| Literature DB >> 31391991 |
Andrew R Chadeayne1, James A Golen2, David R Manke2.
Abstract
The title compound (systematic name: bis-{2-[4-(acet-yloxy)-1H-indol-3-yl]ethan-1-aminium} but-2-enedioate), 2C14H19N2O2 +·C4H2O4 2-, has a single protonated psilacetin cation and one half of a fumarate dianion in the asymmetric unit. There are N-H⋯O hydrogen bonds between the ammonium H atoms and the fumarate O atoms, as well as N-H⋯O hydrogen bonds between the indole H atoms and the fumarate O atoms. The hydrogen bonds hold the ions together in infinite one-dimensional chains along [111].Entities:
Keywords: crystal structure; hydrogen bonding; tryptamines
Year: 2019 PMID: 31391991 PMCID: PMC6658936 DOI: 10.1107/S2056989019007370
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of bis(4-acetoxy-N,N-dimethyltryptammonium) fumarate, showing the atomic labeling. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bonds are shown as dashed lines. Symmetry code: (i) 2 − x, 1 − y, 2 − z.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O4ii | 0.90 (2) | 1.91 (2) | 2.786 (2) | 165 (2) |
| N2—H2⋯O4 | 0.99 (2) | 1.61 (2) | 2.607 (2) | 179 (2) |
Symmetry code: (ii) .
Figure 2The hydrogen bonding of the fumarate ion in the structure of the title compound. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms not involved in hydrogen bonds are omitted for clarity. Symmetry codes: (i) 2 − x, 1 − y, 2 − z, (iii) 1 − x, 1 + y, 1 + z, (iv) 1 − x, −y, 1 − z.
Figure 3The crystal packing of the title compound, viewed along the b axis. The N—H⋯O bonds (Table 1 ▸) are shown as dashed lines. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen atoms not involved in hydrogen bonding are omitted for clarity
Experimental details
| Crystal data | |
| Chemical formula | 2C14H19N2O2 +·C4H2O4 2− |
|
| 608.68 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 200 |
|
| 8.3965 (13), 8.9879 (14), 12.0126 (16) |
| α, β, γ (°) | 101.730 (5), 100.818 (5), 112.463 (5) |
|
| 784.2 (2) |
|
| 1 |
| Radiation type | Mo |
| μ (mm−1) | 0.09 |
| Crystal size (mm) | 0.19 × 0.16 × 0.13 |
| Data collection | |
| Diffractometer | Bruker D8 Venture CMOS |
| Absorption correction | Multi-scan ( |
|
| 0.714, 0.745 |
| No. of measured, independent and observed [ | 21581, 2877, 2087 |
|
| 0.056 |
| (sin θ/λ)max (Å−1) | 0.604 |
| Refinement | |
|
| 0.045, 0.110, 1.03 |
| No. of reflections | 2877 |
