| Literature DB >> 31192258 |
Ye Tian1,2, Feimeng An1,2, Jiaqi Wang1,2, Chang Liu1,2, Huiqiang Wu3, Yuju Cao4, Jianzhong Wang2, Guoqiang Wang2.
Abstract
BACKGROUND: Steroid-induced osteonecrosis of the femoral head is a relatively serious condition which seriously reduces patient quality of life. However, the pathogenesis of steroid-induced ONFH is still unclear. In recent years, more scholars have found that the pathogenesis of steroid-induced ONFH is related to susceptibility factors such as MMPs/TIMPs system. The main purpose of this study is to investigate the correlation between MMP2 and MMP10 gene polymorphisms and steroid-induced ONFH in Chinese Han population.Entities:
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Year: 2019 PMID: 31192258 PMCID: PMC6525909 DOI: 10.1155/2019/8298193
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Characteristics of the individuals in controls and steroid-induced ONFH patients.
| Variables | Cases (n=286) | Controls (n=309) |
|
|---|---|---|---|
| N (%) | N (%) | ||
| Age, years | |||
| Mean ± SD | 41.83 ± 13.12 | 48.78 ± 8.30 | < 0.001a |
| ≤48 | 203 (71.0) | 170 (55.0) | |
| >48 | 83 (29.0) | 139 (45.0) | |
| Gender | 0.412b | ||
| female | 113 (39.5) | 112 (36.2) | |
| male | 173 (60.5) | 197 (63.8) | |
| Clinical stages | |||
| Stage II | 64 (22.4) | ||
| Stage III | 126 (44.1) | ||
| Stage IV | 96 (33.6) | ||
| Hip lesions | |||
| Unilateral | 83 (29.0) | ||
| Bilateral | 203 (71.0) | ||
| Course, months | |||
| >12 | 157 (45.1) | ||
| ≤12 | 129 (54.9) |
P < 0.05 indicates statistical significance.
a Independent samples t test.
b Two-sided Chi-squared test.
Basic information of candidate SNPs in this study.
| SNP | Gene | Position | Alleles | MAF |
| ORs | 95% CI |
| ||
|---|---|---|---|---|---|---|---|---|---|---|
| A/B | case | control | for HWE | |||||||
| rs243866 |
| 16q12.2 | A/G | 0.112 | 0.173 | 0.329 | 0.79 | 0.56 | 1.13 | 0.194 |
| rs243864 |
| 16q12.2 | G/T | 0.112 | 0.140 | 0.342 | 0.78 | 0.55 | 1.10 | 0.151 |
| rs865094 |
| 16q12.2 | G/A | 0.290 | 0.266 | 1.000 | 1.13 | 0.87 | 1.45 | 0.357 |
| rs11646643 |
| 16q12.2 | G/A | 0.175 | 0.205 | 0.601 | 0.83 | 0.62 | 1.11 | 0.202 |
| rs2241146 |
| 16q12.2 | A/G | 0.234 | 0.213 | 0.611 | 1.13 | 0.86 | 1.48 | 0.388 |
| rs9928731 |
| 16q12.2 | T/C | 0.486 | 0.476 | 0.170 | 1.04 | 0.83 | 1.31 | 0.719 |
| rs470154 |
| 11q22.2 | T/G | 0.149 | 0.107 | 1.000 | 1.45 | 1.03 | 2.05 | 0.032∗ |
| rs17293607 |
| 11q22.2 | G/A | 0.003 | 0.005 | 1.000 | 0.72 | 0.12 | 4.32 | 0.931 |
SNP: single nucleotide polymorphism, HWE: Hardy-Weinberg equilibrium, OR: odds ratio, 95% CI: 95% confidence interval, and MAF: minor allele frequency.
a P values were calculated by exact test.
b P values were calculated by Pearson Chi-squared test.
