Literature DB >> 31276120

Lessons Learned in the Development of a Computable Phenotype for Response in Myeloproliferative Neoplasms.

Evan Sholle1, Spencer Krichevsky2, Joseph Scandura2, Claudia Sosner3, Thomas R Campion4.   

Abstract

Determining response status in patients with myeloproliferative neoplasms is a complex problem requiring the integration of both structured and unstructured data elements from disparate information systems. By applying multiple techniques, a collaborative team of informatics professionals and research personnel were able to determine which elements were amenable to automated extraction and which required expert adjudication. With this knowledge in mind, we were able to build a system that joins together programmatically-derived and manually-abstracted data elements to facilitate response assessment - an important end point in clinical and translational research in this disease area.

Entities:  

Keywords:  cancer; clinical research informatics; computable phenotype; data mining; natural language processing; secondary use

Year:  2018        PMID: 31276120      PMCID: PMC6608705          DOI: 10.1109/ICHI.2018.00045

Source DB:  PubMed          Journal:  IEEE Int Conf Healthc Inform        ISSN: 2575-2626


  3 in total

1.  Secondary Use of Patients' Electronic Records (SUPER): An Approach for Meeting Specific Data Needs of Clinical and Translational Researchers.

Authors:  Evan T Sholle; Joseph Kabariti; Stephen B Johnson; John P Leonard; Jyotishman Pathak; Vinay I Varughese; Curtis L Cole; Thomas R Campion
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

2.  Revised response criteria for myelofibrosis: International Working Group-Myeloproliferative Neoplasms Research and Treatment (IWG-MRT) and European LeukemiaNet (ELN) consensus report.

Authors:  Ayalew Tefferi; Francisco Cervantes; Ruben Mesa; Francesco Passamonti; Srdan Verstovsek; Alessandro M Vannucchi; Jason Gotlib; Brigitte Dupriez; Animesh Pardanani; Claire Harrison; Ronald Hoffman; Heinz Gisslinger; Nicolaus Kröger; Juergen Thiele; Tiziano Barbui; Giovanni Barosi
Journal:  Blood       Date:  2013-07-09       Impact factor: 22.113

3.  Next-generation phenotyping of electronic health records.

Authors:  George Hripcsak; David J Albers
Journal:  J Am Med Inform Assoc       Date:  2012-09-06       Impact factor: 4.497

  3 in total
  3 in total

1.  An architecture for research computing in health to support clinical and translational investigators with electronic patient data.

Authors:  Thomas R Campion; Evan T Sholle; Jyotishman Pathak; Stephen B Johnson; John P Leonard; Curtis L Cole
Journal:  J Am Med Inform Assoc       Date:  2022-03-15       Impact factor: 4.497

Review 2.  Synthesizing Dimensions of Digital Maturity in Hospitals: Systematic Review.

Authors:  Rhona Duncan; Rebekah Eden; Leanna Woods; Ides Wong; Clair Sullivan
Journal:  J Med Internet Res       Date:  2022-03-30       Impact factor: 5.428

3.  Electronic Medical Record Search Engine (EMERSE): An Information Retrieval Tool for Supporting Cancer Research.

Authors:  David A Hanauer; Jill S Barnholtz-Sloan; Mark F Beno; Guilherme Del Fiol; Eric B Durbin; Oksana Gologorskaya; Daniel Harris; Brett Harnett; Kensaku Kawamoto; Benjamin May; Eric Meeks; Emily Pfaff; Janie Weiss; Kai Zheng
Journal:  JCO Clin Cancer Inform       Date:  2020-05
  3 in total

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