| No. of parameters | 210 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.26, −0.20 |
Computer programs: APEX3 and SAINT (Bruker, 2016 ▸), SHELXT2014 (Sheldrick, 2015 ▸), SHELXL97 (Sheldrick, 2008 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| 2C14H19N2O2+·C4H2O42− | |
| Triclinic, | |
| Mo | |
| Cell parameters from 6407 reflections | |
| θ = 3.3–25.1° | |
| α = 101.730 (5)° | µ = 0.09 mm−1 |
| β = 100.818 (5)° | |
| γ = 112.463 (5)° | BLOCK, colourless |
| 0.19 × 0.16 × 0.13 mm |
| Bruker D8 Venture CMOS diffractometer | 2087 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan (SADABS; Bruker, 2016) | θmax = 25.4°, θmin = 3.3° |
| 21581 measured reflections | |
| 2877 independent reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.26 e Å−3 | |
| 2877 reflections | Δρmin = −0.20 e Å−3 |
| 210 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.050 (4) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Occ. (<1) | |||||
| O1 | 0.0322 (2) | 0.33780 (19) | 0.50722 (14) | 0.0539 (4) | |
| O2 | 0.30616 (18) | 0.46535 (16) | 0.48485 (12) | 0.0413 (4) | |
| O3 | 0.6497 (2) | 0.3361 (2) | 1.04226 (12) | 0.0597 (5) | |
| O4 | 0.69101 (17) | 0.29711 (17) | 0.86294 (11) | 0.0386 (4) | |
| N1 | 0.2368 (2) | −0.0732 (2) | 0.29315 (15) | 0.0412 (4) | |
| N2 | 0.3416 (2) | 0.1243 (2) | 0.79890 (13) | 0.0375 (4) | |
| C1 | 0.2567 (4) | 0.5920 (3) | 0.6569 (2) | 0.0578 (6) | |
| H1A | 0.3818 | 0.6670 | 0.6650 | 0.087* | 0.5 |
| H1B | 0.1847 | 0.6558 | 0.6561 | 0.087* | 0.5 |
| H1C | 0.2531 | 0.5457 | 0.7240 | 0.087* | 0.5 |
| H1D | 0.1646 | 0.5787 | 0.6984 | 0.087* | 0.5 |
| H1E | 0.3617 | 0.5899 | 0.7073 | 0.087* | 0.5 |
| H1F | 0.2933 | 0.7000 | 0.6394 | 0.087* | 0.5 |
| C2 | 0.1817 (3) | 0.4512 (3) | 0.54365 (18) | 0.0406 (5) | |
| C3 | 0.2616 (3) | 0.3380 (2) | 0.37872 (17) | 0.0367 (5) | |
| C4 | 0.2330 (3) | 0.3748 (3) | 0.27365 (19) | 0.0482 (6) | |
| H4 | 0.2329 | 0.4804 | 0.2735 | 0.058* | |
| C5 | 0.2040 (3) | 0.2580 (3) | 0.1667 (2) | 0.0572 (7) | |
| H5 | 0.1839 | 0.2852 | 0.0945 | 0.069* | |
| C6 | 0.2041 (3) | 0.1050 (3) | 0.16395 (18) | 0.0491 (6) | |
| H6 | 0.1855 | 0.0261 | 0.0912 | 0.059* | |
| C7 | 0.2325 (2) | 0.0689 (3) | 0.27162 (16) | 0.0361 (5) | |
| C8 | 0.2611 (2) | 0.1833 (2) | 0.38128 (15) | 0.0324 (4) | |
| C9 | 0.2860 (3) | 0.1039 (2) | 0.47124 (16) | 0.0378 (5) | |
| C10 | 0.2697 (3) | −0.0505 (3) | 0.41319 (17) | 0.0428 (5) | |
