Literature DB >> 31391991

Bis(4-acet-oxy-N,N-di-methyl-tryptammonium) fumarate: a new crystalline form of psilacetin, an alternative to psilocybin as a psilocin prodrug.

Andrew R Chadeayne1, James A Golen2, David R Manke2.   

Abstract

The title compound (systematic name: bis-{2-[4-(acet-yloxy)-1H-indol-3-yl]ethan-1-aminium} but-2-enedioate), 2C14H19N2O2 +·C4H2O4 2-, has a single protonated psilacetin cation and one half of a fumarate dianion in the asymmetric unit. There are N-H⋯O hydrogen bonds between the ammonium H atoms and the fumarate O atoms, as well as N-H⋯O hydrogen bonds between the indole H atoms and the fumarate O atoms. The hydrogen bonds hold the ions together in infinite one-dimensional chains along [111].

Entities:  

Keywords:  crystal structure; hydrogen bonding; tryptamines

Year:  2019        PMID: 31391991      PMCID: PMC6658936          DOI: 10.1107/S2056989019007370

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Psychedelic agents have received a great deal of inter­est lately as potential pharmaceuticals to treat mood disorders, including depression and post traumatic stress disorder (PTSD) (Carhart-Harris & Goodwin, 2017 ▸). Psilocybin, a naturally occurring tryptamine derivative found in ‘magic’ mushrooms, is a prodrug of psilocin. When consumed orally, psilocybin hydrolyzes to generate psilocin, a serotonin-2a agonist, producing mood-altering or ‘psychedelic’ effects (Dinis-Oliveira, 2017 ▸). Like psilocybin, psilacetin serves as a prodrug of psilocin. Compared to psilocybin, psilacetin is easier and less expensive to synthesize. This suggests that administering psilacetin (instead of psilocybin) represents a better means of delivery for the active psilocin. Psilacetin was first reported in 1999 by Nichols and co-workers (Nichols & Frescas, 1999 ▸), generally producing the mol­ecule as its crystalline fumarate salt. Psilacetin was structurally characterized earlier this year (Chadeayne et al., 2019 ▸). Herein we report the structure of a new crystalline form of psilacetin, in which two psilacetin mol­ecules are protonated, and charge-balanced by one fumarate dianion.

Structural commentary

The mol­ecular structure of bis­(4-acet­oxy-N,N-di­methyl­tryptammonium) fumarate is shown in Fig. 1 ▸. The cation possesses a near-planar indole, with a mean deviation from planarity of 0.04 Å. The acetate on the 4-position of the indole is approximately perpendicular, with the angles between the indole and acetate planes being 100.85 (1)°. Half of a fumarate ion is present in the asymmetric unit, with the full dianion produced through inversion. The fumarate shows a near planar trans configuration with a deviation from planarity of 0.019 Å. A series of N—H⋯O hydrogen bonds hold the ions together in the solid state.
Figure 1

The mol­ecular structure of bis­(4-acet­oxy-N,N-di­methyl­tryptammonium) fumarate, showing the atomic labeling. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bonds are shown as dashed lines. Symmetry code: (i) 2 − x, 1 − y, 2 − z.

Supra­molecular features

The 4-acet­oxy-N,N-di­methyl­tryptammonium cations and fumarate dianions are held together in an infinite one-dimensional chain through N—H⋯O hydrogen bonds (Table 1 ▸) along the [111] direction. The anionic oxygen of the carb­oxy­lic acid possesses a hydrogen bond with the ammonium proton of the psilacetin mol­ecule. Each of these oxygens also forms a hydrogen bond with the hydrogen of an indole nitro­gen of a different psilacetin cation. Both anionic oxygens of the fumarate dianions form the same hydrogen-bonding inter­actions, generated through symmetry. The hydrogen-bonding inter­actions of a single fumarate dianion are shown in Fig. 2 ▸. The packing of the compound is shown in Fig. 3 ▸.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O4ii 0.90 (2)1.91 (2)2.786 (2)165 (2)
N2—H2⋯O40.99 (2)1.61 (2)2.607 (2)179 (2)

Symmetry code: (ii) .

Figure 2

The hydrogen bonding of the fumarate ion in the structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms not involved in hydrogen bonds are omitted for clarity. Symmetry codes: (i) 2 − x, 1 − y, 2 − z, (iii) 1 − x, 1 + y, 1 + z, (iv) 1 − x, −y, 1 − z.

