Literature DB >> 31171865

Genetic correlations of polygenic disease traits: from theory to practice.

Wouter van Rheenen1, Wouter J Peyrot2, Andrew J Schork3, S Hong Lee4, Naomi R Wray5,6.   

Abstract

The genetic correlation describes the genetic relationship between two traits and can contribute to a better understanding of the shared biological pathways and/or the causality relationships between them. The rarity of large family cohorts with recorded instances of two traits, particularly disease traits, has made it difficult to estimate genetic correlations using traditional epidemiological approaches. However, advances in genomic methodologies, such as genome-wide association studies, and widespread sharing of data now allow genetic correlations to be estimated for virtually any trait pair. Here, we review the definition, estimation, interpretation and uses of genetic correlations, with a focus on applications to human disease.

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Year:  2019        PMID: 31171865     DOI: 10.1038/s41576-019-0137-z

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  104 in total

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Review 3.  The pleiotropic structure of the genotype-phenotype map: the evolvability of complex organisms.

Authors:  Günter P Wagner; Jianzhi Zhang
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Review 4.  Nordic registry-based cohort studies: Possibilities and pitfalls when combining Nordic registry data.

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5.  The many faces of pleiotropy.

Authors:  Annalise B Paaby; Matthew V Rockman
Journal:  Trends Genet       Date:  2012-11-07       Impact factor: 11.639

6.  Meta-analysis of the heritability of human traits based on fifty years of twin studies.

Authors:  Tinca J C Polderman; Beben Benyamin; Christiaan A de Leeuw; Patrick F Sullivan; Arjen van Bochoven; Peter M Visscher; Danielle Posthuma
Journal:  Nat Genet       Date:  2015-05-18       Impact factor: 38.330

7.  Common genetic determinants of schizophrenia and bipolar disorder in Swedish families: a population-based study.

Authors:  Paul Lichtenstein; Benjamin H Yip; Camilla Björk; Yudi Pawitan; Tyrone D Cannon; Patrick F Sullivan; Christina M Hultman
Journal:  Lancet       Date:  2009-01-17       Impact factor: 79.321

8.  Detection of widespread horizontal pleiotropy in causal relationships inferred from Mendelian randomization between complex traits and diseases.

Authors:  Marie Verbanck; Chia-Yen Chen; Benjamin Neale; Ron Do
Journal:  Nat Genet       Date:  2018-04-23       Impact factor: 38.330

9.  Local Genetic Correlation Gives Insights into the Shared Genetic Architecture of Complex Traits.

Authors:  Huwenbo Shi; Nicholas Mancuso; Sarah Spendlove; Bogdan Pasaniuc
Journal:  Am J Hum Genet       Date:  2017-11-02       Impact factor: 11.025

10.  Causal associations between risk factors and common diseases inferred from GWAS summary data.

Authors:  Zhihong Zhu; Zhili Zheng; Futao Zhang; Yang Wu; Maciej Trzaskowski; Robert Maier; Matthew R Robinson; John J McGrath; Peter M Visscher; Naomi R Wray; Jian Yang
Journal:  Nat Commun       Date:  2018-01-15       Impact factor: 14.919

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  62 in total

Review 1.  Polygenic Scores to Assess Atherosclerotic Cardiovascular Disease Risk: Clinical Perspectives and Basic Implications.

Authors:  Krishna G Aragam; Pradeep Natarajan
Journal:  Circ Res       Date:  2020-04-23       Impact factor: 17.367

Review 2.  Correlational selection in the age of genomics.

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Journal:  Nat Ecol Evol       Date:  2021-04-15       Impact factor: 15.460

Review 3.  The genetics of human ageing.

Authors:  David Melzer; Luke C Pilling; Luigi Ferrucci
Journal:  Nat Rev Genet       Date:  2019-11-05       Impact factor: 53.242

4.  Evaluating marginal genetic correlation of associated loci for complex diseases and traits between European and East Asian populations.

Authors:  Haojie Lu; Ting Wang; Jinhui Zhang; Shuo Zhang; Shuiping Huang; Ping Zeng
Journal:  Hum Genet       Date:  2021-06-06       Impact factor: 4.132

5.  Genome-Wide Association Studies of CKD and Related Traits.

Authors:  Adrienne Tin; Anna Köttgen
Journal:  Clin J Am Soc Nephrol       Date:  2020-05-14       Impact factor: 8.237

6.  Integrative functional linear model for genome-wide association studies with multiple traits.

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Journal:  Biostatistics       Date:  2022-04-13       Impact factor: 5.899

7.  Cytosine and adenosine base editing in human pluripotent stem cells using transient reporters for editing enrichment.

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8.  Psychological trauma and the genetic overlap between posttraumatic stress disorder and major depressive disorder.

Authors:  Jessica Mundy; Christopher Hübel; Joel Gelernter; Daniel Levey; Robin M Murray; Megan Skelton; Murray B Stein; Evangelos Vassos; Gerome Breen; Jonathan R I Coleman
Journal:  Psychol Med       Date:  2021-06-04       Impact factor: 7.723

9.  A unified framework for cross-population trait prediction by leveraging the genetic correlation of polygenic traits.

Authors:  Mingxuan Cai; Jiashun Xiao; Shunkang Zhang; Xiang Wan; Hongyu Zhao; Gang Chen; Can Yang
Journal:  Am J Hum Genet       Date:  2021-03-25       Impact factor: 11.025

10.  Novel ultra-rare exonic variants identified in a founder population implicate cadherins in schizophrenia.

Authors:  Todd Lencz; Jin Yu; Raiyan Rashid Khan; Erin Flaherty; Shai Carmi; Max Lam; Danny Ben-Avraham; Nir Barzilai; Susan Bressman; Ariel Darvasi; Judy H Cho; Lorraine N Clark; Zeynep H Gümüş; Joseph Vijai; Robert J Klein; Steven Lipkin; Kenneth Offit; Harry Ostrer; Laurie J Ozelius; Inga Peter; Anil K Malhotra; Tom Maniatis; Gil Atzmon; Itsik Pe'er
Journal:  Neuron       Date:  2021-03-22       Impact factor: 17.173

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