Literature DB >> 33127643

Structure, mechanism, and regulation of mitochondrial DNA transcription initiation.

Urmimala Basu1, Alicia M Bostwick2, Kalyan Das3, Kristin E Dittenhafer-Reed4, Smita S Patel5.   

Abstract

Mitochondria are specialized compartments that produce requisite ATP to fuel cellular functions and serve as centers of metabolite processing, cellular signaling, and apoptosis. To accomplish these roles, mitochondria rely on the genetic information in their small genome (mitochondrial DNA) and the nucleus. A growing appreciation for mitochondria's role in a myriad of human diseases, including inherited genetic disorders, degenerative diseases, inflammation, and cancer, has fueled the study of biochemical mechanisms that control mitochondrial function. The mitochondrial transcriptional machinery is different from nuclear machinery. The in vitro re-constituted transcriptional complexes of Saccharomyces cerevisiae (yeast) and humans, aided with high-resolution structures and biochemical characterizations, have provided a deeper understanding of the mechanism and regulation of mitochondrial DNA transcription. In this review, we will discuss recent advances in the structure and mechanism of mitochondrial transcription initiation. We will follow up with recent discoveries and formative findings regarding the regulatory events that control mitochondrial DNA transcription, focusing on those involved in cross-talk between the mitochondria and nucleus.
© 2020 Basu et al.

Entities:  

Keywords:  DNA transcription; RNA polymerase; enzyme mechanism; enzyme structure; human mitochondrial RNA polymerase; mitochondria; mitochondrial DNA (mtDNA); mitochondrial DNA transcription; mitochondrial gene regulation; structure-function; transcription; transcription initiation factors; transcription regulation; yeast mitochondrial RNA polymerase

Mesh:

Substances:

Year:  2020        PMID: 33127643      PMCID: PMC7939475          DOI: 10.1074/jbc.REV120.011202

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  223 in total

Review 1.  Regulation of mitochondrial respiratory chain structure and function by estrogens/estrogen receptors and potential physiological/pathophysiological implications.

Authors:  Jin-Qiang Chen; James D Yager; Jose Russo
Journal:  Biochim Biophys Acta       Date:  2005-08-19

2.  Transcription initiation in a single-subunit RNA polymerase proceeds through DNA scrunching and rotation of the N-terminal subdomains.

Authors:  Guo-Qing Tang; Rahul Roy; Taekjip Ha; Smita S Patel
Journal:  Mol Cell       Date:  2008-06-06       Impact factor: 17.970

Review 3.  Androgen Receptor Structure, Function and Biology: From Bench to Bedside.

Authors:  Rachel A Davey; Mathis Grossmann
Journal:  Clin Biochem Rev       Date:  2016-02

4.  Maternal stress predicts altered biogenesis and the profile of mitochondrial proteins in the frontal cortex and hippocampus of adult offspring rats.

Authors:  Katarzyna Głombik; Aneta Stachowicz; Joanna Ślusarczyk; Ewa Trojan; Bogusława Budziszewska; Maciej Suski; Marta Kubera; Władysław Lasoń; Krzysztof Wędzony; Rafał Olszanecki; Agnieszka Basta-Kaim
Journal:  Psychoneuroendocrinology       Date:  2015-06-28       Impact factor: 4.905

Review 5.  Mitochondria and Cancer.

Authors:  Wei-Xing Zong; Joshua D Rabinowitz; Eileen White
Journal:  Mol Cell       Date:  2016-03-03       Impact factor: 17.970

6.  The structure of a transcribing T7 RNA polymerase in transition from initiation to elongation.

Authors:  Kimberly J Durniak; Scott Bailey; Thomas A Steitz
Journal:  Science       Date:  2008-10-24       Impact factor: 47.728

7.  Purification and characterization of human mitochondrial transcription factor 1.

Authors:  R P Fisher; D A Clayton
Journal:  Mol Cell Biol       Date:  1988-08       Impact factor: 4.272

8.  Addition of a 29 residue carboxyl-terminal tail converts a simple HMG box-containing protein into a transcriptional activator.