Figure 3

The crystal packing of the title compound, viewed along the b axis. The N—H⋯O bonds (Table 1 ▸) are shown as dashed lines. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms not involved in hydrogen bonding are omitted for clarity

Database survey

We recently reported a closely related structure in which one 4-acet­oxy-N,N-di­methyl­tryptammonium cation is charge balanced by one 3-carb­oxy­acrylate anion (Chadeayne et al., 2019 ▸). The structure reported here has the same 4-acet­oxy-N,N-di­methyl­tryptammonium cation, two of which are charge-balanced by a single fumarate dianion. The bond distances and angles observed in the compound reported here are consistent with our prior report. The two other reported 4-substituted tryptamine structures are those of the naturally occurring products of ‘magic’ mushrooms – psilocybin, C12H16N2PO4 (Weber & Petcher, 1974 ▸) and psilocin, C12H16N2O (Petcher & Weber, 1974 ▸). Psilocybin is the 4-phosphate-substituted variation of N,N-di­methyl­tryptamine, and exists as an ammonium/phosphate zwitterion in the solid state. Psilocin, 4-hy­droxy-N,N-di­methyl­tryptamine, is believed to be a statistical mixture of a neutral mol­ecule and an ammonium/phenoxide zwitterion. In both cases, the tryptamine components are structurally very similar to the title compound, but their arrangements in the solid state are substanti­ally different as there are no counter-ions present.

Synthesis and crystallization

A commercial sample (The Indole Shop) of 4-acet­oxy-N,N-di­methyl­tryptamine fumarate (100 mg, 0.16 mmol) was dissolved in 10 mL of water and treated with one equivalent of lead(II) acetate­(53 mg, 0.16 mmol). Lead(II) fumarate precipitated and was filtered [the presence of lead(II) fumarate was confirmed by the unit cell of the precipitate]. Water was removed in vacuo and the resulting residue was picked up in acetone and filtered. The filtrate was allowed to evaporate slowly, resulting in single crystals suitable for X-ray analysis.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. The methyl hydrogens on C2 were disordered over two positions and were refined at 50% occupancy with the C–C–H planes set at 60o to each other. The H atoms on N1 and N2 were found in the difference-Fourier map and refined freely. H atoms were placed in calculated positions (C—H = 0.95–0.99 Å) and refined as riding with U iso(H) = 1.5U eq(C-meth­yl) and 1.2U eq(C) for all other H atoms.
Table 2

Experimental details

Crystal data
Chemical formula2C14H19N2O2 +·C4H2O4 2−
M r 608.68
Crystal system, space groupTriclinic, P
Temperature (K)200
a, b, c (Å)8.3965 (13), 8.9879 (14), 12.0126 (16)
α, β, γ (°)101.730 (5), 100.818 (5), 112.463 (5)
V3)784.2 (2)
Z 1
Radiation typeMo Kα
μ (mm−1)0.09
Crystal size (mm)0.19 × 0.16 × 0.13
 
Data collection
DiffractometerBruker D8 Venture CMOS
Absorption correctionMulti-scan (SADABS; Bruker, 2016)
T min, T max 0.714, 0.745
No. of measured, independent and observed [I > 2σ(I)] reflections21581, 2877, 2087
R int 0.056
(sin θ/λ)max−1)0.604
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.045, 0.110, 1.03
No. of reflections2877
No. of parameters210
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.26, −0.20

