Literature DB >> 31265809

In Vivo Developmental Trajectories of Human Podocyte Inform In Vitro Differentiation of Pluripotent Stem Cell-Derived Podocytes.

Tracy Tran1, Nils O Lindström1, Andrew Ransick1, Guilherme De Sena Brandine2, Qiuyu Guo1, Albert D Kim1, Balint Der3, Janos Peti-Peterdi3, Andrew D Smith2, Matthew Thornton4, Brendan Grubbs4, Jill A McMahon1, Andrew P McMahon5.   

Abstract

The renal corpuscle of the kidney comprises a glomerular vasculature embraced by podocytes and supported by mesangial myofibroblasts, which ensure plasma filtration at the podocyte-generated slit diaphragm. With a spectrum of podocyte-expressed gene mutations causing chronic disease, an enhanced understanding of podocyte development and function to create relevant in vitro podocyte models is a clinical imperative. To characterize podocyte development, scRNA-seq was performed on human fetal kidneys, identifying distinct transcriptional signatures accompanying the differentiation of functional podocytes from progenitors. Interestingly, organoid-generated podocytes exhibited highly similar, progressive transcriptional profiles despite an absence of the vasculature, although abnormal gene expression was pinpointed in late podocytes. On transplantation into mice, organoid-derived podocytes recruited the host vasculature and partially corrected transcriptional profiles. Thus, human podocyte development is mostly intrinsically regulated and vascular interactions refine maturation. These studies support the application of organoid-derived podocytes to model disease and to restore or replace normal kidney functions.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  development; human kidney; nephron; organoid; podocyte; stem cell differentiation

Mesh:

Year:  2019        PMID: 31265809      PMCID: PMC6684316          DOI: 10.1016/j.devcel.2019.06.001

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  81 in total

1.  Kidney development in cadherin-6 mutants: delayed mesenchyme-to-epithelial conversion and loss of nephrons.

Authors:  S P Mah; H Saueressig; M Goulding; C Kintner; G R Dressler
Journal:  Dev Biol       Date:  2000-07-01       Impact factor: 3.582

2.  Semaphorin3a regulates endothelial cell number and podocyte differentiation during glomerular development.

Authors:  Kimberly J Reidy; Guillermo Villegas; Jason Teichman; Delma Veron; Wa Shen; Juan Jimenez; David Thomas; Alda Tufro
Journal:  Development       Date:  2009-12       Impact factor: 6.868

3.  Six1 is required for the early organogenesis of mammalian kidney.

Authors:  Pin-Xian Xu; Weiming Zheng; Li Huang; Pascal Maire; Christine Laclef; Derek Silvius
Journal:  Development       Date:  2003-07       Impact factor: 6.868

4.  High-Throughput Screening Enhances Kidney Organoid Differentiation from Human Pluripotent Stem Cells and Enables Automated Multidimensional Phenotyping.

Authors:  Stefan M Czerniecki; Nelly M Cruz; Jennifer L Harder; Rajasree Menon; James Annis; Edgar A Otto; Ramila E Gulieva; Laura V Islas; Yong Kyun Kim; Linh M Tran; Timothy J Martins; Jeffrey W Pippin; Hongxia Fu; Matthias Kretzler; Stuart J Shankland; Jonathan Himmelfarb; Randall T Moon; Neal Paragas; Benjamin S Freedman
Journal:  Cell Stem Cell       Date:  2018-05-17       Impact factor: 24.633

5.  Differential regulation of mouse and human nephron progenitors by the Six family of transcriptional regulators.

Authors:  Lori L O'Brien; Qiuyu Guo; YoungJin Lee; Tracy Tran; Jean-Denis Benazet; Peter H Whitney; Anton Valouev; Andrew P McMahon
Journal:  Development       Date:  2016-02-15       Impact factor: 6.868

6.  Deducing the stage of origin of Wilms' tumours from a developmental series of Wt1-mutant mice.

Authors:  Rachel L Berry; Derya D Ozdemir; Bruce Aronow; Nils O Lindström; Tatiana Dudnakova; Anna Thornburn; Paul Perry; Richard Baldock; Chris Armit; Anagha Joshi; Cécile Jeanpierre; Jingdong Shan; Seppo Vainio; James Baily; David Brownstein; Jamie Davies; Nicholas D Hastie; Peter Hohenstein
Journal:  Dis Model Mech       Date:  2015-05-14       Impact factor: 5.758

