| Literature DB >> 31307542 |
Xiaopei Chao1, Lei Li2, Ming Wu1, Shuiqing Ma1, Xianjie Tan1, Sen Zhong1, Yalan Bi3, Jinghe Lang1.
Abstract
BACKGROUND: The prevalence of Lynch syndrome and screening strategies for this disorder in Chinese patients with endometrial cancer have seldom been investigated. Such data would be essential for the screening, prevention, genetic counseling, and treatment of Lynch syndrome. The purpose of this prospective study was to determine the accuracy of the mismatch repair (MMR) protein immunohistochemistry (IHC), microsatellite instability (MSI) test, and clinical diagnostic criteria in screening for Lynch syndrome-associated endometrial cancer (LS-EC) in a prospective Chinese cohort.Entities:
Keywords: DNA mismatch repair genes; Endometrial carcinoma; Germline mutations; Immunohistochemistry; Lynch syndrome; Microsatellite instability
Mesh:
Substances:
Year: 2019 PMID: 31307542 PMCID: PMC6628486 DOI: 10.1186/s40880-019-0388-2
Source DB: PubMed Journal: Cancer Commun (Lond) ISSN: 2523-3548
Fig. 1A flow diagram of the study. IHC: immunohistochemistry; MMR: mismatch repair; MLH1: MutL homolog 1; PMS2: PMS1 homolog 2; MSH2: MutS homolog 2; MSH6: MutS homolog 6; MSI: microsatellite instability; MSI-H: high-frequency MSI; MSS: microsatellite stable
Demographic and clinicopathologic characteristics of the 111 unselected patients with endometrial cancer
| Characteristic | Total | Germline MMR gene mutation | IHC MMR protein | MSI | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Absence | Presence | Intact | Deficient | Negative | Positive | |||||
| Total (cases) | 111 | 105 | 6 | 74 | 28 | 71 | 12 | |||
| Age (years; median [range]) | 56.00 (31–82) | 54.00 (48–57) | 0.440 | 56.50 (32–82) | 53.50 (31–73) | 0.102 | 57.00 (32–82) | 55.00 (40–73) | 0.658 | |
| Gravidity [median (range)] | 2 (0–7) | 2 (0–5) | 0.374 | 2 (0–5) | 2 (0–7) | 0.437 | 2 (0–7) | 2 (0–5) |
| |
| Parity (median, range) | 1 (0–4) | 1 (0–2) | 0.779 | 1 (0–4) | 1 (0–2) | 0.498 | 1 (0–4) | 1 (0–3) | 0.189 | |
| BMI (kg/m2; median [range]) | 24.98 (19–32) | 21.60 (19–23) |
| 25.66 (19–32) | 24.27 (20–32) | 0.622 | 24.98 (19–32) | 23.87 (19–31) | 0.343 | |
| Involvement of the lower uterine segment [cases (%)] | 27 | 24 (22.9) | 3 (50.0) | 0.132 | 17 (23.0) | 9 (32.1) | 0.343 | 14 (19.7) | 4 (33.3) | 0.290 |
| Type of EC [cases (%)] | 0.189 | 0.983 | 0.937 | |||||||
| Type I | 87 | 81 (77.1) | 6 (100.0) | 58 (78.4) | 22 (78.6) | 54 (76.1) | 9 (75.0) | |||
| Type IIa | 24 | 24 (22.9) | 0 (0) | 16 (21.6) | 6 (21.4) | 17 (23.9) | 3 (25.0) | |||
| FIGO stage [cases (%)]b |
| 0.266 | 0.354 | |||||||
| FIGO I | 87 | 85 (81.0) | 2 (33.3) | 61 (82.4) | 19 (67.9) | 60 (84.5) | 9 (75.0) | |||
| FIGO III | 19 | 15 (14.3) | 4 (66.7) | 11 (14.9) | 8 (28.6) | 8 (11.3) | 3 (25.0) | |||
| FIGO IV | 4 | 4 (3.8) | 0 (0) | 2 (2.7) | 1 (3.6) | 3 (4.2) | 0 (0) | |||
| Unknown | 1 | 1 (1.0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | |||
Italic values indicate significance of p value (p < 0.05)
MMR: mismatch repair; IHC: immunohistochemistry; MSI: microsatellite instability; SD: standard deviation; BMI: body mass index; EC: endometrial carcinoma; FIGO: International Federation of Gynecology and Obstetrics
