Literature DB >> 31278804

Metal-dependent assembly of a protein nano-cage.

Ajitha S Cristie-David1, E Neil G Marsh1,2.   

Abstract

Short, alpha-helical coiled coils provide a simple, modular method to direct the assembly of proteins into higher order structures. We previously demonstrated that by genetically fusing de novo-designed coiled coils of the appropriate oligomerization state to a natural trimeric protein, we could direct the assembly of this protein into various geometrical cages. Here, we have extended this approach by appending a coiled coil designed to trimerize in response to binding divalent transition metal ions and thereby achieve metal ion-dependent assembly of a tetrahedral protein cage. Ni2+ , Co2+ , Cu2+ , and Zn2+ ions were evaluated, with Ni2+ proving the most effective at mediating protein assembly. Characterization of the assembled protein indicated that the metal ion-protein complex formed discrete globular structures of the diameter expected for a complex containing 12 copies of the protein monomer. Protein assembly could be reversed by removing metal ions with ethylenediaminetetraacetic acid or under mildly acidic conditions.
© 2019 The Protein Society.

Entities:  

Keywords:  coiled coils; metalloproteins; protein design; protein nano-cages

Mesh:

Substances:

Year:  2019        PMID: 31278804      PMCID: PMC6699099          DOI: 10.1002/pro.3676

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  41 in total

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Authors:  Philippe Ringler; Georg E Schulz
Journal:  Science       Date:  2003-10-03       Impact factor: 47.728

2.  Engineered protein cages for nanomaterial synthesis.

Authors:  Ryan M Kramer; Chester Li; Daniel C Carter; Morley O Stone; Rajesh R Naik
Journal:  J Am Chem Soc       Date:  2004-10-20       Impact factor: 15.419

3.  Elaborating a coiled-coil-assembled octahedral protein cage with additional protein domains.

Authors:  Ajitha S Cristie-David; Philipp Koldewey; Ben A Meinen; James C A Bardwell; E Neil G Marsh
Journal:  Protein Sci       Date:  2018-10-03       Impact factor: 6.725

4.  Re-engineering protein interfaces yields copper-inducible ferritin cage assembly.

Authors:  Dustin J E Huard; Kathleen M Kane; F Akif Tezcan
Journal:  Nat Chem Biol       Date:  2013-01-20       Impact factor: 15.040

5.  Self-assembly of glutathione S-transferase into nanowires.

Authors:  Wei Zhang; Quan Luo; Lu Miao; Chunxi Hou; Yushi Bai; Zeyuan Dong; Jiayun Xu; Junqiu Liu
Journal:  Nanoscale       Date:  2012-08-21       Impact factor: 7.790

6.  Evaluation of a symmetry-based strategy for assembling protein complexes.

Authors:  Dustin P Patterson; Ankur M Desai; Mark M Banaszak Holl; E Neil G Marsh
Journal:  RSC Adv       Date:  2011-10-21       Impact factor: 3.361

Review 7.  Actin structure and function.

Authors:  Roberto Dominguez; Kenneth C Holmes
Journal:  Annu Rev Biophys       Date:  2011       Impact factor: 12.981

Review 8.  Applications of viral nanoparticles in medicine.

Authors:  Ibrahim Yildiz; Sourabh Shukla; Nicole F Steinmetz
Journal:  Curr Opin Biotechnol       Date:  2011-05-16       Impact factor: 9.740

9.  Controlled integration of polymers into viral capsids.

Authors:  Marta Comellas-Aragonès; Andrés de la Escosura; A Ton J Dirks; Anne van der Ham; Anna Fusté-Cuñé; Jeroen J L M Cornelissen; Roeland J M Nolte
Journal:  Biomacromolecules       Date:  2009-11-09       Impact factor: 6.988

10.  Design of a hyperstable 60-subunit protein dodecahedron. [corrected].

Authors:  Yang Hsia; Jacob B Bale; Shane Gonen; Dan Shi; William Sheffler; Kimberly K Fong; Una Nattermann; Chunfu Xu; Po-Ssu Huang; Rashmi Ravichandran; Sue Yi; Trisha N Davis; Tamir Gonen; Neil P King; David Baker
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

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  7 in total

1.  Metal-dependent assembly of a protein nano-cage.

Authors:  Ajitha S Cristie-David; E Neil G Marsh
Journal:  Protein Sci       Date:  2019-08-06       Impact factor: 6.725

Review 2.  Protein Assembly by Design.

Authors:  Jie Zhu; Nicole Avakyan; Albert Kakkis; Alexander M Hoffnagle; Kenneth Han; Yiying Li; Zhiyin Zhang; Tae Su Choi; Youjeong Na; Chung-Jui Yu; F Akif Tezcan
Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

Review 3.  Engineering spatiotemporal organization and dynamics in synthetic cells.

Authors:  Alessandro Groaz; Hossein Moghimianavval; Franco Tavella; Tobias W Giessen; Anthony G Vecchiarelli; Qiong Yang; Allen P Liu
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2020-11-21

4.  Design of metal-mediated protein assemblies via hydroxamic acid functionalities.

Authors:  Rohit H Subramanian; Jie Zhu; Jake B Bailey; Jerika A Chiong; Yiying Li; Eyal Golub; F Akif Tezcan
Journal:  Nat Protoc       Date:  2021-05-28       Impact factor: 13.491

5.  Chemically induced protein cage assembly with programmable opening and cargo release.

Authors:  Izabela Stupka; Yusuke Azuma; Artur P Biela; Motonori Imamura; Simon Scheuring; Elżbieta Pyza; Olga Woźnicka; Daniel P Maskell; Jonathan G Heddle
Journal:  Sci Adv       Date:  2022-01-05       Impact factor: 14.136

Review 6.  Connectability of protein cages.

Authors:  Karolina Majsterkiewicz; Yusuke Azuma; Jonathan G Heddle
Journal:  Nanoscale Adv       Date:  2020-05-18

7.  Constructing protein polyhedra via orthogonal chemical interactions.

Authors:  Eyal Golub; Rohit H Subramanian; Julian Esselborn; Robert G Alberstein; Jake B Bailey; Jerika A Chiong; Xiaodong Yan; Timothy Booth; Timothy S Baker; F Akif Tezcan
Journal:  Nature       Date:  2020-01-22       Impact factor: 49.962

  7 in total

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