| H10 | 0.2796 | −0.1313 | 0.4506 | 0.051* | |
| C11 | 0.3232 (4) | 0.1765 (3) | 0.60302 (17) | 0.0552 (7) | |
| H11A | 0.4523 | 0.2569 | 0.6377 | 0.066* | |
| H11B | 0.2518 | 0.2408 | 0.6160 | 0.066* | |
| C12 | 0.2802 (3) | 0.0483 (3) | 0.66691 (16) | 0.0446 (6) | |
| H12A | 0.3380 | −0.0264 | 0.6453 | 0.054* | |
| H12B | 0.1482 | −0.0222 | 0.6407 | 0.054* | |
| C13 | 0.3087 (4) | −0.0104 (3) | 0.8580 (2) | 0.0623 (7) | |
| H13A | 0.3654 | −0.0819 | 0.8298 | 0.094* | |
| H13B | 0.1786 | −0.0794 | 0.8389 | 0.094* | |
| H13C | 0.3603 | 0.0415 | 0.9443 | 0.094* | |
| C14 | 0.2660 (3) | 0.2400 (4) | 0.84318 (19) | 0.0610 (7) | |
| H14A | 0.3073 | 0.2793 | 0.9303 | 0.092* | |
| H14B | 0.1341 | 0.1804 | 0.8159 | 0.092* | |
| H14C | 0.3063 | 0.3371 | 0.8128 | 0.092* | |
| C15 | 0.9426 (3) | 0.4767 (2) | 1.03029 (16) | 0.0346 (5) | |
| H15 | 0.9873 | 0.5193 | 1.1146 | 0.042* | |
| C16 | 0.7463 (3) | 0.3612 (2) | 0.97637 (16) | 0.0340 (5) | |
| H1 | 0.240 (3) | −0.159 (3) | 0.242 (2) | 0.055 (7)* | |
| H2 | 0.475 (3) | 0.191 (3) | 0.8236 (18) | 0.048 (6)* |
| O1 | 0.0506 (10) | 0.0427 (9) | 0.0626 (10) | 0.0148 (8) | 0.0223 (8) | 0.0098 (8) |
| O2 | 0.0381 (8) | 0.0330 (8) | 0.0418 (8) | 0.0099 (6) | 0.0069 (6) | 0.0048 (6) |
| O3 | 0.0445 (9) | 0.0788 (12) | 0.0310 (8) | 0.0068 (8) | 0.0124 (7) | 0.0053 (8) |
| O4 | 0.0332 (8) | 0.0447 (8) | 0.0248 (7) | 0.0120 (6) | 0.0032 (6) | −0.0008 (6) |
| N1 | 0.0449 (11) | 0.0422 (11) | 0.0307 (9) | 0.0198 (9) | 0.0081 (8) | 0.0003 (8) |
| N2 | 0.0323 (9) | 0.0398 (10) | 0.0267 (8) | 0.0065 (8) | 0.0070 (7) | 0.0022 (7) |
| C1 | 0.0716 (17) | 0.0518 (14) | 0.0449 (13) | 0.0323 (13) | 0.0071 (12) | 0.0028 (11) |
| C2 | 0.0472 (13) | 0.0356 (12) | 0.0406 (12) | 0.0208 (11) | 0.0097 (10) | 0.0125 (9) |
| C3 | 0.0318 (11) | 0.0356 (11) | 0.0347 (11) | 0.0086 (9) | 0.0082 (8) | 0.0083 (9) |
| C4 | 0.0514 (14) | 0.0464 (13) | 0.0463 (13) | 0.0165 (11) | 0.0143 (10) | 0.0230 (11) |
| C5 | 0.0671 (16) | 0.0699 (17) | 0.0386 (13) | 0.0257 (13) | 0.0204 (11) | 0.0283 (12) |
| C6 | 0.0501 (13) | 0.0634 (16) | 0.0291 (11) | 0.0189 (12) | 0.0169 (10) | 0.0114 (10) |
| C7 | 0.0287 (10) | 0.0423 (12) | 0.0308 (10) | 0.0106 (9) | 0.0097 (8) | 0.0070 (9) |
| C8 | 0.0254 (10) | 0.0364 (11) | 0.0270 (9) | 0.0082 (8) | 0.0050 (7) | 0.0055 (8) |
| C9 | 0.0436 (12) | 0.0359 (11) | 0.0269 (10) | 0.0170 (9) | 0.0019 (8) | 0.0036 (8) |
