Literature DB >> 31348493

Diverse and dynamic DNA modifications in brain and diseases.

Matthew J Armstrong1, Yulin Jin1, Emily G Allen1, Peng Jin1.   

Abstract

DNA methylation is a class of epigenetic modification essential for coordinating gene expression timing and magnitude throughout normal brain development and for proper brain function following development. Aberrant methylation changes are associated with changes in chromatin architecture, transcriptional alterations and a host of neurological disorders and diseases. This review highlights recent advances in our understanding of the methylome's functionality and covers potential new roles for DNA methylation, their readers, writers, and erasers. Additionally, we examine novel insights into the relationship between the methylome, DNA-protein interactions, and their contribution to neurodegenerative diseases. Lastly, we outline the gaps in our knowledge that will likely be filled through the widespread use of newer technologies that provide greater resolution into how individual cell types are affected by disease and the contribution of each individual modification site to disease pathogenicity.
© The Author(s) 2019. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

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Year:  2019        PMID: 31348493      PMCID: PMC6872432          DOI: 10.1093/hmg/ddz179

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  145 in total

1.  Unexpanded and intermediate CAG polymorphisms at the SCA2 locus (ATXN2) in the Cuban population: evidence about the origin of expanded SCA2 alleles.

Authors:  José Miguel Laffita-Mesa; Luis C Velázquez-Pérez; Nieves Santos Falcón; Tania Cruz-Mariño; Yanetza González Zaldívar; Yaimee Vázquez Mojena; Dennis Almaguer-Gotay; Luis Enrique Almaguer Mederos; Roberto Rodríguez Labrada
Journal:  Eur J Hum Genet       Date:  2011-09-21       Impact factor: 4.246

Review 2.  DNA methylation pathways and their crosstalk with histone methylation.

Authors:  Jiamu Du; Lianna M Johnson; Steven E Jacobsen; Dinshaw J Patel
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09       Impact factor: 94.444

3.  Tet3-Mediated DNA Demethylation Contributes to the Direct Conversion of Fibroblast to Functional Neuron.

Authors:  Juan Zhang; Shuangquan Chen; Dongming Zhang; Zixiao Shi; Hong Li; Tongbiao Zhao; Baoyang Hu; Qi Zhou; Jianwei Jiao
Journal:  Cell Rep       Date:  2016-11-22       Impact factor: 9.423

4.  The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA.

Authors:  Jafar Sharif; Masahiro Muto; Shin-ichiro Takebayashi; Isao Suetake; Akihiro Iwamatsu; Takaho A Endo; Jun Shinga; Yoko Mizutani-Koseki; Tetsuro Toyoda; Kunihiro Okamura; Shoji Tajima; Kohzoh Mitsuya; Masaki Okano; Haruhiko Koseki
Journal:  Nature       Date:  2007-11-11       Impact factor: 49.962

5.  DNA methylation in intron 1 of the frataxin gene is related to GAA repeat length and age of onset in Friedreich ataxia patients.

Authors:  I Castaldo; M Pinelli; A Monticelli; F Acquaviva; M Giacchetti; A Filla; S Sacchetti; S Keller; V E Avvedimento; L Chiariotti; S Cocozza
Journal:  J Med Genet       Date:  2008-08-12       Impact factor: 6.318

Review 6.  DNA damage and its links to neurodegeneration.

Authors:  Ram Madabhushi; Ling Pan; Li-Huei Tsai
Journal:  Neuron       Date:  2014-07-16       Impact factor: 17.173

7.  MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

Authors:  Marian Mellén; Pinar Ayata; Scott Dewell; Skirmantas Kriaucionis; Nathaniel Heintz
Journal:  Cell       Date:  2012-12-21       Impact factor: 41.582

8.  Elevated 5hmC levels characterize DNA of the cerebellum in Parkinson's disease.

Authors:  Reinhard Stöger; Paula J Scaife; Freya Shephard; Lisa Chakrabarti
Journal:  NPJ Parkinsons Dis       Date:  2017-02-01

9.  Repeat-induced epigenetic changes in intron 1 of the frataxin gene and its consequences in Friedreich ataxia.

Authors:  Eriko Greene; Lata Mahishi; Ali Entezam; Daman Kumari; Karen Usdin
Journal:  Nucleic Acids Res       Date:  2007-05-03       Impact factor: 16.971

10.  EMQN best practice guidelines for the molecular genetic testing and reporting of fragile X syndrome and other fragile X-associated disorders.