7.  A draft network of ligand-receptor-mediated multicellular signalling in human.

Authors:  Jordan A Ramilowski; Tatyana Goldberg; Jayson Harshbarger; Edda Kloppmann; Edda Kloppman; Marina Lizio; Venkata P Satagopam; Masayoshi Itoh; Hideya Kawaji; Piero Carninci; Burkhard Rost; Alistair R R Forrest
Journal:  Nat Commun       Date:  2015-07-22       Impact factor: 14.919

8.  Focal segmental glomerulosclerosis is induced by microRNA-193a and its downregulation of WT1.

Authors:  Christoph A Gebeshuber; Christoph Kornauth; Lihua Dong; Ralph Sierig; Jost Seibler; Martina Reiss; Stefanie Tauber; Martin Bilban; Shijun Wang; Renate Kain; Georg A Böhmig; Marcus J Moeller; Hermann-Josef Gröne; Christoph Englert; Javier Martinez; Dontscho Kerjaschki
Journal:  Nat Med       Date:  2013-03-17       Impact factor: 53.440

9.  TopHat: discovering splice junctions with RNA-Seq.

Authors:  Cole Trapnell; Lior Pachter; Steven L Salzberg
Journal:  Bioinformatics       Date:  2009-03-16       Impact factor: 6.937

10.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

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  26 in total

Review 1.  Mapping the human kidney using single-cell genomics.

Authors:  Felix Schreibing; Rafael Kramann
Journal:  Nat Rev Nephrol       Date:  2022-03-17       Impact factor: 28.314

Review 2.  Regrow or Repair: An Update on Potential Regenerative Therapies for the Kidney.

Authors:  Melissa H Little; Benjamin D Humphreys
Journal:  J Am Soc Nephrol       Date:  2021-11-17       Impact factor: 10.121

Review 3.  Determining lineage relationships in kidney development and disease.

Authors:  Melissa H Little; Sara E Howden; Kynan T Lawlor; Jessica M Vanslambrouck
Journal:  Nat Rev Nephrol       Date:  2021-09-30       Impact factor: 28.314

Review 4.  Principles of human and mouse nephron development.

Authors:  Jack Schnell; MaryAnne Achieng; Nils Olof Lindström
Journal:  Nat Rev Nephrol       Date:  2022-07-22       Impact factor: 42.439

5.  Spatial transcriptional mapping of the human nephrogenic program.

Authors:  Nils O Lindström; Rachel Sealfon; Xi Chen; Riana K Parvez; Andrew Ransick; Guilherme De Sena Brandine; Jinjin Guo; Bill Hill; Tracy Tran; Albert D Kim; Jian Zhou; Alicja Tadych; Aaron Watters; Aaron Wong; Elizabeth Lovero; Brendan H Grubbs; Matthew E Thornton; Jill A McMahon; Andrew D Smith; Seth W Ruffins; Chris Armit; Olga G Troyanskaya; Andrew P McMahon
Journal:  Dev Cell       Date:  2021-08-23       Impact factor: 13.417

6.  Identification and characterization of cellular heterogeneity within the developing renal interstitium.

Authors:  Alicia R England; Christopher P Chaney; Amrita Das; Mohita Patel; Alicia Malewska; Daniel Armendariz; Gary C Hon; Douglas W Strand; Keri A Drake; Thomas J Carroll
Journal:  Development       Date:  2020-08-14       Impact factor: 6.868

7.  Plasticity of distal nephron epithelia from human kidney organoids enables the induction of ureteric tip and stalk.

Authors:  Sara E Howden; Sean B Wilson; Ella Groenewegen; Lakshi Starks; Thomas A Forbes; Ker Sin Tan; Jessica M Vanslambrouck; Emily M Holloway; Yi-Hsien Chen; Sanjay Jain; Jason R Spence; Melissa H Little
Journal:  Cell Stem Cell       Date:  2020-12-29       Impact factor: 24.633

Review 8.  Biomimetic models of the glomerulus.

Authors:  Marta G Valverde; Luis S Mille; Kianti P Figler; Ernesto Cervantes; Vanessa Y Li; Joseph V Bonventre; Rosalinde Masereeuw; Yu Shrike Zhang
Journal:  Nat Rev Nephrol       Date:  2022-01-21       Impact factor: 28.314

Review 9.  Studying Kidney Diseases at the Single-Cell Level.

Authors:  Mengmeng Jiang; Haide Chen; Guoji Guo
Journal:  Kidney Dis (Basel)       Date:  2021-07-05

Review 10.  The Utility of Human Kidney Organoids in Modeling Kidney Disease.

Authors:  Aneta Przepiorski; Amanda E Crunk; Eugenel B Espiritu; Neil A Hukriede; Alan J Davidson
Journal:  Semin Nephrol       Date:  2020-03       Impact factor: 5.299

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