Literature DB >> 31309618

Mechanisms of mammalian mitochondrial transcription.

Emilie Bouda1, Anthony Stapon1, Miguel Garcia-Diaz1.   

Abstract

Numerous age-related human diseases have been associated with deficiencies in cellular energy production. Moreover, genetic alterations resulting in mitochondrial dysfunction are the cause of inheritable disorders commonly known as mitochondrial diseases. Many of these deficiencies have been directly or indirectly linked to deficits in mitochondrial gene expression. Transcription is an essential step in gene expression and elucidating the molecular mechanisms involved in this process is critical for understanding defects in energy production. For the past five decades, substantial efforts have been invested in the field of mitochondrial transcription. These efforts have led to the discovery of the main protein factors responsible for transcription as well as to a basic mechanistic understanding of the transcription process. They have also revealed various mechanisms of transcriptional regulation as well as the links that exist between the transcription process and downstream processes of RNA maturation. Here, we review the knowledge gathered in early mitochondrial transcription studies and focus on recent findings that shape our current understanding of mitochondrial transcription, posttranscriptional processing, as well as transcriptional regulation in mammalian systems.
© 2019 The Protein Society.

Entities:  

Keywords:  MTERF1; POLRMT; TEFM; TFAM; TFB2M; mitochondrial RNA processing; mitochondrial gene expression; mitochondrial transcription

Mesh:

Substances:

Year:  2019        PMID: 31309618      PMCID: PMC6699104          DOI: 10.1002/pro.3688

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  129 in total

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Authors:  Rafal Tomecki; Aleksandra Dmochowska; Kamil Gewartowski; Andrzej Dziembowski; Piotr P Stepien
Journal:  Nucleic Acids Res       Date:  2004-11-16       Impact factor: 16.971

2.  Mitochondrial ribosomal protein L12 selectively associates with human mitochondrial RNA polymerase to activate transcription.

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-14       Impact factor: 11.205

3.  Initiation of transcription from each of the two human mitochondrial promoters requires unique nucleotides at the transcriptional start sites.

Authors:  J E Hixson; D A Clayton
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

4.  Mapping of nascent light and heavy strand transcripts on the physical map of HeLa cell mitochondrial DNA.

Authors:  P Cantatore; G Attardi
Journal:  Nucleic Acids Res       Date:  1980-06-25       Impact factor: 16.971

5.  A 43-kDa protein related to c-Erb A alpha 1 is located in the mitochondrial matrix of rat liver.

Authors:  C Wrutniak; I Cassar-Malek; S Marchal; A Rascle; S Heusser; J M Keller; J Fléchon; M Dauça; J Samarut; J Ghysdael
Journal:  J Biol Chem       Date:  1995-07-07       Impact factor: 5.157

Review 6.  Maintenance and Expression of Mammalian Mitochondrial DNA.

Authors:  Claes M Gustafsson; Maria Falkenberg; Nils-Göran Larsson
Journal:  Annu Rev Biochem       Date:  2016-03-24       Impact factor: 23.643

7.  Purification and characterization of human mitochondrial transcription factor 1.

Authors:  R P Fisher; D A Clayton
Journal:  Mol Cell Biol       Date:  1988-08       Impact factor: 4.272

8.  Addition of a 29 residue carboxyl-terminal tail converts a simple HMG box-containing protein into a transcriptional activator.

Authors:  D J Dairaghi; G S Shadel; D A Clayton
Journal:  J Mol Biol       Date:  1995-05-26       Impact factor: 5.469

9.  The control region of mitochondrial DNA shows an unusual CpG and non-CpG methylation pattern.

Authors:  Dina Bellizzi; Patrizia D'Aquila; Teresa Scafone; Marco Giordano; Vincenzo Riso; Andrea Riccio; Giuseppe Passarino
Journal:  DNA Res       Date:  2013-06-26       Impact factor: 4.458

10.  Mitochondrial RNA granules: Compartmentalizing mitochondrial gene expression.

Authors:  Alexis A Jourdain; Erik Boehm; Kinsey Maundrell; Jean-Claude Martinou
Journal:  J Cell Biol       Date:  2016-03-07       Impact factor: 10.539

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  10 in total

1.  On separation and coding capacity of mtDNA strands.

Authors:  Mikhail Alexeyev
Journal:  Protein Sci       Date:  2020-02-22       Impact factor: 6.725

Review 2.  Mechanisms of mammalian mitochondrial transcription.

