Literature DB >> 31327978

Guiding self-organized pattern formation in cell polarity establishment.

Peter Gross1,2,3, K Vijay Kumar4,3, Nathan W Goehring5,6, Justin S Bois7, Carsten Hoege2, Frank Jülicher3, Stephan W Grill1,2,3.   

Abstract

Spontaneous pattern formation in Turing systems relies on feedback. Patterns in cells and tissues however often do not form spontaneously, but are under control of upstream pathways that provide molecular guiding cues. The relationship between guiding cues and feedback in controlled biological pattern formation remains unclear. We explored this relationship during cell polarity establishment in the one-cell-stage C. elegans embryo. We quantified the strength of two feedback systems that operate during polarity establishment, feedback between polarity proteins and the actomyosin cortex, and mutual antagonism amongst polarity proteins. We characterized how these feedback systems are modulated by guiding cues from the centrosome. By coupling a mass-conserved Turing-like reaction-diffusion system for polarity proteins to an active gel description of the actomyosin cortex, we reveal a transition point beyond which feedback ensures self-organized polarization even when cues are removed. Notably, the baton is passed from a guide-dominated to a feedback-dominated regime significantly beyond this transition point, which ensures robustness. Together, this reveals a general criterion for controlling biological pattern forming systems: feedback remains subcritical to avoid unstable behaviour, and molecular guiding cues drive the system beyond a transition point for pattern formation.

Entities:  

Year:  2018        PMID: 31327978      PMCID: PMC6640039          DOI: 10.1038/s41567-018-0358-7

Source DB:  PubMed          Journal:  Nat Phys        ISSN: 1745-2473            Impact factor:   20.034


  45 in total

1.  Cortical flows powered by asymmetrical contraction transport PAR proteins to establish and maintain anterior-posterior polarity in the early C. elegans embryo.

Authors:  Edwin Munro; Jeremy Nance; James R Priess
Journal:  Dev Cell       Date:  2004-09       Impact factor: 12.270

Review 2.  Cell polarity and the cytoskeleton in the Caenorhabditis elegans zygote.

Authors:  Stephan Q Schneider; Bruce Bowerman
Journal:  Annu Rev Genet       Date:  2003       Impact factor: 16.830

Review 3.  The PAR proteins: fundamental players in animal cell polarization.

Authors:  Bob Goldstein; Ian G Macara
Journal:  Dev Cell       Date:  2007-11       Impact factor: 12.270

4.  Sequential functioning of the ECT-2 RhoGEF, RHO-1 and CDC-42 establishes cell polarity in Caenorhabditis elegans embryos.

Authors:  Fumio Motegi; Asako Sugimoto
Journal:  Nat Cell Biol       Date:  2006-08-20       Impact factor: 28.824

5.  Counting cytokinesis proteins globally and locally in fission yeast.

Authors:  Jian-Qiu Wu; Thomas D Pollard
Journal:  Science       Date:  2005-10-14       Impact factor: 47.728

6.  Centrosomes direct cell polarity independently of microtubule assembly in C. elegans embryos.

Authors:  Carrie R Cowan; Anthony A Hyman
Journal:  Nature       Date:  2004-09-02       Impact factor: 49.962

7.  C. elegans PAR proteins function by mobilizing and stabilizing asymmetrically localized protein complexes.

Authors:  Rebecca J Cheeks; Julie C Canman; Willow N Gabriel; Nicole Meyer; Susan Strome; Bob Goldstein
Journal:  Curr Biol       Date:  2004-05-25       Impact factor: 10.834

8.  Genome-wide RNAi screening in Caenorhabditis elegans.

Authors:  Ravi S Kamath; Julie Ahringer
Journal:  Methods       Date:  2003-08       Impact factor: 3.608

9.  Robust single-particle tracking in live-cell time-lapse sequences.

Authors:  Khuloud Jaqaman; Dinah Loerke; Marcel Mettlen; Hirotaka Kuwata; Sergio Grinstein; Sandra L Schmid; Gaudenz Danuser
Journal:  Nat Methods       Date:  2008-07-20       Impact factor: 28.547

10.  A mass conserved reaction-diffusion system captures properties of cell polarity.

Authors:  Mikiya Otsuji; Shuji Ishihara; Carl Co; Kozo Kaibuchi; Atsushi Mochizuki; Shinya Kuroda
Journal:  PLoS Comput Biol       Date:  2007-04-30       Impact factor: 4.475

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  22 in total

Review 1.  Going with the flow: insights from Caenorhabditis elegans zygote polarization.

Authors:  Alicia G Gubieda; John R Packer; Iolo Squires; Jack Martin; Josana Rodriguez
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-08-24       Impact factor: 6.237

2.  Mass Balance Imaging: A Phase Portrait Analysis for Characterizing Growth Kinetics of Biomolecular Condensates.

Authors:  Jan Geisler; Victoria Tianjing Yan; Stephan Grill; Arjun Narayanan
Journal:  Methods Mol Biol       Date:  2023

Review 3.  Advances and challenges in programming pattern formation using living cells.

Authors:  Jia Lu; Emrah Şimşek; Anita Silver; Lingchong You
Journal:  Curr Opin Chem Biol       Date:  2022-04-23       Impact factor: 8.972

4.  A combined in silico and in vivo approach to the structure-function annotation of SPD-2 provides mechanistic insight into its functional diversity.

Authors:  Mikaela Murph; Shaneen Singh; Mara Schvarzstein
Journal:  Cell Cycle       Date:  2022-06-09       Impact factor: 5.173

5.  Stability selection enables robust learning of differential equations from limited noisy data.

Authors:  Suryanarayana Maddu; Bevan L Cheeseman; Ivo F Sbalzarini; Christian L Müller
Journal:  Proc Math Phys Eng Sci       Date:  2022-06-15       Impact factor: 3.213

Review 6.  Orchestration of tissue-scale mechanics and fate decisions by polarity signalling.

Authors:  Martim Dias Gomes; Sandra Iden
Journal:  EMBO J       Date:  2021-05-17       Impact factor: 11.598

7.  Cell lineage-dependent chiral actomyosin flows drive cellular rearrangements in early Caenorhabditis elegans development.

Authors:  Lokesh G Pimpale; Teije C Middelkoop; Alexander Mietke; Stephan W Grill
Journal:  Elife       Date:  2020-07-09       Impact factor: 8.713

8.  Flow Induced Symmetry Breaking in a Conceptual Polarity Model.

Authors:  Manon C Wigbers; Fridtjof Brauns; Ching Yee Leung; Erwin Frey
Journal:  Cells       Date:  2020-06-23       Impact factor: 6.600

9.  A cell size threshold limits cell polarity and asymmetric division potential.

Authors:  Lars Hubatsch; Florent Peglion; Jacob D Reich; Nelio Tl Rodrigues; Nisha Hirani; Rukshala Illukkumbura; Nathan W Goehring
Journal:  Nat Phys       Date:  2019-08-12       Impact factor: 20.034

Review 10.  Roles of Actin in the Morphogenesis of the Early Caenorhabditis elegans Embryo.

Authors:  Dureen Samandar Eweis; Julie Plastino
Journal:  Int J Mol Sci       Date:  2020-05-21       Impact factor: 5.923

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