Literature DB >> 31388213

Genome Sequencing Revealed the Biotechnological Potential of an Obligate Thermophile Geobacillus thermoleovorans Strain RL Isolated from Hot Water Spring.

Durgesh Narain Singh1, Utkarsh Sood1,2, Amit Kumar Singh3, Vipin Gupta1,2, Mallikarjun Shakarad1, Charu Dogra Rawat4, Rup Lal1,2.   

Abstract

In the present study, we report the draft genome sequence of an obligate thermophile Geobacillus thermoleovorans strain RL isolated from Manikaran hot water spring located atop the Himalayan ranges, India. Strain RL grew optimally at 70 °C but not below 45 °C. The draft genome (3.39 Mb) obtained by Illumina sequencing contains 138 contigs with an average G + C content of 52.30%. RAST annotation showed that amino acid metabolism pathways were most dominant followed by carbohydrate metabolism. Genome-wide analysis using NCBI's Prokaryotic Genome Annotation Pipeline revealed that strain RL encodes for a cocktail of industrially important hydrolytic enzymes glycoside hydrolase, α-and β-glucosidase, xylanase, amylase, neopullulanase, pullulanase and lipases required for white biotechnology. In addition, the presence of genes encoding green biocatalyst multicopper polyphenol oxidase (laccase) and an anticancer enzyme l-glutaminase reflects the significance of strain RL in gray and red biotechnology, respectively. Strain RL is a thermophilic multi-enzyme encoding bacterium which could be the source for the recombinant production of biotechnologically significant enzymes. In, addition whole cells of strain RL may be used in bioremediation studies.

Entities:  

Keywords:  Bioremediation; Biotechnology; Draft genome; Geobacillus thermoleovorans; Hydrolytic enzymes; Thermophile

Year:  2019        PMID: 31388213      PMCID: PMC6646505          DOI: 10.1007/s12088-019-00809-x

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  3 in total

1.  Characterization of Cellobiohydrolases from Schizophyllum commune KMJ820.

Authors:  Sanath Kondaveeti; Sanjay K S Patel; Janghun Woo; Ji Hyang Wee; Sang-Yong Kim; Riyadh I Al-Raoush; In-Won Kim; Vipin Chandra Kalia; Jung-Kul Lee
Journal:  Indian J Microbiol       Date:  2019-11-26       Impact factor: 2.461

Review 2.  Current status and applications of genus Geobacillus in the production of industrially important products-a review.

Authors:  Ashutosh Khaswal; Neha Chaturvedi; Santosh Kumar Mishra; Priya Ranjan Kumar; Prabir Kumar Paul
Journal:  Folia Microbiol (Praha)       Date:  2022-02-28       Impact factor: 2.099

3.  Rhus vernicifera Laccase Immobilization on Magnetic Nanoparticles to Improve Stability and Its Potential Application in Bisphenol A Degradation.

Authors:  Sanjay K S Patel; Rahul K Gupta; Sang-Yong Kim; In-Won Kim; Vipin C Kalia; Jung-Kul Lee
Journal:  Indian J Microbiol       Date:  2020-11-19       Impact factor: 2.461

  3 in total

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