Literature DB >> 31213126

RNA-induced initiation of transcriptional silencing (RITS) complex structure and function.

Sonali Bhattacharjee1, Benjamin Roche1, Robert A Martienssen1.   

Abstract

Heterochromatic regions of the genome are epigenetically regulated to maintain a heritable '"silent state"'. In fission yeast and other organisms, epigenetic silencing is guided by nascent transcripts, which are targeted by the RNA interference pathway. The key effector complex of the RNA interference pathway consists of small interfering RNA molecules (siRNAs) associated with Argonaute, assembled into the RNA-induced transcriptional silencing (RITS) complex. This review focuses on our current understanding of how RITS promotes heterochromatin formation, and in particular on the role of Argonaute-containing complexes in many other functions such as quelling, release of RNA polymerases, cellular quiescence and genome defense.

Entities:  

Keywords:  DNA repair; RITS; RNA; RNAi; argonaute; cell cycle; dicer; epigenetics; genome defense; quelling; quiescence; silencing

Mesh:

Substances:

Year:  2019        PMID: 31213126      PMCID: PMC6693537          DOI: 10.1080/15476286.2019.1621624

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  201 in total

Review 1.  Heterochromatin: new possibilities for the inheritance of structure.

Authors:  Shiv I S Grewal; Sarah C R Elgin
Journal:  Curr Opin Genet Dev       Date:  2002-04       Impact factor: 5.578

2.  Maintenance of heterochromatin by RNA interference of tandem repeats.

Authors:  Robert A Martienssen
Journal:  Nat Genet       Date:  2003-11       Impact factor: 38.330

Review 3.  Revealing the world of RNA interference.

Authors:  Craig C Mello; Darryl Conte
Journal:  Nature       Date:  2004-09-16       Impact factor: 49.962

4.  An antisense RNA-mediated mechanism eliminates a meiosis-specific copper-regulated transcript in mitotic cells.

Authors:  Vincent Normant; Jude Beaudoin; Simon Labbé
Journal:  J Biol Chem       Date:  2015-07-30       Impact factor: 5.157

5.  Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

Authors:  Mohammad R Motamedi; André Verdel; Serafin U Colmenares; Scott A Gerber; Steven P Gygi; Danesh Moazed
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

Review 6.  The role of heterochromatin in centromere function.

Authors:  Alison L Pidoux; Robin C Allshire
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-03-29       Impact factor: 6.237

Review 7.  Conserved RNA polymerase II initiation complex structure.

Authors:  Merle Hantsche; Patrick Cramer
Journal:  Curr Opin Struct Biol       Date:  2017-04-22       Impact factor: 6.809

8.  A viral suppressor of RNA silencing inhibits ARGONAUTE 1 function by precluding target RNA binding to pre-assembled RISC.

Authors:  Erzsébet Kenesi; Alberto Carbonell; Rita Lózsa; Beáta Vértessy; Lóránt Lakatos
Journal:  Nucleic Acids Res       Date:  2017-07-27       Impact factor: 16.971

9.  RNA interference (RNAi)-dependent and RNAi-independent association of the Chp1 chromodomain protein with distinct heterochromatic loci in fission yeast.

Authors:  Victoria J Petrie; Jeffrey D Wuitschick; Cheryl D Givens; Aaron M Kosinski; Janet F Partridge
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

Review 10.  Perturbations at the ribosomal genes loci are at the centre of cellular dysfunction and human disease.

Authors:  Jeannine Diesch; Ross D Hannan; Elaine Sanij
Journal:  Cell Biosci       Date:  2014-08-19       Impact factor: 7.133

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  9 in total

1.  Identification of novel, functional, long noncoding RNAs involved in programmed, large-scale genome rearrangements.

Authors:  Sebastian T Bechara; Lyna E S Kabbani; Xyrus X Maurer-Alcalá; Mariusz Nowacki
Journal:  RNA       Date:  2022-06-09       Impact factor: 5.636

2.  Two Piwis with Ago-like functions silence somatic genes at the chromatin level.

Authors:  Franziska Drews; Sivarajan Karunanithi; Ulrike Götz; Simone Marker; Raphael deWijn; Marcello Pirritano; Angela M Rodrigues-Viana; Martin Jung; Gilles Gasparoni; Marcel H Schulz; Martin Simon
Journal:  RNA Biol       Date:  2021-10-18       Impact factor: 4.766

3.  Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses.

Authors:  Pawel Sega; Katarzyna Kruszka; Dawid Bielewicz; Wojciech Karlowski; Przemyslaw Nuc; Zofia Szweykowska-Kulinska; Andrzej Pacak
Journal:  BMC Genomics       Date:  2021-03-09       Impact factor: 3.969

Review 4.  The Evolutionary Significance of RNAi in the Fungal Kingdom.

Authors:  Carlos Lax; Ghizlane Tahiri; José Alberto Patiño-Medina; José T Cánovas-Márquez; José A Pérez-Ruiz; Macario Osorio-Concepción; Eusebio Navarro; Silvia Calo
Journal:  Int J Mol Sci       Date:  2020-12-08       Impact factor: 5.923

Review 5.  Cell Penetrating Peptides Used in Delivery of Therapeutic Oligonucleotides Targeting Hepatitis B Virus.

Authors:  Bénédicte Ndeboko; Serge Thierry Omouessi; Brice Ongali; Augustin Mouinga-Ondémé
Journal:  Pharmaceuticals (Basel)       Date:  2020-12-21

6.  Prediction of the VeriStrat test in first-line therapy of pemetrexed-based regimens for advanced lung adenocarcinoma patients.

Authors:  Bo Jia; Zhi Dong; Di Wu; Jun Zhao; Meina Wu; Tongtong An; Yuyan Wang; Minglei Zhuo; Jianjie Li; Yang Wang; Jie Zhang; Xinghui Zhao; Sheng Li; Junfeng Li; Menglei Ma; Chen Chen; Xue Yang; Jia Zhong; Hanxiao Chen; Jingjing Wang; Yujia Chi; Xiaoyu Zhai; Song Cui; Rong Zhang; Qingwei Ma; Jian Fang; Ziping Wang
Journal:  Cancer Cell Int       Date:  2020-12-09       Impact factor: 5.722

7.  Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2.

Authors:  Akihito Fukudome; Jasleen Singh; Vibhor Mishra; Eswar Reddem; Francisco Martinez-Marquez; Sabine Wenzel; Rui Yan; Momoko Shiozaki; Zhiheng Yu; Joseph Che-Yen Wang; Yuichiro Takagi; Craig S Pikaard
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-21       Impact factor: 11.205

8.  Independent phenotypic plasticity axes define distinct obesity sub-types.

Authors:  Chih-Hsiang Yang; Luca Fagnocchi; Stefanos Apostle; Vanessa Wegert; Salvador Casaní-Galdón; Kathrin Landgraf; Ilaria Panzeri; Erez Dror; Steffen Heyne; Till Wörpel; Darrell P Chandler; Di Lu; Tao Yang; Elizabeth Gibbons; Rita Guerreiro; Jose Bras; Martin Thomasen; Louise G Grunnet; Allan A Vaag; Linn Gillberg; Elin Grundberg; Ana Conesa; Antje Körner; J Andrew Pospisilik
Journal:  Nat Metab       Date:  2022-09-12

9.  Prokaryotic Argonaute Proteins as a Tool for Biotechnology.

Authors:  E V Kropocheva; L A Lisitskaya; A A Agapov; A A Musabirov; A V Kulbachinskiy; D M Esyunina
Journal:  Mol Biol       Date:  2022-08-30       Impact factor: 1.540

  9 in total

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