Computer programs: APEX3 and SAINT (Bruker, 2016 ▸), SHELXT2014 (Sheldrick, 2015 ▸), SHELXL97 (Sheldrick, 2008 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989019007370/ff2159sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989019007370/ff2159Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989019007370/ff2159Isup3.cml CCDC reference: 1917404 Additional supporting information: crystallographic information; 3D view; checkCIF report
2C14H19N2O2+·C4H2O42Z = 1
Mr = 608.68F(000) = 324
Triclinic, P1Dx = 1.289 Mg m3
a = 8.3965 (13) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.9879 (14) ÅCell parameters from 6407 reflections
c = 12.0126 (16) Åθ = 3.3–25.1°
α = 101.730 (5)°µ = 0.09 mm1
β = 100.818 (5)°T = 200 K
γ = 112.463 (5)°BLOCK, colourless
V = 784.2 (2) Å30.19 × 0.16 × 0.13 mm
Bruker D8 Venture CMOS diffractometer2087 reflections with I > 2σ(I)
φ and ω scansRint = 0.056
Absorption correction: multi-scan (SADABS; Bruker, 2016)θmax = 25.4°, θmin = 3.3°
Tmin = 0.714, Tmax = 0.745h = −10→10
21581 measured reflectionsk = −10→10
2877 independent reflectionsl = −14→14
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.045w = 1/[σ2(Fo2) + (0.0387P)2 + 0.3852P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.110(Δ/σ)max < 0.001
S = 1.03Δρmax = 0.26 e Å3
2877 reflectionsΔρmin = −0.20 e Å3
210 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.050 (4)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O10.0322 (2)0.33780 (19)0.50722 (14)0.0539 (4)
O20.30616 (18)0.46535 (16)0.48485 (12)0.0413 (4)
O30.6497 (2)0.3361 (2)1.04226 (12)0.0597 (5)
O40.69101 (17)0.29711 (17)0.86294 (11)0.0386 (4)
N10.2368 (2)−0.0732 (2)0.29315 (15)0.0412 (4)
N20.3416 (2)0.1243 (2)0.79890 (13)0.0375 (4)
C10.2567 (4)0.5920 (3)0.6569 (2)0.0578 (6)
H1A0.38180.66700.66500.087*0.5
H1B0.18470.65580.65610.087*0.5
H1C0.25310.54570.72400.087*0.5
H1D0.16460.57870.69840.087*0.5
H1E0.36170.58990.70730.087*0.5
H1F0.29330.70000.63940.087*0.5
C20.1817 (3)0.4512 (3)0.54365 (18)0.0406 (5)
C30.2616 (3)0.3380 (2)0.37872 (17)0.0367 (5)
C40.2330 (3)0.3748 (3)0.27365 (19)0.0482 (6)
H40.23290.48040.27350.058*
C50.2040 (3)0.2580 (3)0.1667 (2)0.0572 (7)
H50.18390.28520.09450.069*
C60.2041 (3)0.1050 (3)0.16395 (18)0.0491 (6)
H60.18550.02610.09120.059*
C70.2325 (2)0.0689 (3)0.27162 (16)0.0361 (5)
C80.2611 (2)0.1833 (2)0.38128 (15)0.0324 (4)
C90.2860 (3)0.1039 (2)0.47124 (16)0.0378 (5)
C100.2697 (3)−0.0505 (3)0.41319 (17)0.0428 (5)
H100.2796−0.13130.45060.051*
C110.3232 (4)0.1765 (3)0.60302 (17)0.0552 (7)
H11A0.45230.25690.63770.066*
H11B0.25180.24080.61600.066*
C120.2802 (3)0.0483 (3)0.66691 (16)0.0446 (6)
H12A0.3380−0.02640.64530.054*
H12B0.1482−0.02220.64070.054*
C130.3087 (4)−0.0104 (3)0.8580 (2)0.0623 (7)
H13A0.3654−0.08190.82980.094*
