Literature DB >> 31179687

Extraction of Plant DNA by Microneedle Patch for Rapid Detection of Plant Diseases.

Rajesh Paul, Amanda C Saville, Jeana C Hansel, Yanqi Ye1, Carmin Ball, Alyssa Williams, Xinyuan Chang2, Guojun Chen1, Zhen Gu1, Jean B Ristaino, Qingshan Wei.   

Abstract

In-field molecular diagnosis of plant diseases via nucleic acid amplification is currently limited by cumbersome protocols for extracting and isolating pathogenic DNA from plant tissues. To address this challenge, a rapid plant DNA extraction method was developed using a disposable polymeric microneedle (MN) patch. By applying MN patches on plant leaves, amplification-assay-ready DNA can be extracted within a minute from different plant species. MN-extracted DNA was used for direct polymerase chain reaction amplification of plant plastid DNA without purification. Furthermore, using this patch device, extraction of plant pathogen DNA ( Phytophthora infestans) from both laboratory-inoculated and field-infected leaf samples was performed for detection of late blight disease in tomato. MN extraction achieved 100% detection rate of late blight infections for samples after 3 days of inoculation when compared to the conventional gold standard cetyltrimethylammonium bromide (CTAB)-based DNA extraction method and 100% detection rate for all blind field samples tested. This simple, cell-lysis-free, and purification-free DNA extraction method could be a transformative approach to facilitate rapid sample preparation for molecular diagnosis of various plant diseases directly in the field.

Entities:  

Keywords:  DNA extraction; microneedle patch; nucleic acid amplification; plant disease; point-of-care diagnostics

Mesh:

Substances:

Year:  2019        PMID: 31179687     DOI: 10.1021/acsnano.9b00193

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  10 in total

1.  The persistent threat of emerging plant disease pandemics to global food security.

Authors:  Jean B Ristaino; Pamela K Anderson; Daniel P Bebber; Kate A Brauman; Nik J Cunniffe; Nina V Fedoroff; Cambria Finegold; Karen A Garrett; Christopher A Gilligan; Christopher M Jones; Michael D Martin; Graham K MacDonald; Patricia Neenan; Angela Records; David G Schmale; Laura Tateosian; Qingshan Wei
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

2.  Biodegradable β-Cyclodextrin Conjugated Gelatin Methacryloyl Microneedle for Delivery of Water-Insoluble Drug.

Authors:  Xingwu Zhou; Zhimin Luo; Avijit Baidya; Han-Jun Kim; Canran Wang; Xing Jiang; Moyuan Qu; Jixiang Zhu; Li Ren; Fereshteh Vajhadin; Peyton Tebon; Niyuan Zhang; Yumeng Xue; Yudi Feng; Chengbin Xue; Yi Chen; KangJu Lee; Junmin Lee; Shiming Zhang; Chun Xu; Nureddin Ashammakhi; Samad Ahadian; Mehmet Remzi Dokmeci; Zhen Gu; Wujin Sun; Ali Khademhosseini
Journal:  Adv Healthc Mater       Date:  2020-05-04       Impact factor: 9.933

3.  Gelatin Methacryloyl Microneedle Patches for Minimally Invasive Extraction of Skin Interstitial Fluid.

Authors:  Jixiang Zhu; Xingwu Zhou; Han-Jun Kim; Moyuan Qu; Xing Jiang; KangJu Lee; Li Ren; Qingzhi Wu; Canran Wang; Xunmin Zhu; Peyton Tebon; Shiming Zhang; Junmin Lee; Nureddin Ashammakhi; Samad Ahadian; Mehmet Remzi Dokmeci; Zhen Gu; Wujin Sun; Ali Khademhosseini
Journal:  Small       Date:  2020-02-26       Impact factor: 13.281

Review 4.  Microneedles for transdermal diagnostics: Recent advances and new horizons.

Authors:  Gui-Shi Liu; Yifei Kong; Yensheng Wang; Yunhan Luo; Xudong Fan; Xi Xie; Bo-Ru Yang; Mei X Wu
Journal:  Biomaterials       Date:  2019-12-26       Impact factor: 12.479

5.  Fabrication of High-Density Out-of-Plane Microneedle Arrays with Various Heights and Diverse Cross-Sectional Shapes.

Authors:  Hyeonhee Roh; Young Jun Yoon; Jin Soo Park; Dong-Hyun Kang; Seung Min Kwak; Byung Chul Lee; Maesoon Im
Journal:  Nanomicro Lett       Date:  2021-12-09

Review 6.  Agricultural nanodiagnostics for plant diseases: recent advances and challenges.

Authors:  Zheng Li; Tao Yu; Rajesh Paul; Jingyuan Fan; Yuming Yang; Qingshan Wei
Journal:  Nanoscale Adv       Date:  2020-07-06

7.  Ultrafast and absolute quantification of SARS-CoV-2 on food using hydrogel RT-LAMP without pre-lysis.

Authors:  Tao Yang; Dong Li; Yuhua Yan; Fatima-Ezzahra Ettoumi; Ricardo A Wu; Zisheng Luo; Hanry Yu; Xingyu Lin
Journal:  J Hazard Mater       Date:  2022-09-24       Impact factor: 14.224

Review 8.  Molecular Approaches for Low-Cost Point-of-Care Pathogen Detection in Agriculture and Forestry.

Authors:  Paolo Baldi; Nicola La Porta
Journal:  Front Plant Sci       Date:  2020-10-28       Impact factor: 5.753

9.  Reducing False Negatives in COVID-19 Testing by Using Microneedle-Based Oropharyngeal Swabs.

Authors:  Wei Chen; Bo Cai; Zhi Geng; Fenghua Chen; Zheng Wang; Lin Wang; Xiaoyuan Chen
Journal:  Matter       Date:  2020-10-05

Review 10.  Smart Microneedles for Therapy and Diagnosis.

Authors:  Xiaoxuan Zhang; Yuetong Wang; Junjie Chi; Yuanjin Zhao
Journal:  Research (Wash D C)       Date:  2020-12-18
  10 in total

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