Literature DB >> 31116423

The current state of molecular testing in the treatment of patients with solid tumors, 2019.

Wafik S El-Deiry1, Richard M Goldberg2, Heinz-Josef Lenz3, Anthony F Shields4, Geoffrey T Gibney5, Antoinette R Tan6, Jubilee Brown7, Burton Eisenberg8,9, Elisabeth I Heath10, Surasak Phuphanich11, Edward Kim12, Andrew J Brenner13, John L Marshall14.   

Abstract

The world of molecular profiling has undergone revolutionary changes over the last few years as knowledge, technology, and even standard clinical practice have evolved. Broad molecular profiling is now nearly essential for all patients with metastatic solid tumors. New agents have been approved based on molecular testing instead of tumor site of origin. Molecular profiling methodologies have likewise changed such that tests that were performed on patients a few years ago are no longer complete and possibly inaccurate today. As with all rapid change, medical providers can quickly fall behind or struggle to find up-to-date sources to ensure he or she provides optimum care. In this review, the authors provide the current state of the art for molecular profiling/precision medicine, practice standards, and a view into the future ahead.
© 2019 The Authors. CA A Cancer Journal for Clinicians published by Wiley Periodicals, Inc. on behalf of American Cancer Society.

Entities:  

Keywords:  biomarkers; cancer; drug target; gene expression profiling; molecular profiling; molecular-targeted therapy; mutation; precision medicine; sequence analysis

Mesh:

Substances:

Year:  2019        PMID: 31116423      PMCID: PMC6767457          DOI: 10.3322/caac.21560

Source DB:  PubMed          Journal:  CA Cancer J Clin        ISSN: 0007-9235            Impact factor:   508.702


  156 in total

1.  Circulating DNA Demonstrates Convergent Evolution and Common Resistance Mechanisms during Treatment of Colorectal Cancer.

Authors:  Alain R Thierry; Brice Pastor; Zhi-Qin Jiang; Anastasia D Katsiampoura; Christine Parseghian; Jonathan M Loree; Michael J Overman; Cynthia Sanchez; Safia El Messaoudi; Marc Ychou; Scott Kopetz
Journal:  Clin Cancer Res       Date:  2017-04-11       Impact factor: 12.531

2.  Report of a committee convened to discuss the evaluation and staging of patients with Hodgkin's disease: Cotswolds meeting.

Authors:  T A Lister; D Crowther; S B Sutcliffe; E Glatstein; G P Canellos; R C Young; S A Rosenberg; C A Coltman; M Tubiana
Journal:  J Clin Oncol       Date:  1989-11       Impact factor: 44.544

3.  Germline Mutations in ATM and BRCA1/2 Distinguish Risk for Lethal and Indolent Prostate Cancer and are Associated with Early Age at Death.

Authors:  Rong Na; S Lilly Zheng; Misop Han; Hongjie Yu; Deke Jiang; Sameep Shah; Charles M Ewing; Liti Zhang; Kristian Novakovic; Jacqueline Petkewicz; Kamalakar Gulukota; Donald L Helseth; Margo Quinn; Elizabeth Humphries; Kathleen E Wiley; Sarah D Isaacs; Yishuo Wu; Xu Liu; Ning Zhang; Chi-Hsiung Wang; Janardan Khandekar; Peter J Hulick; Daniel H Shevrin; Kathleen A Cooney; Zhoujun Shen; Alan W Partin; H Ballentine Carter; Michael A Carducci; Mario A Eisenberger; Sam R Denmeade; Michael McGuire; Patrick C Walsh; Brian T Helfand; Charles B Brendler; Qiang Ding; Jianfeng Xu; William B Isaacs
Journal:  Eur Urol       Date:  2016-12-15       Impact factor: 20.096