aAmong 24 cases of type II endometrial cancer, there were nine cases of the serous subtype, three of clear cell carcinoma, four of carcinosarcoma, one of undifferentiated carcinoma, and seven cases of mixed carcinoma (four cases of endometrioid and clear cell carcinomas, two cases of the endometrioid and serous subtypes, and one case of endometrioid subtype and carcinosarcoma)
bNo patients had FIGO II disease
The results of germline mutation sequencing, IHC of MMR proteins, and MSI test for the 20 patients with MMR gene mutations
| Case no. | Germline MMR gene mutationa | IHC of MMR proteins | MSI | Amsterdam II criteria | Revised Bethesda guidelines | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene | Transcript | Gene region | Nucleotide | Amino acid | Function change | Mutation type | MLH1 | MSH2 | MSH6 | PMS2 | ||||
| 1 |
| NM_000179.2 | Exon 4 | c.C742T | p.Arg248Ter | Nonsense | Pathogenic | (+) | (+) | (−) | (+) | NA | (−) | (−) |
| 2 |
| NM_000179.2 | Exon 4 | c.C3103T | p.Arg1035Ter | Nonsense | Pathogenic | (+) | (+) | (+) | (+) | MSI-H | (−) | (−) |
| 3 |
| NM_000251.2 | Exon 11 | c.1677_1680delAAAT | p.Asn560Lysfs | Deletion | Likely pathogenic | (+) | (−) | (−) | (+) | NA | (+) | (+) |
| 4 |
| NM_000249.3 | Exon 12 | c.1393dupA | p.Thr465Asnfs | Insertion | Likely pathogenic | (−) | (+) | (+) | (−) | MSI-H | (+) | (+) |
| 5 |
| NM_000251.2 | Exon 12 | c.1813delG | p.Val605Leufs | Deletion | Likely pathogenic | (+) | (+) | (+) | (+) | MSI-H | (−) | (−) |
| 6 |
| NM_000179.2 | Exon 4 | c.2598_2602delAGTAA | p.Lys866Asnfs | Deletion | Likely pathogenic | (+) | (+) | (−) | (+) | MSI-H | (−) | (−) |
| 7 |
| NM_000179.2 | Exon 4 | c.A1828G | p.Lys610Glu | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 8 |
| NM_000535.6 | Exon 14 | c.G2438A | p.Arg813Gln | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 9 |
| NM_000179.2 | Exon 4 | c.C926A | p.Ser309Tyr | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 10 |
| NM_000179.2 | Exon 4 | c.C926G | p.Ser309Cys | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 11 |
| NM_000251.2 | Exon 1 | c.C14A | p.Pro5Gln | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (+) | (−) |
| 12 |
| NM_000179.2 | Exon 4 | c.G1063A | p.Gly355Ser | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 13 |
| NM_000179.2 | Exon 2 | c.A335G | p.Asn112Ser | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 14 |
| NM_000179.2 | Exon 5 | c.C3260G | p.Pro1087Arg | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 15 |
| NM_000179.2 | Exon 10 | c.C4051G | p.His1351Asp | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
| 16 |
| NM_000179.2 | Exon 4 | c.C926G | p.Ser309Cys | Missense | Uncertain significance | (+) | (+) | (−) | (+) | MSI-H | (−) | (−) |
| 17 |
| NM_000179.2 | Exon 4 | c.G1063A | p.Gly355Ser | Missense | Uncertain significance | (−) | (+) | (+) | (−) | MSI-H | (−) | (−) |
| 18 |
| NM_000179.2 | Exon 4 | c.A1828G | p.Lys610Glu | Missense | Uncertain significance | (−) | (+) | (+) | (−) | NA | (−) | (−) |
| 19 |
| NM_000179.2 | Exon 4 | c.A1937G | p.Lys646Arg | Missense | Uncertain significance | (−) | (+) | (+) | (−) | NA | (−) | (−) |
| 20 |
| NM_000251.2 | Exon 1 | c.C14A | p.Pro5Gln | Missense | Uncertain significance | (+) | (+) | (+) | (+) | MSS | (−) | (−) |
MMR: mismatch repair; IHC: immunohistochemistry; MLH1: mutL homolog 1; MSH2: mutS homolog 2; MSH6: mutS homolog 6; MSI: microsatellite instability; PMS2: postmeiotic segregation increased 2 (S. cerevisiae); MSI-H: high-frequency microsatellite instability; MSS: microsatellite stable; NA: not available
