7)N22—C21—C26123.7 (3)
Cl5—Cu4—Cl1111.98 (3)C23—C22—N21108.1 (3)
Cl4—Cu4—Cl1131.90 (3)C22—C23—N22108.5 (3)
Cu1—Cl1—Cu479.38 (2)C22—C23—N23125.7 (3)
Cu2—Cl2—Cu179.70 (2)N22—C23—N23125.6 (3)
Cu3—Cl3—Cu179.95 (3)N22—C24—C25111.6 (3)
Cu4—Cl4—Cu280.61 (2)O21—C25—C24111.5 (4)
Cu3—Cl5—Cu480.86 (3)N31—C31—N32110.3 (2)
Cu2—Cl6—Cu380.74 (3)N31—C31—C36125.6 (3)
C11—N11—C12107.5 (2)N32—C31—C36124.2 (2)
C11—N11—Cu1123.7 (2)C33—C32—N31107.8 (3)
C12—N11—Cu1128.4 (2)C32—C33—N32108.4 (3)
C11—N12—C13105.8 (2)C32—C33—N33126.4 (3)
C11—N12—C14124.5 (3)N32—C33—N33125.1 (3)
C13—N12—C14129.7 (3)N32—C34—C35110.2 (7)
O12—N13—O13122.9 (3)O31—C35—C34110.9 (8)
O12—N13—C13117.5 (3)C35A—C34A—N32112.3 (8)
O13—N13—C13119.7 (4)O31A—C35A—C34A111.8 (9)
C21—N21—C22107.3 (3)N42—C41—N41110.2 (3)
C21—N21—Cu2126.3 (2)N42—C41—C46124.1 (3)
C22—N21—Cu2126.1 (2)N41—C41—C46125.7 (3)
C21—N22—C23105.6 (3)C43—C42—N41108.6 (3)
C21—N22—C24125.2 (3)C42—C43—N42107.6 (3)
C23—N22—C24127.8 (3)C42—C43—N43124.9 (3)
O23—N23—O22125.4 (3)N42—C43—N43127.3 (3)
O23—N23—C23118.8 (4)C45—C44—N42110.4 (3)
O22—N23—C23115.9 (4)O41—C45—C44109.5 (4)
D—H···AD—HH···AD···AD—H···A
O41—H41A···O31i0.89 (2)2.13 (3)2.738 (8)125 (2)
  12 in total

Review 1.  Why metronidazole is active against both bacteria and parasites.

Authors:  J Samuelson
Journal:  Antimicrob Agents Chemother       Date:  1999-07       Impact factor: 5.191

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and anti-amoebic activity of gold(I), ruthenium(II), and copper(II) complexes of metronidazole.

Authors:  Fareeda Athar; Kakul Husain; Mohammad Abid; Subhash M Agarwal; Simon J Coles; Micheal B Hursthouse; Mannar R Maurya; Amir Azam
Journal:  Chem Biodivers       Date:  2005-10       Impact factor: 2.408

4.  Three oxo complexes with a tetranuclear [Cu(4)(mu(2)-Cl)(6)(mu(4)-O)] unit.

Authors:  Piedad Cortés; Ana María Atria; María Teresa Garland; Ricardo Baggio
Journal:  Acta Crystallogr C       Date:  2006-06-30       Impact factor: 1.172

5.  Structural variation in copper(I) complexes with pyridylmethylamide ligands: structural analysis with a new four-coordinate geometry index, tau4.

Authors:  Lei Yang; Douglas R Powell; Robert P Houser
Journal:  Dalton Trans       Date:  2007-01-29       Impact factor: 4.390

6.  The neutral cluster amminehexa-mu(2)-chlorido-mu(4)-oxido-tris(1,4,6-triazabicyclo[3.3.0]oct-4-ene)tetracopper(II).

Authors:  Gina M Chiarella; Doris Y Melgarejo; John P Fackler
Journal:  Acta Crystallogr C       Date:  2009-05-02       Impact factor: 1.172

7.  Synthesis and structural characterization of tris(2-mercapto-1-methylbenzimidazolyl)hydroborato cadmium halide complexes, {[Tm(MeBenz)]Cd(μ-Cl)}2 and [Tm(MeBenz)]CdI: a rare example of cadmium in a trigonal bipyramidal sulfur-rich coordination environment.

Authors:  Joshua H Palmer; Gerard Parkin
Journal:  Dalton Trans       Date:  2014-08-08       Impact factor: 4.390

8.  Hexa-μ-chlorido-μ(4)-oxido-tetra-kis-({1-[(pyridin-2-yl)meth-yl]-1H-benzimidazole-κN}copper(II)).

Authors:  Hui Li; Hongshi Jiang; Hong Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-14

9.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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