H13B0.1786−0.07940.83890.094*
H13C0.36030.04150.94430.094*
C140.2660 (3)0.2400 (4)0.84318 (19)0.0610 (7)
H14A0.30730.27930.93030.092*
H14B0.13410.18040.81590.092*
H14C0.30630.33710.81280.092*
C150.9426 (3)0.4767 (2)1.03029 (16)0.0346 (5)
H150.98730.51931.11460.042*
C160.7463 (3)0.3612 (2)0.97637 (16)0.0340 (5)
H10.240 (3)−0.159 (3)0.242 (2)0.055 (7)*
H20.475 (3)0.191 (3)0.8236 (18)0.048 (6)*
U11U22U33U12U13U23
O10.0506 (10)0.0427 (9)0.0626 (10)0.0148 (8)0.0223 (8)0.0098 (8)
O20.0381 (8)0.0330 (8)0.0418 (8)0.0099 (6)0.0069 (6)0.0048 (6)
O30.0445 (9)0.0788 (12)0.0310 (8)0.0068 (8)0.0124 (7)0.0053 (8)
O40.0332 (8)0.0447 (8)0.0248 (7)0.0120 (6)0.0032 (6)−0.0008 (6)
N10.0449 (11)0.0422 (11)0.0307 (9)0.0198 (9)0.0081 (8)0.0003 (8)
N20.0323 (9)0.0398 (10)0.0267 (8)0.0065 (8)0.0070 (7)0.0022 (7)
C10.0716 (17)0.0518 (14)0.0449 (13)0.0323 (13)0.0071 (12)0.0028 (11)
C20.0472 (13)0.0356 (12)0.0406 (12)0.0208 (11)0.0097 (10)0.0125 (9)
C30.0318 (11)0.0356 (11)0.0347 (11)0.0086 (9)0.0082 (8)0.0083 (9)
C40.0514 (14)0.0464 (13)0.0463 (13)0.0165 (11)0.0143 (10)0.0230 (11)
C50.0671 (16)0.0699 (17)0.0386 (13)0.0257 (13)0.0204 (11)0.0283 (12)
C60.0501 (13)0.0634 (16)0.0291 (11)0.0189 (12)0.0169 (10)0.0114 (10)
C70.0287 (10)0.0423 (12)0.0308 (10)0.0106 (9)0.0097 (8)0.0070 (9)
C80.0254 (10)0.0364 (11)0.0270 (9)0.0082 (8)0.0050 (7)0.0055 (8)
C90.0436 (12)0.0359 (11)0.0269 (10)0.0170 (9)0.0019 (8)0.0036 (8)
C100.0511 (13)0.0416 (12)0.0306 (11)0.0217 (10)0.0034 (9)0.0055 (9)
C110.0909 (19)0.0408 (13)0.0269 (11)0.0334 (13)−0.0004 (11)0.0031 (9)
C120.0386 (12)0.0459 (13)0.0265 (10)0.0036 (10)0.0053 (9)−0.0018 (9)
C130.0717 (17)0.0533 (15)0.0392 (12)0.0026 (13)0.0183 (12)0.0149 (11)
C140.0548 (15)0.091 (2)0.0379 (12)0.0421 (14)0.0129 (11)0.0014 (12)
C150.0373 (11)0.0371 (11)0.0228 (9)0.0151 (9)0.0025 (7)0.0037 (8)
C160.0372 (11)0.0350 (11)0.0267 (10)0.0159 (9)0.0065 (8)0.0056 (8)
O1—C21.200 (2)C5—H50.9500
O2—C21.349 (2)C5—C61.369 (3)
O2—C31.405 (2)C6—H60.9500
O3—C161.228 (2)C6—C71.396 (3)
O4—C161.282 (2)C7—C81.412 (3)
N1—C71.365 (3)C8—C91.437 (3)
N1—C101.373 (3)C9—C101.362 (3)
N1—H10.90 (2)C9—C111.506 (3)
N2—C121.493 (2)C10—H100.9500
N2—C131.488 (3)C11—H11A0.9900
N2—C141.475 (3)C11—H11B0.9900
N2—H20.99 (2)C11—C121.480 (3)
C1—H1A0.9800C12—H12A0.9900
C1—H1B0.9800C12—H12B0.9900
C1—H1C0.9800C13—H13A0.9800
C1—H1D0.9800C13—H13B0.9800
C1—H1E0.9800C13—H13C0.9800
C1—H1F0.9800C14—H14A0.9800
C1—C21.489 (3)C14—H14B0.9800
C3—C41.370 (3)C14—H14C0.9800
C3—C81.396 (3)C15—C15i1.309 (4)
C4—H40.9500C15—H150.9500
C4—C51.397 (3)C15—C161.494 (3)
C2—O2—C3118.62 (15)C5—C6—C7117.8 (2)
C7—N1—C10108.50 (17)C7—C6—H6121.1
C7—N1—H1126.7 (15)N1—C7—C6129.45 (19)
C10—N1—H1123.8 (15)N1—C7—C8107.93 (17)
C12—N2—H2107.7 (12)C6—C7—C8122.6 (2)