Genotypic model analysis of relationship between SNPs and steroid-induced ONFH.
| SNP ID | Model | Genotype | Controls | Cases | Without Adjustment | With Adjustment | ||
|---|---|---|---|---|---|---|---|---|
| OR (95% CI) |
| OR (95% CI) |
| |||||
| rs470154 | Codominant | G/G | 245 (79.5%) | 210 (73.4%) | 1 | 0.067 | 1 | 0.120 |
| G/T | 60 (19.5%) | 67 (23.4%) | 1.30 (0.88-1.93) | 1.27 (0.84-1.92) | ||||
| T/T | 3 (1%) | 9 (3.1%) | 3.50 (0.94-13.10) | 3.37 (0.83-13.67) | ||||
| Dominant | G/G | 245 (79.5%) | 210 (73.4%) | 1 | 0.078 | 1 | 0.130 | |
| G/T-T/T | 63 (20.4%) | 76 (26.6%) | 1.41 (0.96-2.06) | 1.36 (0.91-2.04) | ||||
| Recessive | G/G-G/T | 305 (99%) | 277 (96.8%) | 1 | 0.055 | 1 | 0.083 | |
| T/T | 3 (1%) | 9 (3.1%) | 3.30 (0.89-12.33) | 3.20 (0.79-12.95) | ||||
| Log-additive | - | - | - | 1.44 (1.02-2.02) | 0.035 | 1.40 (0.98-2.00) | 0.066 | |
| rs2241146 | Codominant | G/G | 188 (61.2%) | 175 (61.2%) | 1 | 0.078 | 1 | 0.058 |
| G/A | 107 (34.9%) | 88 (30.8%) | 0.88 (0.62-1.25) | 0.93 (0.65-1.34) | ||||
| A/A | 12 (3.9%) | 23 (8%) | 2.06 (0.99-4.26) | 2.36 (1.10-5.07) | ||||
| Dominant | G/G | 188 (61.2%) | 175 (61.2%) | 1 | 0.990 | 1 | 0.710 | |
| G/A-A/A | 119 (38.8%) | 111 (38.8%) | 1.00 (0.72-1.39) | 1.07 (0.75-1.51) | ||||
| Recessive | G/G-G/A | 295 (96.1%) | 263 (92%) | 1 | 0.032 | 1 | 0.018 | |
| A/A | 12 (3.9%) | 23 (8%) | 2.15 (1.05-4.41) | 2.42 (1.14-5.14) | ||||
| Log-additive | - | - | - | 1.12 (0.86-1.46) | 0.400 | 1.19 (0.90-1.58) | 0.230 | |
a P values were calculated by Wald test by unconditional logistic regression adjusted for age and gender.
∗ P < 0.05 indicates statistical significance.
Stratified analysis for association of MMP2 and MMP10 gene polymorphism with the clinical phenotypes of steroid-induced ONFH.
| SNPs | Subgroups | Genotype(n) | Allele(%) | ||||
|---|---|---|---|---|---|---|---|
| AA/AB/BB |
| OR | 95% CI |
| |||
| rs470154(T/G) | Controls | 3 / 60 / 245 | |||||
| Case-Unilateral | 4 / 15 / 64 | 0.094 | 1.34 | 0.81 | 2.23 | 0.258 | |
| Case-Bilateral | 5 / 52 / 146 | 0.250 | 1.50 | 1.04 | 2.18 | 0.031 | |
| Case-Stage II | 3 / 11 / 50 | 0.130 | 1.28 | 0.72 | 2.26 | 0.401 | |
| Case-Stage III | 5 / 34 / 87 | 0.015 | 1.76 | 1.17 | 2.67 | 0.007 | |
| Case-Stage IV | 1 / 22 / 73 | 0.820 | 1.19 | 0.72 | 1.96 | 0.492 | |
| Case > 12 months | 5 / 31 / 121 | 0.190 | 1.25 | 0.83 | 1.90 | 0.290 | |
| Case ≤ 12 months | 4 / 36 / 89 | 0.074 | 1.71 | 1.13 | 2.59 | 0.010 | |
| rs243866 (A/G) | Controls | 8 / 68 / 231 | |||||
| Case-Unilateral | 0 / 10 / 73 | 0.013 | 0.40 | 0.20 | 0.80 | 0.007 | |
| Case-Bilateral | 3 / 48 / 152 | 0.470 | 0.97 | 0.67 | 1.40 | 0.862 | |