| C10 | 0.0511 (13) | 0.0416 (12) | 0.0306 (11) | 0.0217 (10) | 0.0034 (9) | 0.0055 (9) |
| C11 | 0.0909 (19) | 0.0408 (13) | 0.0269 (11) | 0.0334 (13) | −0.0004 (11) | 0.0031 (9) |
| C12 | 0.0386 (12) | 0.0459 (13) | 0.0265 (10) | 0.0036 (10) | 0.0053 (9) | −0.0018 (9) |
| C13 | 0.0717 (17) | 0.0533 (15) | 0.0392 (12) | 0.0026 (13) | 0.0183 (12) | 0.0149 (11) |
| C14 | 0.0548 (15) | 0.091 (2) | 0.0379 (12) | 0.0421 (14) | 0.0129 (11) | 0.0014 (12) |
| C15 | 0.0373 (11) | 0.0371 (11) | 0.0228 (9) | 0.0151 (9) | 0.0025 (7) | 0.0037 (8) |
| C16 | 0.0372 (11) | 0.0350 (11) | 0.0267 (10) | 0.0159 (9) | 0.0065 (8) | 0.0056 (8) |
| O1—C2 | 1.200 (2) | C5—H5 | 0.9500 |
| O2—C2 | 1.349 (2) | C5—C6 | 1.369 (3) |
| O2—C3 | 1.405 (2) | C6—H6 | 0.9500 |
| O3—C16 | 1.228 (2) | C6—C7 | 1.396 (3) |
| O4—C16 | 1.282 (2) | C7—C8 | 1.412 (3) |
| N1—C7 | 1.365 (3) | C8—C9 | 1.437 (3) |
| N1—C10 | 1.373 (3) | C9—C10 | 1.362 (3) |
| N1—H1 | 0.90 (2) | C9—C11 | 1.506 (3) |
| N2—C12 | 1.493 (2) | C10—H10 | 0.9500 |
| N2—C13 | 1.488 (3) | C11—H11A | 0.9900 |
| N2—C14 | 1.475 (3) | C11—H11B | 0.9900 |
| N2—H2 | 0.99 (2) | C11—C12 | 1.480 (3) |
| C1—H1A | 0.9800 | C12—H12A | 0.9900 |
| C1—H1B | 0.9800 | C12—H12B | 0.9900 |
| C1—H1C | 0.9800 | C13—H13A | 0.9800 |
| C1—H1D | 0.9800 | C13—H13B | 0.9800 |
| C1—H1E | 0.9800 | C13—H13C | 0.9800 |
| C1—H1F | 0.9800 | C14—H14A | 0.9800 |
| C1—C2 | 1.489 (3) | C14—H14B | 0.9800 |
| C3—C4 | 1.370 (3) | C14—H14C | 0.9800 |
| C3—C8 | 1.396 (3) | C15—C15i | 1.309 (4) |
| C4—H4 | 0.9500 | C15—H15 | 0.9500 |
| C4—C5 | 1.397 (3) | C15—C16 | 1.494 (3) |
| C2—O2—C3 | 118.62 (15) | C5—C6—C7 | 117.8 (2) |
| C7—N1—C10 | 108.50 (17) | C7—C6—H6 | 121.1 |
| C7—N1—H1 | 126.7 (15) | N1—C7—C6 | 129.45 (19) |
| C10—N1—H1 | 123.8 (15) | N1—C7—C8 | 107.93 (17) |
| C12—N2—H2 | 107.7 (12) | C6—C7—C8 | 122.6 (2) |
| C13—N2—C12 | 110.37 (16) | C3—C8—C7 | 117.04 (17) |
| C13—N2—H2 | 105.4 (12) | C3—C8—C9 | 136.10 (17) |
| C14—N2—C12 | 114.55 (17) | C7—C8—C9 | 106.85 (17) |
| C14—N2—C13 | 111.26 (18) | C8—C9—C11 | 127.06 (18) |
| C14—N2—H2 | 107.1 (12) | C10—C9—C8 | 106.02 (16) |
| H1A—C1—H1B | 109.5 | C10—C9—C11 | 126.91 (18) |
| H1A—C1—H1C | 109.5 | N1—C10—H10 | 124.7 |
| H1A—C1—H1D | 141.1 | C9—C10—N1 | 110.70 (19) |
| H1A—C1—H1E | 56.3 | C9—C10—H10 | 124.7 |
| H1A—C1—H1F | 56.3 | C9—C11—H11A | 108.7 |
| H1B—C1—H1C | 109.5 | C9—C11—H11B | 108.7 |