C13—N2—C12110.37 (16)C3—C8—C7117.04 (17)
C13—N2—H2105.4 (12)C3—C8—C9136.10 (17)
C14—N2—C12114.55 (17)C7—C8—C9106.85 (17)
C14—N2—C13111.26 (18)C8—C9—C11127.06 (18)
C14—N2—H2107.1 (12)C10—C9—C8106.02 (16)
H1A—C1—H1B109.5C10—C9—C11126.91 (18)
H1A—C1—H1C109.5N1—C10—H10124.7
H1A—C1—H1D141.1C9—C10—N1110.70 (19)
H1A—C1—H1E56.3C9—C10—H10124.7
H1A—C1—H1F56.3C9—C11—H11A108.7
H1B—C1—H1C109.5C9—C11—H11B108.7
H1B—C1—H1D56.3H11A—C11—H11B107.6
H1B—C1—H1E141.1C12—C11—C9114.06 (17)
H1B—C1—H1F56.3C12—C11—H11A108.7
H1C—C1—H1D56.3C12—C11—H11B108.7
H1C—C1—H1E56.3N2—C12—H12A109.0
H1C—C1—H1F141.1N2—C12—H12B109.0
H1D—C1—H1E109.5C11—C12—N2112.99 (16)
H1D—C1—H1F109.5C11—C12—H12A109.0
H1E—C1—H1F109.5C11—C12—H12B109.0
C2—C1—H1A109.5H12A—C12—H12B107.8
C2—C1—H1B109.5N2—C13—H13A109.5
C2—C1—H1C109.5N2—C13—H13B109.5
C2—C1—H1D109.5N2—C13—H13C109.5
C2—C1—H1E109.5H13A—C13—H13B109.5
C2—C1—H1F109.5H13A—C13—H13C109.5
O1—C2—O2122.94 (19)H13B—C13—H13C109.5
O1—C2—C1126.3 (2)N2—C14—H14A109.5
O2—C2—C1110.81 (19)N2—C14—H14B109.5
C4—C3—O2118.17 (19)N2—C14—H14C109.5
C4—C3—C8120.95 (19)H14A—C14—H14B109.5
C8—C3—O2120.68 (17)H14A—C14—H14C109.5
C3—C4—H4119.8H14B—C14—H14C109.5
C3—C4—C5120.4 (2)C15i—C15—H15117.7
C5—C4—H4119.8C15i—C15—C16124.7 (2)
C4—C5—H5119.4C16—C15—H15117.7
C6—C5—C4121.2 (2)O3—C16—O4124.80 (18)
C6—C5—H5119.4O3—C16—C15118.60 (16)
C5—C6—H6121.1O4—C16—C15116.59 (16)
O2—C3—C4—C5174.36 (19)C6—C7—C8—C3−0.6 (3)
O2—C3—C8—C7−173.84 (16)C6—C7—C8—C9−179.64 (19)
O2—C3—C8—C94.9 (3)C7—N1—C10—C90.4 (2)
N1—C7—C8—C3−179.97 (16)C7—C8—C9—C10−0.7 (2)
N1—C7—C8—C91.0 (2)C7—C8—C9—C11179.2 (2)
C2—O2—C3—C4107.9 (2)C8—C3—C4—C5−0.5 (3)
C2—O2—C3—C8−77.2 (2)C8—C9—C10—N10.2 (2)
C3—O2—C2—O1−2.8 (3)C8—C9—C11—C12159.8 (2)
C3—O2—C2—C1176.73 (17)C9—C11—C12—N2172.04 (19)
C3—C4—C5—C6−0.3 (4)C10—N1—C7—C6179.8 (2)
C3—C8—C9—C10−179.5 (2)C10—N1—C7—C8−0.8 (2)
C3—C8—C9—C110.3 (4)C10—C9—C11—C12−20.4 (4)
C4—C3—C8—C70.9 (3)C11—C9—C10—N1−179.7 (2)
C4—C3—C8—C9179.6 (2)C13—N2—C12—C11−175.2 (2)
C4—C5—C6—C70.6 (3)C14—N2—C12—C1158.3 (3)
C5—C6—C7—N1179.1 (2)C15i—C15—C16—O3−174.9 (3)
C5—C6—C7—C8−0.2 (3)C15i—C15—C16—O44.1 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O4ii0.90 (2)1.91 (2)2.786 (2)165 (2)
N2—H2···O40.99 (2)1.61 (2)2.607 (2)179 (2)
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Authors:  Prabhakar Priyanka; Bidarur K Jayanna; Haruvegowda Kiran Kumar; Thayamma R Divakara; Hemmige S Yathirajan; Sean Parkin
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-08-18

3.  The methanol and ethanol solvates of 4-glutarato-N,N-diiso-propyl-tryptamine.

Authors:  Marilyn Naeem; Barbara E Bauer; Andrew R Chadeayne; James A Golen; David R Manke
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-09-22
  3 in total

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