Literature DB >> 31065445

Active contour method for ILM segmentation in ONH volume scans in retinal OCT.

Kay Gawlik1,2, Frank Hausser1, Friedemann Paul2,3, Alexander U Brandt2,4, Ella Maria Kadas2.   

Abstract

The optic nerve head (ONH) is affected by many neurodegenerative and autoimmune inflammatory conditions. Optical coherence tomography can acquire high-resolution 3D ONH scans. However, the ONH's complex anatomy and pathology make image segmentation challenging. This paper proposes a robust approach to segment the inner limiting membrane (ILM) in ONH volume scans based on an active contour method of Chan-Vese type, which can work in challenging topological structures. A local intensity fitting energy is added in order to handle very inhomogeneous image intensities. A suitable boundary potential is introduced to avoid structures belonging to outer retinal layers being detected as part of the segmentation. The average intensities in the inner and outer region are then rescaled locally to account for different brightness values occurring among the ONH center. The appropriate values for the parameters used in the complex computational model are found using an optimization based on the differential evolution algorithm. The evaluation of results showed that the proposed framework significantly improved segmentation results compared to the commercial solution.

Entities:  

Keywords:  (000.4430) Numerical approximation and analysis; (100.0100) Image processing; (100.2960) Image analysis; (110.4500) Optical coherence tomography

Year:  2018        PMID: 31065445      PMCID: PMC6491014          DOI: 10.1364/BOE.9.006497

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  43 in total

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Authors:  Zhihong Hu; Michael D Abràmoff; Young H Kwon; Kyungmoo Lee; Mona K Garvin
Journal:  Invest Ophthalmol Vis Sci       Date:  2010-06-16       Impact factor: 4.799

2.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

3.  Active contours driven by local and global intensity fitting energy with application to brain MR image segmentation.

Authors:  Li Wang; Chunming Li; Quansen Sun; Deshen Xia; Chiu-Yen Kao
Journal:  Comput Med Imaging Graph       Date:  2009-05-30       Impact factor: 4.790

4.  Optical coherence tomography.

Authors:  D Huang; E A Swanson; C P Lin; J S Schuman; W G Stinson; W Chang; M R Hee; T Flotte; K Gregory; C A Puliafito
Journal:  Science       Date:  1991-11-22       Impact factor: 47.728

5.  Time domain and spectral domain optical coherence tomography in multiple sclerosis: a comparative cross-sectional study.

Authors:  Markus Bock; Alexander Ulrich Brandt; Jan Dörr; Caspar F Pfueller; Stephanie Ohlraun; Frauke Zipp; Friedemann Paul
Journal:  Mult Scler       Date:  2010-03-29       Impact factor: 6.312

6.  Cup to disc ratio by optical coherence tomography is abnormal in multiple sclerosis.

Authors:  S B Syc; C V Warner; S Saidha; S K Farrell; A Conger; E R Bisker; J Wilson; T C Frohman; E M Frohman; L J Balcer; P A Calabresi
Journal:  J Neurol Sci       Date:  2011-01-11       Impact factor: 3.181

7.  Spectral domain optical coherence tomography in glaucoma: qualitative and quantitative analysis of the optic nerve head and retinal nerve fiber layer (an AOS thesis).

Authors:  Teresa C Chen
Journal:  Trans Am Ophthalmol Soc       Date:  2009-12

8.  Automated 3-D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images.

Authors:  Mona Kathryn Garvin; Michael David Abràmoff; Xiaodong Wu; Stephen R Russell; Trudy L Burns; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2009-03-10       Impact factor: 10.048

9.  Segmentation of the optic disc in 3-D OCT scans of the optic nerve head.

Authors:  Kyungmoo Lee; Meindert Niemeijer; Mona K Garvin; Young H Kwon; Milan Sonka; Michael D Abramoff
Journal:  IEEE Trans Med Imaging       Date:  2009-09-15       Impact factor: 10.048

10.  Optic nerve head quantification in idiopathic intracranial hypertension by spectral domain OCT.

Authors:  Falko Kaufhold; Ella Maria Kadas; Christoph Schmidt; Hagen Kunte; Jan Hoffmann; Hanna Zimmermann; Timm Oberwahrenbrock; Lutz Harms; Konrad Polthier; Alexander U Brandt; Friedemann Paul
Journal:  PLoS One       Date:  2012-05-15       Impact factor: 3.240

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  1 in total

1.  Automatic Identification and Intuitive Map Representation of the Epiretinal Membrane Presence in 3D OCT Volumes.

Authors:  Sergio Baamonde; Joaquim de Moura; Jorge Novo; Pablo Charlón; Marcos Ortega
Journal:  Sensors (Basel)       Date:  2019-11-29       Impact factor: 3.576

  1 in total

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