4.  Genetic basis for clinical response to CTLA-4 blockade in melanoma.

Authors:  Alexandra Snyder; Vladimir Makarov; Taha Merghoub; Jianda Yuan; Jedd D Wolchok; Timothy A Chan; Jesse M Zaretsky; Alexis Desrichard; Logan A Walsh; Michael A Postow; Phillip Wong; Teresa S Ho; Travis J Hollmann; Cameron Bruggeman; Kasthuri Kannan; Yanyun Li; Ceyhan Elipenahli; Cailian Liu; Christopher T Harbison; Lisu Wang; Antoni Ribas
Journal:  N Engl J Med       Date:  2014-11-19       Impact factor: 91.245

5.  Germline DNA-repair Gene Mutations and Outcomes in Men with Metastatic Castration-resistant Prostate Cancer Receiving First-line Abiraterone and Enzalutamide.

Authors:  Emmanuel S Antonarakis; Changxue Lu; Brandon Luber; Chao Liang; Hao Wang; Yan Chen; John L Silberstein; Danilo Piana; Zhao Lai; Yidong Chen; William B Isaacs; Jun Luo
Journal:  Eur Urol       Date:  2018-02-10       Impact factor: 20.096

6.  Non-p.V600E BRAF Mutations Are Common Using a More Sensitive and Broad Detection Tool.

Authors:  Jamal Carter; Li-Hui Tseng; Gang Zheng; Jonathan Dudley; Peter Illei; Christopher D Gocke; James R Eshleman; Ming-Tseh Lin
Journal:  Am J Clin Pathol       Date:  2015-10       Impact factor: 2.493

7.  KIT gene mutations and copy number in melanoma subtypes.

Authors:  Carol Beadling; Erick Jacobson-Dunlop; F Stephen Hodi; Claudia Le; Andrea Warrick; Janice Patterson; Ajia Town; Amy Harlow; Frank Cruz; Sharl Azar; Brian P Rubin; Susan Muller; Rob West; Michael C Heinrich; Christopher L Corless
Journal:  Clin Cancer Res       Date:  2008-11-01       Impact factor: 12.531

Review 8.  Paradoxical oncogenesis--the long-term effects of BRAF inhibition in melanoma.

Authors:  Geoffrey T Gibney; Jane L Messina; Inna V Fedorenko; Vernon K Sondak; Keiran S M Smalley
Journal:  Nat Rev Clin Oncol       Date:  2013-05-28       Impact factor: 66.675

9.  Assuring the quality of next-generation sequencing in clinical laboratory practice.

Authors:  Amy S Gargis; Lisa Kalman; Meredith W Berry; David P Bick; David P Dimmock; Tina Hambuch; Fei Lu; Elaine Lyon; Karl V Voelkerding; Barbara A Zehnbauer; Richa Agarwala; Sarah F Bennett; Bin Chen; Ephrem L H Chin; John G Compton; Soma Das; Daniel H Farkas; Matthew J Ferber; Birgit H Funke; Manohar R Furtado; Lilia M Ganova-Raeva; Ute Geigenmüller; Sandra J Gunselman; Madhuri R Hegde; Philip L F Johnson; Andrew Kasarskis; Shashikant Kulkarni; Thomas Lenk; C S Jonathan Liu; Megan Manion; Teri A Manolio; Elaine R Mardis; Jason D Merker; Mangalathu S Rajeevan; Martin G Reese; Heidi L Rehm; Birgitte B Simen; Joanne M Yeakley; Justin M Zook; Ira M Lubin
Journal:  Nat Biotechnol       Date:  2012-11       Impact factor: 54.908

Review 10.  Genomic scars as biomarkers of homologous recombination deficiency and drug response in breast and ovarian cancers.

Authors:  Johnathan A Watkins; Sheeba Irshad; Anita Grigoriadis; Andrew N J Tutt
Journal:  Breast Cancer Res       Date:  2014-06-03       Impact factor: 6.466

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  63 in total

1.  Oral Cancer: Integration of Studies for Diagnostic and Therapeutic Precision.

Authors:  N J D'Silva; J S Gutkind
Journal:  Adv Dent Res       Date:  2019-11

Review 2.  Biomarker-targeted therapies for advanced-stage gastric and gastro-oesophageal junction cancers: an emerging paradigm.