Authors:  D J Dairaghi; G S Shadel; D A Clayton
Journal:  J Mol Biol       Date:  1995-05-26       Impact factor: 5.469

9.  The control region of mitochondrial DNA shows an unusual CpG and non-CpG methylation pattern.

Authors:  Dina Bellizzi; Patrizia D'Aquila; Teresa Scafone; Marco Giordano; Vincenzo Riso; Andrea Riccio; Giuseppe Passarino
Journal:  DNA Res       Date:  2013-06-26       Impact factor: 4.458

10.  Corrigendum: The human mitochondrial transcription factor A is a versatile G-quadruplex binding protein.

Authors:  Sébastien Lyonnais; Aleix Tarrés-Solé; Anna Rubio-Cosials; Anna Cuppari; Reicy Brito; Joaquim Jaumot; Raimundo Gargallo; Marta Vilaseca; Cristina Silva; Anton Granzhan; Marie-Paule Teulade-Fichou; Ramon Eritja; Maria Solà
Journal:  Sci Rep       Date:  2017-04-06       Impact factor: 4.379

View more
  10 in total

Review 1.  Epigenetic Modifications and Their Potential Contribution to Traumatic Brain Injury Pathobiology and Outcome.

Authors:  Laura Zima; Rebecca West; Paul Smolen; Nobuhide Kobori; Georgene Hergenroeder; HuiMahn A Choi; Anthony N Moore; John B Redell; Pramod K Dash
Journal:  J Neurotrauma       Date:  2022-06-14       Impact factor: 4.869

Review 2.  How RNases Shape Mitochondrial Transcriptomes.

Authors:  Jérémy Cartalas; Léna Coudray; Anthony Gobert
Journal:  Int J Mol Sci       Date:  2022-05-30       Impact factor: 6.208

Review 3.  Multifunctional Mitochondria-Targeting Nanosystems for Enhanced Anticancer Efficacy.

Authors:  Tingting Hu; Zhou Qin; Chao Shen; Han-Lin Gong; Zhi-Yao He
Journal:  Front Bioeng Biotechnol       Date:  2021-11-24

Review 4.  The Role of Mitochondria Dysfunction in Inflammatory Bowel Diseases and Colorectal Cancer.

Authors:  Patrycja Kłos; Siarhei A Dabravolski
Journal:  Int J Mol Sci       Date:  2021-10-28       Impact factor: 5.923

5.  The Mitochondrial Epigenome: An Unexplored Avenue to Explain Unexplained Myopathies?

Authors:  Archibold Mposhi; Lin Liang; Kevin P Mennega; Dilemin Yildiz; Crista Kampert; Ingrid H Hof; Pytrick G Jellema; Tom J de Koning; Klaas Nico Faber; Marcel H J Ruiters; Klary E Niezen-Koning; Marianne G Rots
Journal:  Int J Mol Sci       Date:  2022-02-16       Impact factor: 5.923

Review 6.  Role of Mitochondrial Stress Response in Cancer Progression.

Authors:  Yu Geon Lee; Do Hong Park; Young Chan Chae
Journal:  Cells       Date:  2022-02-23       Impact factor: 6.600

7.  A Pilot Mitochondrial Genome-Wide Association on Migraine Among Saudi Arabians.

Authors:  Lubna Al Asoom; Johra Khan; Ahmad Al Sunni; Nazish Rafique; Rabia Latif; Majed Alabdali; Sayed AbdulAzeez; J Francis Borgio
Journal:  Int J Gen Med       Date:  2022-07-21

Review 8.  Mini-review: Mitochondrial DNA methylation in type 2 diabetes and obesity.

Authors:  Emma K Rautenberg; Yassin Hamzaoui; Dawn K Coletta
Journal:  Front Endocrinol (Lausanne)       Date:  2022-08-25       Impact factor: 6.055

Review 9.  Dynamic features of human mitochondrial DNA maintenance and transcription.

Authors:  Mansour Akbari; Hilde Loge Nilsen; Nicola Pietro Montaldo
Journal:  Front Cell Dev Biol       Date:  2022-09-07

Review 10.  The Role of Mitochondrial DNA Mutations in Cardiovascular Diseases.

Authors:  Siarhei A Dabravolski; Victoria A Khotina; Vasily N Sukhorukov; Vladislav A Kalmykov; Liudmila M Mikhaleva; Alexander N Orekhov
Journal:  Int J Mol Sci       Date:  2022-01-16       Impact factor: 5.923

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.