Authors:  Valérie Biancalana; Dieter Glaeser; Shirley McQuaid; Peter Steinbach
Journal:  Eur J Hum Genet       Date:  2014-09-17       Impact factor: 4.246

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  10 in total

Review 1.  N6-methyladenosine and Neurological Diseases.

Authors:  Nan Zhang; Chunhong Ding; Yuxin Zuo; Yu Peng; Lielian Zuo
Journal:  Mol Neurobiol       Date:  2022-01-15       Impact factor: 5.590

2.  The roles of epigenetic modifications in neurodegenerative diseases.

Authors:  Wenzheng Qu; Yingliang Zhuang; Xuekun Li
Journal:  Zhejiang Da Xue Xue Bao Yi Xue Ban       Date:  2021-10-25

Review 3.  Epigenomic and enhancer dysregulation in uterine leiomyomas.

Authors:  Oliwia W Mlodawska; Priyanka Saini; J Brandon Parker; Jian-Jun Wei; Serdar E Bulun; Melissa A Simon; Debabrata Chakravarti
Journal:  Hum Reprod Update       Date:  2022-06-30       Impact factor: 17.179

Review 4.  Epigenetic Modifications and Their Potential Contribution to Traumatic Brain Injury Pathobiology and Outcome.

Authors:  Laura Zima; Rebecca West; Paul Smolen; Nobuhide Kobori; Georgene Hergenroeder; HuiMahn A Choi; Anthony N Moore; John B Redell; Pramod K Dash
Journal:  J Neurotrauma       Date:  2022-06-14       Impact factor: 4.869

Review 5.  Cannabis and synaptic reprogramming of the developing brain.

Authors:  Anissa Bara; Jacqueline-Marie N Ferland; Gregory Rompala; Henrietta Szutorisz; Yasmin L Hurd
Journal:  Nat Rev Neurosci       Date:  2021-05-21       Impact factor: 38.755

Review 6.  Is an "Epigenetic Diet" for Migraines Justified? The Case of Folate and DNA Methylation.

Authors:  Michal Fila; Cezary Chojnacki; Jan Chojnacki; Janusz Blasiak
Journal:  Nutrients       Date:  2019-11-14       Impact factor: 5.717

7.  Characterization of cerebrospinal fluid DNA methylation age during the acute recovery period following aneurysmal subarachnoid hemorrhage.

Authors:  Lacey W Heinsberg; Dongjing Liu; John R Shaffer; Daniel E Weeks; Yvette P Conley
Journal:  Epigenetics Commun       Date:  2021-12-20

8.  Brominated flame retardants, a cornelian dilemma.

Authors:  Chloé Morel; Henri Schroeder; Claude Emond; Jonathan D Turner; Eric Lichtfouse; Nathalie Grova
Journal:  Environ Chem Lett       Date:  2022-01-23       Impact factor: 9.027

9.  Deciphering the Forebrain Disorder in a Chicken Model of Cerebral Hernia.

Authors:  Yingfeng Tao; Xiaoliu Zhou; Xinting Zheng; Shijun Li; Chunyan Mou
Journal:  Genes (Basel)       Date:  2020-08-27       Impact factor: 4.096

Review 10.  DNA Methylation: A Promising Approach in Management of Alzheimer's Disease and Other Neurodegenerative Disorders.

Authors:  Gagandeep Kaur; Suraj Singh S Rathod; Mohammed M Ghoneim; Sultan Alshehri; Javed Ahmad; Awanish Mishra; Nabil A Alhakamy
Journal:  Biology (Basel)       Date:  2022-01-07
  10 in total

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