Literature DB >> 31384793

Molecular docking, synthesis, kinetics study, structure-activity relationship and ADMET analysis of morin analogous as Helicobacter pylori urease inhibitors.

Ritu Kataria1, Anurag Khatkar2.   

Abstract

BACKGROUND: Urease are responsible for several pathogenic states in human as well as in animals and its inhibition is utmost urgent. Clinically used drugs are associated with many side effects; recently several researches have shown that flavonoids have good urease inhibition properties. Morin, a natural flavonoid has been investigated for urease inhibition studies which includes designing of library of morin analogues and their in-silico evaluation with the help of Schrodinger's maestro package of molecular docking software against crystallographic complex of plant enzyme Jack bean urease (PDB ID: 3LA4) followed by synthesis and in vitro evaluation.
RESULTS: Best thirteen derivatives of morin were selected on the basis of their interaction energy and dock score for synthesis and further investigated for in-vitro antioxidant, urease inhibitory and Anti-H. Pylori activity. In-vitro results revealed that a large number of synthesized compounds were found to possess excellent antioxidant and urease Inhibition properties.
CONCLUSIONS: Among the synthesized compounds, N-(2-chlorophenyl)-N-((4E)-2-(2,4-dihydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-ylidene)thiourea (M2b) and N-(4-bromophenyl)-N-((4E)-2-(2,4-dihydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-ylidene)thiourea (M2i) were found to be most potent urease inhibitor and antioxidant with IC50 value 10.74 ± 0.018, 11.12 ± 0.033 and 7.37 ± 0.024, 7.73 ± 0.015and 7.795 ± 0.003 µM. Derivative M2i exhibited good anti-H. pylori activity having MIC = 500 μg/ml and zone of inhibition 15.00 ± 0.00 mm as compared to standard AHA having MIC = 1000 μg/ml and zone of inhibition 9.00 ± 0.50 mm determined against H. Pylori bacterium (ATCC 43504, DSM 4867) by well diffusion technique. Furthermore, molecular docking study explained the binding pattern of synthesized ligand within active cavity of jack bean protein and drug similarity was explained by ADME studies by quikprop module of molecular docking software.

Entities:  

Keywords:  Antioxidant; Morin; Natural phenolic compounds; Urease inhibition

Year:  2019        PMID: 31384793      PMCID: PMC6661831          DOI: 10.1186/s13065-019-0562-2

Source DB:  PubMed          Journal:  BMC Chem        ISSN: 2661-801X


  33 in total

1.  Evaluation of the antioxidant potential of natural products.

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3.  Glide: a new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening.

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4.  Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy.

Authors:  Richard A Friesner; Jay L Banks; Robert B Murphy; Thomas A Halgren; Jasna J Klicic; Daniel T Mainz; Matthew P Repasky; Eric H Knoll; Mee Shelley; Jason K Perry; David E Shaw; Perry Francis; Peter S Shenkin
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

5.  Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes.

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Journal:  J Med Chem       Date:  2006-10-19       Impact factor: 7.446

6.  Polyphenols based on isoflavones as inhibitors of Helicobacter pylori urease.

Authors:  Zhu-Ping Xiao; Da-Hua Shi; Huan-Qiu Li; Li-Na Zhang; Chen Xu; Hai-Liang Zhu
Journal:  Bioorg Med Chem       Date:  2007-03-18       Impact factor: 3.641

7.  Intestinal anti-inflammatory activity of morin on chronic experimental colitis in the rat.

Authors:  J Gálvez; G Coelho; M E Crespo; T Cruz; M E Rodríguez-Cabezas; A Concha; M Gonzalez; A Zarzuelo
Journal:  Aliment Pharmacol Ther       Date:  2001-12       Impact factor: 8.171

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9.  Synthesis and antibacterial activity of substituted flavones, 4-thioflavones and 4-iminoflavones.

Authors:  Ehsan Ullah Mughal; Muhammad Ayaz; Zakir Hussain; Aurangzeb Hasan; Amina Sadiq; Muhammad Riaz; Abdul Malik; Samreen Hussain; M Iqbal Choudhary
Journal:  Bioorg Med Chem       Date:  2006-04-05       Impact factor: 3.641

10.  Morin sulfates/glucuronides exert anti-inflammatory activity on activated macrophages and decreased the incidence of septic shock.

Authors:  Shih-Hua Fang; Yu-Chi Hou; Weng-Cheng Chang; Su-Lan Hsiu; Pei-Dawn Lee Chao; Bor-Luen Chiang
Journal:  Life Sci       Date:  2003-12-26       Impact factor: 5.037

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  3 in total

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Journal:  In Silico Pharmacol       Date:  2021-03-11

2.  In Silico and In Vitro Anti-Helicobacter Pylori Effects of Combinations of Phytochemicals and Antibiotics.

Authors:  Pedro Fong; Chon-Hou Hao; Chi-Cheng Io; Pou-Io Sin; Li-Rong Meng
Journal:  Molecules       Date:  2019-10-07       Impact factor: 4.411

3.  Preparation, urease inhibition mechanisms, and anti-Helicobacter pylori activities of hesperetin-7-rhamnoglucoside.

Authors:  Mohamed Sharaf; Muhammad Arif; Hamed I Hamouda; Sohaib Khan; Mohnad Abdalla; Samah Shabana; Hussein E Rozan; Tehsin Ullah Khan; Zhe Chi; Chenguang Liu
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