Authors:  Emilie Bouda; Anthony Stapon; Miguel Garcia-Diaz
Journal:  Protein Sci       Date:  2019-07-31       Impact factor: 6.725

3.  Acquisition of cellular properties during alveolar formation requires differential activity and distribution of mitochondria.

Authors:  Kuan Zhang; Erica Yao; Biao Chen; Ethan Chuang; Julia Wong; Robert I Seed; Stephen L Nishimura; Paul J Wolters; Pao-Tien Chuang
Journal:  Elife       Date:  2022-04-06       Impact factor: 8.713

4.  Bioinformatics analysis of epigenetic and SNP-related molecular markers in systemic lupus erythematosus.

Authors:  Shuoshan Xie; Qinghua Zeng; Shaxi Ouyang; Yumei Liang; Changjuan Xiao
Journal:  Am J Transl Res       Date:  2021-06-15       Impact factor: 4.060

Review 5.  Mitochondrial HMG-Box Containing Proteins: From Biochemical Properties to the Roles in Human Diseases.

Authors:  Veronika Vozáriková; Nina Kunová; Jacob A Bauer; Ján Frankovský; Veronika Kotrasová; Katarína Procházková; Vladimíra Džugasová; Eva Kutejová; Vladimír Pevala; Jozef Nosek; Ľubomír Tomáška
Journal:  Biomolecules       Date:  2020-08-16

6.  Base excision repair causes age-dependent accumulation of single-stranded DNA breaks that contribute to Parkinson disease pathology.

Authors:  Tanima SenGupta; Konstantinos Palikaras; Ying Q Esbensen; Georgios Konstantinidis; Francisco Jose Naranjo Galindo; Kavya Achanta; Henok Kassahun; Ioanna Stavgiannoudaki; Vilhelm A Bohr; Mansour Akbari; Johannes Gaare; Charalampos Tzoulis; Nektarios Tavernarakis; Hilde Nilsen
Journal:  Cell Rep       Date:  2021-09-07       Impact factor: 9.423

Review 7.  Mitochondrial DNA Depletion Syndrome and Its Associated Cardiac Disease.

Authors:  Haiying Wang; Yijun Han; Shenwei Li; Yunan Chen; Yafen Chen; Jing Wang; Yuqing Zhang; Yawen Zhang; Jingsuo Wang; Yong Xia; Jinxiang Yuan
Journal:  Front Cardiovasc Med       Date:  2022-02-14

Review 8.  Mitochondrial OXPHOS Biogenesis: Co-Regulation of Protein Synthesis, Import, and Assembly Pathways.

Authors:  Jia Xin Tang; Kyle Thompson; Robert W Taylor; Monika Oláhová
Journal:  Int J Mol Sci       Date:  2020-05-28       Impact factor: 5.923

Review 9.  Structure, mechanism, and regulation of mitochondrial DNA transcription initiation.

Authors:  Urmimala Basu; Alicia M Bostwick; Kalyan Das; Kristin E Dittenhafer-Reed; Smita S Patel
Journal:  J Biol Chem       Date:  2020-10-30       Impact factor: 5.157

Review 10.  PGC-1α protects from myocardial ischaemia-reperfusion injury by regulating mitonuclear communication.

Authors:  Yan-Qing Li; Yan Jiao; Ya-Nan Liu; Jia-Ying Fu; Lian-Kun Sun; Jing Su
Journal:  J Cell Mol Med       Date:  2021-01-19       Impact factor: 5.295

  10 in total

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