| Case-Stage II | 1 / 10 / 53 | 0.400 | 0.65 | 0.35 | 1.23 | 0.187 | |
| Case-Stage III | 1 / 21 / 104 | 0.240 | 0.63 | 0.39 | 1.03 | 0.064 | |
| Case-Stage IV | 1 / 27 / 68 | 0.240 | 1.12 | 0.71 | 1.77 | 0.620 | |
| Case > 12 months | 2 / 32 / 123 | 0.470 | 0.82 | 0.54 | 1.24 | 0.341 | |
| Case ≤ 12 months | 1 / 26 / 102 | 0.240 | 0.77 | 0.49 | 1.21 | 0.255 | |
| rs243864 (G/T) | Controls | 8 / 70 / 230 | |||||
| Case-Unilateral | 0 / 10 / 73 | 0.010 | 0.40 | 0.20 | 0.78 | 0.006 | |
| Case-Bilateral | 3 / 48 / 152 | 0.500 | 0.95 | 0.66 | 1.36 | 0.764 | |
| Case-Stage II | 1 / 10 / 53 | 0.360 | 0.64 | 0.34 | 1.20 | 0.163 | |
| Case-Stage III | 1 / 21 / 104 | 0.200 | 0.62 | 0.38 | 1.01 | 0.051 | |
| Case-Stage IV | 1 / 27 / 68 | 0.270 | 1.10 | 0.69 | 1.73 | 0.692 | |
| Case > 12 months | 2 / 32 / 123 | 0.470 | 0.80 | 0.53 | 1.21 | 0.286 | |
| Case ≤ 12 months | 1 / 26 / 102 | 0.230 | 0.75 | 0.48 | 1.18 | 0.213 | |
| rs865094 (G/A) | Controls | 22 / 120 / 166 | |||||
| Case-Unilateral | 8 / 44 / 31 | 0.029 | 1.56 | 1.08 | 2.24 | 0.016 | |
| Case-Bilateral | 9 / 88 /106 | 0.430 | 0.97 | 0.73 | 1.29 | 0.855 | |
| Case-Stage II | 4 / 30 / 30 | 0.500 | 1.16 | 0.77 | 1.77 | 0.478 | |
| Case-Stage III | 9 / 58 / 59 | 0.780 | 1.19 | 0.86 | 1.64 | 0.290 | |
| Case-Stage IV | 4 / 92 / 48 | 0.370 | 1.02 | 0.71 | 1.47 | 0.900 | |
| Case > 12 months | 9 / 70 / 78 | 0.750 | 1.07 | 0.79 | 1.45 | 0.649 | |
| Case ≤ 12 months | 8 / 62 / 59 | 0.240 | 1.19 | 0.87 | 1.65 | 0.277 | |
| rs11646643 (G/A) | Controls | 11 / 104 / 193 | |||||
| Case-Unilateral | 1 / 18 / 64 | 0.062 | 0.53 | 0.32 | 0.88 | 0.014 | |
| Case-Bilateral | 5 / 70 /127 | 0.320 | 0.96 | 0.70 | 1.31 | 0.800 | |
| Case-Stage II | 2 / 22 / 40 | 0.640 | 0.99 | 0.62 | 1.59 | 0.971 | |
| Case-Stage III | 2 / 38 / 86 | 0.360 | 0.78 | 0.53 | 1.14 | 0.200 | |
| Case-Stage IV | 2 / 28 / 65 | 0.430 | 0.79 | 0.51 | 1.21 | 0.273 | |
| Case > 12 months | 4 / 44 / 108 | 0.370 | 0.78 | 0.54 | 1.11 | 0.166 | |
| Case ≤ 12 months | 2 / 44 / 83 | 0.320 | 0.89 | 0.61 | 1.29 | 0.532 | |
| rs2241146 (A/G) | Controls | 12 / 107 / 188 | |||||
| Case-Unilateral | 10 / 30 / 43 | 0.038 | 1.59 | 1.08 | 2.33 | 0.017 | |
| Case-Bilateral | 13 / 58 / 132 | 0.230 | 0.96 | 0.71 | 1.31 | 0.804 | |
| Case-Stage II | 6 / 14 / 44 | 0.076 | 0.94 | 0.59 | 1.51 | 0.797 | |
| Case-Stage III | 7 / 44 / 75 | 0.650 | 1.10 | 0.78 | 1.57 | 0.587 | |
| Case-Stage IV | 10 / 30 / 56 | 0.078 | 1.30 | 0.89 | 1.89 | 0.173 | |
| Case > 12 months | 17 / 51 / 89 | 0.013 | 1.37 | 1.00 | 1.88 | 0.050 | |
| Case ≤ 12 months | 6 / 37 / 86 | 0.710 | 0.86 | 0.60 | 1.25 | 0.435 | |
