Literature DB >> 31117362

Driving the Scalability of DNA-Based Information Storage Systems.

Kyle J Tomek1, Kevin Volkel2, Alexander Simpson2, Austin G Hass1,3, Elaine W Indermaur1, James M Tuck2, Albert J Keung1.   

Abstract

The extreme density of DNA presents a compelling advantage over current storage media; however, to reach practical capacities, new systems for organizing and accessing information are needed. Here, we use chemical handles to selectively extract unique files from a complex database of DNA mimicking 5 TB of data and design and implement a nested file address system that increases the theoretical maximum capacity of DNA storage systems by five orders of magnitude. These advancements enable the development and future scaling of DNA-based data storage systems with modern capacities and file access capabilities.

Keywords:  DNA sequencing; DNA storage; file access; information storage; nested architecture; synthetic biology

Mesh:

Substances:

Year:  2019        PMID: 31117362     DOI: 10.1021/acssynbio.9b00100

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  10 in total

Review 1.  Design considerations for advancing data storage with synthetic DNA for long-term archiving.

Authors:  Chisom Ezekannagha; Anke Becker; Dominik Heider; Georges Hattab
Journal:  Mater Today Bio       Date:  2022-05-27

2.  Random access DNA memory using Boolean search in an archival file storage system.

Authors:  James L Banal; Tyson R Shepherd; Joseph Berleant; Hellen Huang; Miguel Reyes; Cheri M Ackerman; Paul C Blainey; Mark Bathe
Journal:  Nat Mater       Date:  2021-06-10       Impact factor: 43.841

Review 3.  Uncertainties in synthetic DNA-based data storage.

Authors:  Chengtao Xu; Chao Zhao; Biao Ma; Hong Liu
Journal:  Nucleic Acids Res       Date:  2021-06-04       Impact factor: 16.971

Review 4.  DNA stability: a central design consideration for DNA data storage systems.

Authors:  Karishma Matange; James M Tuck; Albert J Keung
Journal:  Nat Commun       Date:  2021-03-01       Impact factor: 14.919

5.  Long term conservation of DNA at ambient temperature. Implications for DNA data storage.

Authors:  Delphine Coudy; Marthe Colotte; Aurélie Luis; Sophie Tuffet; Jacques Bonnet
Journal:  PLoS One       Date:  2021-11-11       Impact factor: 3.240

6.  Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage.

Authors:  Chengtao Xu; Biao Ma; Zhongli Gao; Xing Dong; Chao Zhao; Hong Liu
Journal:  Sci Adv       Date:  2021-11-12       Impact factor: 14.136

7.  Scaling DNA data storage with nanoscale electrode wells.

Authors:  Bichlien H Nguyen; Christopher N Takahashi; Gagan Gupta; Jake A Smith; Richard Rouse; Paul Berndt; Sergey Yekhanin; David P Ward; Siena D Ang; Patrick Garvan; Hsing-Yeh Parker; Rob Carlson; Douglas Carmean; Luis Ceze; Karin Strauss
Journal:  Sci Adv       Date:  2021-11-24       Impact factor: 14.136

8.  Hidden Addressing Encoding for DNA Storage.

Authors:  Penghao Wang; Ziniu Mu; Lijun Sun; Shuqing Si; Bin Wang
Journal:  Front Bioeng Biotechnol       Date:  2022-07-19

9.  Promiscuous molecules for smarter file operations in DNA-based data storage.

Authors:  Kyle J Tomek; Kevin Volkel; Elaine W Indermaur; James M Tuck; Albert J Keung
Journal:  Nat Commun       Date:  2021-06-10       Impact factor: 14.919

Review 10.  Decoding DNA data storage for investment.

Authors:  Philip M Stanley; Lisa M Strittmatter; Alice M Vickers; Kevin C K Lee
Journal:  Biotechnol Adv       Date:  2020-09-28       Impact factor: 14.227

  10 in total

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