aAll the mutations are heterozygous variants
Accuracy of clinical diagnostic criteria, IHC of MMR proteins, and MSI test in screening Lynch syndrome-associated endometrial carcinoma
| Screening method | NGS (cases) | Sensitivity (%) | Specificity (%) | PPV (%) | NPV (%) | |
|---|---|---|---|---|---|---|
| LS-EC | Non-LS-EC | |||||
| Total | 6 | 105 | ||||
| Clinical criteria | 33.3 | 88.6 | 14.3 | 95.9 | ||
| Met | 2 | 12 | ||||
| Unmet | 4 | 93 | ||||
| IHC | 66.7 | 75.0 | 33.3 | 100 | ||
| MMR-deficient | 4 | 24 | ||||
| MMR-intact | 2 | 72 | ||||
| MSI | 100.0 | 89.9 | 33.3 | 100.0 | ||
| Positive | 4 | 8 | ||||
| Negative | 0 | 71 | ||||
| IHC plus MSI | 100.0 | 72.4 | 20.0 | 100.0 | ||
| MMR-deficient or MSI-positive | 6 | 24 | ||||
| MMR-intact and MSI-negative | 0 | 63 | ||||
Due to insufficient tumor tissues for examination, IHC was performed for only 102 patients, and MSI test was performed for 83 patients
IHC: immunohistochemistry; MMR: mismatch repair; MSI: microsatellite instability; NGS: next-generation sequencing; LS-EC: Lynch syndrome-associated endometrial carcinoma; NPV: negative predictive value; PPV: positive predictive value
Fig. 2An example of immunohistochemistry (IHC) of mismatch repair (MMR) proteins from Case 4 in Table 2. This patient was 53 years at diagnosis and was confirmed to have grade 1 stage IA uterine endometrioid carcinoma. Two years before the diagnosis of endometrial cancer, she was diagnosed with early-stage colon cancer. Her father and daughter had a history of colon cancer and small intestine cancer, respectively. a Deficient expression of MutL homolog 1 (MLH1) protein in tumor tissues. The cytoplasm of almost all cancer cells had no staining in brown. b Normal expression of MutS homolog 2 (MSH2) protein in tumor tissues. The cytoplasm of cancer cells had homogeneous brown staining. c Normal expression of MutS homolog 6 (MSH6) protein in tumor tissues. The cytoplasm of cancer cells had homogeneous brown staining. d Deficient expression of PMS1 homolog 2 (PMS2) protein in tumor tissues. The cytoplasm of all cancer cells had no staining in brown
Fig. 3An example of MSI-H of Case 4 in Table 2. The introduction of this patient refers to the legend of Fig. 2. Electropherogram shows an allelic profile generated from a normal sample (a, b) or from a matching MSH6-deficient tumor sample (c, d) using the MSI detection kit. First, the sex-determination site Amel and the pentanucleotide markers Penta C and Penta D were analyzed. The Amel site and Penta C/Penta D were used to confirm that the tumor sample and the corresponding normal sample were from the same individual. Alleles found in the normal sample should also be present in the tumor sample; otherwise, there may be sample mixing or contamination. In this case, it is advisable to re-extract the sample for testing. The control sample (paraffin-embedded paracancerous tissue) is microsatellite stable (MSS). In this paraffin-embedded tumor tissue (d), a new allele appears compared to the normal sample (b) (new allele peak indicated by the arrow), that is, the mononucleotide repeat markers are unstable. Finally, the results were interpreted by comparing the numbers of changes in the mononucleotide repeat markers in the test samples. Note that additional pentanucleotide alleles of Penta C and Penta D may be present in some MSI-H samples (additional allele peaks indicated by the box are detailed in d)