| rs9928731 (T/C) | Controls | 63 / 166 / 78 | |||||
| Case-Unilateral | 17 / 43 / 23 | 0.970 | 0.95 | 0.68 | 1.35 | 0.789 | |
| Case-Bilateral | 47 / 107 / 49 | 0.860 | 1.08 | 0.84 | 1.39 | 0.542 | |
| Case-Stage II | 15 / 29 / 20 | 0.550 | 0.94 | 0.64 | 1.38 | 0.763 | |
| Case-Stage III | 28 / 72 / 26 | 0.600 | 1.14 | 0.85 | 1.53 | 0.387 | |
| Case-Stage IV | 21 / 49 / 26 | 0.980 | 0.99 | 0.72 | 1.37 | 0.969 | |
| Case > 12 months | 27 / 88 / 42 | 0.670 | 0.91 | 0.69 | 1.20 | 0.500 | |
| Case ≤ 12 months | 37 / 62 / 30 | 0.270 | 1.23 | 0.92 | 1.64 | 0.164 | |
∗P<0.05 indicates statistical significance.
a P values were calculated by Wald test adjusted for age and gender.
b P values were calculated by Pearson Chi-squared test.
A power analysis of selected SNPs for MMP2 and MMP10 in case-control studies.
| SNP_ID | Case n1 | Control n2 | Case A | Control A | Case | Control |
| z | power |
|---|---|---|---|---|---|---|---|---|---|
| rs243866 | 572 | 614 | 64 | 84 | 0.112 | 0.137 | 0.125 | -0.665 | 0.253 |
| rs243864 | 572 | 616 | 64 | 86 | 0.112 | 0.140 | 0.126 | -0.525 | 0.300 |
| rs865094 | 572 | 616 | 166 | 164 | 0.290 | 0.266 | 0.278 | -1.037 | 0.150 |
| rs11646643 | 570 | 616 | 100 | 126 | 0.175 | 0.205 | 0.191 | -0.687 | 0.246 |
| rs2241146 | 572 | 614 | 134 | 131 | 0.234 | 0.213 | 0.223 | -1.095 | 0.137 |
| rs9928731 | 572 | 614 | 278 | 292 | 0.486 | 0.476 | 0.481 | -1.600 | 0.055 |
| rs470154 | 572 | 616 | 85 | 66 | 0.149 | 0.107 | 0.127 | 0.183 | 0.573 |
| rs17293607 | 572 | 618 | 2 | 3 | 0.003 | 0.005 | 0.004 | -1.608 | 0.054 |
p<0.05 indicates statistical significance.
Figure 1Linkage disequilibrium (LD) plots containing six SNPs from MMP2. Red squares display statistically significant associations between a pair of SNPs, as measured by D'; darker shades of red indicate higher D'.
The haplotype frequencies of MMP2 polymorphisms and their association with steroid-induced ONFH risk.
| Haplotype | Freq | ORa(95% CI) |
| ||
|---|---|---|---|---|---|
| rs11646643 | rs2241146 | rs9928731 | |||
| A | G | T | 0.481 | 1 | - |
| A | A | C | 0.220 | 1.13 (0.84 - 1.54) | 0.420 |
| G | G | C | 0.188 | 0.84 (0.60 - 1.19) | 0.330 |
| A | G | C | 0.108 | 0.86 (0.57 - 1.29) | 0.470 |
p < 0.05 indicates statistical significance.
a= adjusted by gender and age.
The haplotype frequencies of MMP2 polymorphisms and their association with steroid-induced ONFH risk.
| Haplotype | Freq | ORa(95% CI) |
| |
|---|---|---|---|---|
| rs243866 | rs243864 | |||
| G | T | 0.874 | 1 | - |
| A | G | 0.125 | 0.77 (0.53 - 1.10) | 0.150 |
p < 0.05 indicates statistical significance.
a= adjusted by gender and age.