| H1B—C1—H1D | 56.3 | H11A—C11—H11B | 107.6 |
| H1B—C1—H1E | 141.1 | C12—C11—C9 | 114.06 (17) |
| H1B—C1—H1F | 56.3 | C12—C11—H11A | 108.7 |
| H1C—C1—H1D | 56.3 | C12—C11—H11B | 108.7 |
| H1C—C1—H1E | 56.3 | N2—C12—H12A | 109.0 |
| H1C—C1—H1F | 141.1 | N2—C12—H12B | 109.0 |
| H1D—C1—H1E | 109.5 | C11—C12—N2 | 112.99 (16) |
| H1D—C1—H1F | 109.5 | C11—C12—H12A | 109.0 |
| H1E—C1—H1F | 109.5 | C11—C12—H12B | 109.0 |
| C2—C1—H1A | 109.5 | H12A—C12—H12B | 107.8 |
| C2—C1—H1B | 109.5 | N2—C13—H13A | 109.5 |
| C2—C1—H1C | 109.5 | N2—C13—H13B | 109.5 |
| C2—C1—H1D | 109.5 | N2—C13—H13C | 109.5 |
| C2—C1—H1E | 109.5 | H13A—C13—H13B | 109.5 |
| C2—C1—H1F | 109.5 | H13A—C13—H13C | 109.5 |
| O1—C2—O2 | 122.94 (19) | H13B—C13—H13C | 109.5 |
| O1—C2—C1 | 126.3 (2) | N2—C14—H14A | 109.5 |
| O2—C2—C1 | 110.81 (19) | N2—C14—H14B | 109.5 |
| C4—C3—O2 | 118.17 (19) | N2—C14—H14C | 109.5 |
| C4—C3—C8 | 120.95 (19) | H14A—C14—H14B | 109.5 |
| C8—C3—O2 | 120.68 (17) | H14A—C14—H14C | 109.5 |
| C3—C4—H4 | 119.8 | H14B—C14—H14C | 109.5 |
| C3—C4—C5 | 120.4 (2) | C15i—C15—H15 | 117.7 |
| C5—C4—H4 | 119.8 | C15i—C15—C16 | 124.7 (2) |
| C4—C5—H5 | 119.4 | C16—C15—H15 | 117.7 |
| C6—C5—C4 | 121.2 (2) | O3—C16—O4 | 124.80 (18) |
| C6—C5—H5 | 119.4 | O3—C16—C15 | 118.60 (16) |
| C5—C6—H6 | 121.1 | O4—C16—C15 | 116.59 (16) |
| O2—C3—C4—C5 | 174.36 (19) | C6—C7—C8—C3 | −0.6 (3) |
| O2—C3—C8—C7 | −173.84 (16) | C6—C7—C8—C9 | −179.64 (19) |
| O2—C3—C8—C9 | 4.9 (3) | C7—N1—C10—C9 | 0.4 (2) |
| N1—C7—C8—C3 | −179.97 (16) | C7—C8—C9—C10 | −0.7 (2) |
| N1—C7—C8—C9 | 1.0 (2) | C7—C8—C9—C11 | 179.2 (2) |
| C2—O2—C3—C4 | 107.9 (2) | C8—C3—C4—C5 | −0.5 (3) |
| C2—O2—C3—C8 | −77.2 (2) | C8—C9—C10—N1 | 0.2 (2) |
| C3—O2—C2—O1 | −2.8 (3) | C8—C9—C11—C12 | 159.8 (2) |
| C3—O2—C2—C1 | 176.73 (17) | C9—C11—C12—N2 | 172.04 (19) |
| C3—C4—C5—C6 | −0.3 (4) | C10—N1—C7—C6 | 179.8 (2) |
| C3—C8—C9—C10 | −179.5 (2) | C10—N1—C7—C8 | −0.8 (2) |
| C3—C8—C9—C11 | 0.3 (4) | C10—C9—C11—C12 | −20.4 (4) |
| C4—C3—C8—C7 | 0.9 (3) | C11—C9—C10—N1 | −179.7 (2) |
| C4—C3—C8—C9 | 179.6 (2) | C13—N2—C12—C11 | −175.2 (2) |
| C4—C5—C6—C7 | 0.6 (3) | C14—N2—C12—C11 | 58.3 (3) |
| C5—C6—C7—N1 | 179.1 (2) | C15i—C15—C16—O3 | −174.9 (3) |
| C5—C6—C7—C8 | −0.2 (3) | C15i—C15—C16—O4 | 4.1 (4) |
| H··· | ||||
| N1—H1···O4ii | 0.90 (2) | 1.91 (2) | 2.786 (2) | 165 (2) |
| N2—H2···O4 | 0.99 (2) | 1.61 (2) | 2.607 (2) | 179 (2) |