Authors:  Yoshiaki Nakamura; Akihito Kawazoe; Florian Lordick; Yelena Y Janjigian; Kohei Shitara
Journal:  Nat Rev Clin Oncol       Date:  2021-03-31       Impact factor: 66.675

3.  mRNA expression in low grade serous ovarian cancer: Results of a nanoString assay in a diverse population.

Authors:  Scott E Jordan; Heba Saad; Alex Sanchez Covarrubias; John Siemon; J Matt Pearson; Brian M Slomovitz; Marilyn Huang; Andre Pinto; Matthew Schlumbrecht; Sophia Hl George
Journal:  Gynecol Oncol       Date:  2020-09-18       Impact factor: 5.482

4.  Mutation Yield of a Custom 212-Gene Next-Generation Sequencing Panel for Solid Tumors: Clinical Experience of the First 260 Cases Tested Using the JAX ActionSeq™ Assay.

Authors:  Pavalan Selvam; Meng-Chang Hsiao; Gregory Omerza; Daniel Bergeron; Shannon Rowe; Jasmina Uvalic; Melissa Soucy; Michael Peracchio; Shelbi Burns; Bridgette Meyers; Matthew Prego; Qian Nie; Guruprasad Ananda; Harshpreet Chandok; Kevin Kelly; Andrew Hesse; Honey V Reddi
Journal:  Mol Diagn Ther       Date:  2020-02       Impact factor: 4.074

5.  Global Precision Oncology: A Call to Action on Expanding Access to Targeted Cancer Therapies.

Authors:  Maheetha Bharadwaj; Mounica Vallurupalli; Franklin W Huang
Journal:  Oncologist       Date:  2021-03-05

6.  TRK Fusion Cancer: Patient Characteristics and Survival Analysis in the Real-World Setting.

Authors:  Lyudmila Bazhenova; Andrew Lokker; Jeremy Snider; Emily Castellanos; Virginia Fisher; Marc Fellous; Shivani Nanda; Jihong Zong; Karen Keating; Xiaolong Jiao
Journal:  Target Oncol       Date:  2021-04-24       Impact factor: 4.493

Review 7.  Entrectinib: A Review in NTRK+ Solid Tumours and ROS1+ NSCLC.

Authors:  James E Frampton
Journal:  Drugs       Date:  2021-04-19       Impact factor: 9.546

8.  Development of endometrial cancer after long-term usage of the levonorgestrel-releasing intrauterine system.

Authors:  Alexander Steshenko; Leila Hanna; Damian Collins
Journal:  BMJ Case Rep       Date:  2021-05-13

9.  Comprehensive Genomic Profiling of Gastroenteropancreatic Neuroendocrine Neoplasms (GEP-NENs).

Authors:  Alberto Puccini; Kelsey Poorman; Mohamed E Salem; Davide Soldato; Andreas Seeber; Richard M Goldberg; Anthony F Shields; Joanne Xiu; Francesca Battaglin; Martin D Berger; Ryuma Tokunaga; Madiha Naseem; Afsaneh Barzi; Syma Iqbal; Wu Zhang; Shivani Soni; Jimmy J Hwang; Philip A Philip; Stefania Sciallero; W Michael Korn; John L Marshall; Heinz-Josef Lenz
Journal:  Clin Cancer Res       Date:  2020-09-03       Impact factor: 12.531

Review 10.  Defining the Criteria for Reflex Testing for BRAF Mutations in Cutaneous Melanoma Patients.

Authors:  Sarah Zhou; Daniel Sikorski; Honghao Xu; Andrei Zubarev; May Chergui; François Lagacé; Wilson H Miller; Margaret Redpath; Stephanie Ghazal; Marcus O Butler; Teresa M Petrella; Joël Claveau; Carolyn Nessim; Thomas G Salopek; Robert Gniadecki; Ivan V Litvinov
Journal:  Cancers (Basel)       Date:  2021-05-10       Impact factor: 6.639

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