Literature DB >> 31140509

Natural products targeting strategies involving molecular networking: different manners, one goal.

Alexander E Fox Ramos1, Laurent Evanno1, Erwan Poupon1, Pierre Champy1, Mehdi A Beniddir1.   

Abstract

Covering: up to 2019Landmark advances in bioinformatics tools have recently enhanced the field of natural products research, putting today's natural product chemists in the enviable position of being able to perform the efficient targeting/discovery of previously undescribed molecules by expediting the prioritization of the isolation workflow. Among these advances, MS/MS molecular networking has appeared as a promising approach to dereplicate complex natural product mixtures, leading to a real revolution in the "art of natural product isolation" by accelerating the pace of research of this field. This review illustrates through selected cornerstone studies the new thinking in natural product isolation by drawing a parallel between the different underlying philosophies behind the use of molecular networking in targeting natural products.

Mesh:

Substances:

Year:  2019        PMID: 31140509     DOI: 10.1039/c9np00006b

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  38 in total

Review 1.  Metabolomics and genomics in natural products research: complementary tools for targeting new chemical entities.

Authors:  Lindsay K Caesar; Rana Montaser; Nancy P Keller; Neil L Kelleher
Journal:  Nat Prod Rep       Date:  2021-11-17       Impact factor: 13.423

Review 2.  Advancements in capturing and mining mass spectrometry data are transforming natural products research.

Authors:  Scott A Jarmusch; Justin J J van der Hooft; Pieter C Dorrestein; Alan K Jarmusch
Journal:  Nat Prod Rep       Date:  2021-11-17       Impact factor: 13.423

3.  Metabolomics with multi-block modelling of mass spectrometry and nuclear magnetic resonance in order to discriminate Haplosclerida marine sponges.

Authors:  Mehdi A Beniddir; Laurence Le Moyec; Mohamed N Triba; Arlette Longeon; Alexandre Deville; Alain Blond; Van Cuong Pham; Nicole J de Voogd; Marie-Lise Bourguet-Kondracki
Journal:  Anal Bioanal Chem       Date:  2022-06-20       Impact factor: 4.478

4.  Mass Spectral Molecular Networking to Profile the Metabolome of Biostimulant Bacillus Strains.

Authors:  Lerato Nephali; Paul Steenkamp; Karl Burgess; Johan Huyser; Margaretha Brand; Justin J J van der Hooft; Fidele Tugizimana
Journal:  Front Plant Sci       Date:  2022-06-09       Impact factor: 6.627

5.  Chemically informed analyses of metabolomics mass spectrometry data with Qemistree.

Authors:  Anupriya Tripathi; Yoshiki Vázquez-Baeza; Julia M Gauglitz; Mingxun Wang; Kai Dührkop; Mélissa Nothias-Esposito; Deepa D Acharya; Madeleine Ernst; Justin J J van der Hooft; Qiyun Zhu; Daniel McDonald; Asker D Brejnrod; Antonio Gonzalez; Jo Handelsman; Markus Fleischauer; Marcus Ludwig; Sebastian Böcker; Louis-Félix Nothias; Rob Knight; Pieter C Dorrestein
Journal:  Nat Chem Biol       Date:  2020-11-16       Impact factor: 15.040

Review 6.  Ethnobotany and the Role of Plant Natural Products in Antibiotic Drug Discovery.

Authors:  Gina Porras; François Chassagne; James T Lyles; Lewis Marquez; Micah Dettweiler; Akram M Salam; Tharanga Samarakoon; Sarah Shabih; Darya Raschid Farrokhi; Cassandra L Quave
Journal:  Chem Rev       Date:  2020-11-09       Impact factor: 60.622

Review 7.  Recent Advances in Discovery of Lead Structures from Microbial Natural Products: Genomics- and Metabolomics-Guided Acceleration.

Authors:  Linda Sukmarini
Journal:  Molecules       Date:  2021-04-27       Impact factor: 4.411

8.  Navigating through chemical space and evolutionary time across the Australian continent in plant genus Eremophila.

Authors:  Oliver Gericke; Rachael M Fowler; Allison M Heskes; Michael J Bayly; Susan J Semple; Chi P Ndi; Dan Staerk; Claus J Løland; Daniel J Murphy; Bevan J Buirchell; Birger Lindberg Møller
Journal:  Plant J       Date:  2021-09-16       Impact factor: 7.091

9.  Reproducible molecular networking of untargeted mass spectrometry data using GNPS.

Authors:  Allegra T Aron; Emily C Gentry; Kerry L McPhail; Louis-Félix Nothias; Mélissa Nothias-Esposito; Amina Bouslimani; Daniel Petras; Julia M Gauglitz; Nicole Sikora; Fernando Vargas; Justin J J van der Hooft; Madeleine Ernst; Kyo Bin Kang; Christine M Aceves; Andrés Mauricio Caraballo-Rodríguez; Irina Koester; Kelly C Weldon; Samuel Bertrand; Catherine Roullier; Kunyang Sun; Richard M Tehan; Cristopher A Boya P; Martin H Christian; Marcelino Gutiérrez; Aldo Moreno Ulloa; Javier Andres Tejeda Mora; Randy Mojica-Flores; Johant Lakey-Beitia; Victor Vásquez-Chaves; Yilue Zhang; Angela I Calderón; Nicole Tayler; Robert A Keyzers; Fidele Tugizimana; Nombuso Ndlovu; Alexander A Aksenov; Alan K Jarmusch; Robin Schmid; Andrew W Truman; Nuno Bandeira; Mingxun Wang; Pieter C Dorrestein
Journal:  Nat Protoc       Date:  2020-05-13       Impact factor: 17.021

10.  Assessing the Diversity and Biomedical Potential of Microbes Associated With the Neptune's Cup Sponge, Cliona patera.

Authors:  Xin Yi Ho; Nursheena Parveen Katermeran; Lindsey Kane Deignan; Ma Yadanar Phyo; Ji Fa Marshall Ong; Jun Xian Goh; Juat Ying Ng; Karenne Tun; Lik Tong Tan
Journal:  Front Microbiol       Date:  2021-06-29       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.