Literature DB >> 31063878

Dynamic gene expression engineering as a tool in pathway engineering.

Xiaolin Shen1, Jia Wang1, Chenyi Li2, Qipeng Yuan1, Yajun Yan3.   

Abstract

Taking inspiration from natural dynamic regulatory mechanisms in microbes, construction of dynamic regulatory networks has recently emerged as a promising strategy for metabolic pathway engineering. Over the past years, a variety of dynamic control systems have been developed to maximize the production by balancing cell growth and product formation. Here, we review the attractive dynamic regulation tools that have been applied in biosynthetic pathway optimization. We particularly put emphasis on the recent successful implementations in pathway engineering by utilization of fermentation parameters-based, metabolites-based and quorum sensing system-based dynamic control networks, and the future challenges in extending the application of those promising dynamic regulation tools in industrial manufacturing.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2019        PMID: 31063878     DOI: 10.1016/j.copbio.2019.03.019

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  13 in total

Review 1.  Recent advances in improving metabolic robustness of microbial cell factories.

Authors:  Tian Jiang; Chenyi Li; Yuxi Teng; Ruihua Zhang; Yajun Yan
Journal:  Curr Opin Biotechnol       Date:  2020-07-16       Impact factor: 9.740

Review 2.  Protein Engineering for Improving and Diversifying Natural Product Biosynthesis.

Authors:  Chenyi Li; Ruihua Zhang; Jian Wang; Lauren Marie Wilson; Yajun Yan
Journal:  Trends Biotechnol       Date:  2020-01-15       Impact factor: 19.536

3.  Harnessing plasmid replication mechanism to enable dynamic control of gene copy in bacteria.

Authors:  Chenyi Li; Yusong Zou; Tian Jiang; Jianli Zhang; Yajun Yan
Journal:  Metab Eng       Date:  2022-01-13       Impact factor: 9.783

4.  An orthogonal metabolic framework for one-carbon utilization.

Authors:  Alexander Chou; Seung Hwan Lee; Fayin Zhu; James M Clomburg; Ramon Gonzalez
Journal:  Nat Metab       Date:  2021-10-21

Review 5.  Fine-tuning gene expression for improved biosynthesis of natural products: From transcriptional to post-translational regulation.

Authors:  Chenyi Li; Tian Jiang; Michelle Li; Yusong Zou; Yajun Yan
Journal:  Biotechnol Adv       Date:  2021-10-09       Impact factor: 14.227

6.  A CRISPRi mediated self-inducible system for dynamic regulation of TCA cycle and improvement of itaconic acid production in Escherichia coli.

Authors:  Ming Zhao; Yuting Li; Fengqing Wang; Yuhong Ren; Dongzhi Wei
Journal:  Synth Syst Biotechnol       Date:  2022-06-03

Review 7.  Biosensor-enabled pathway optimization in metabolic engineering.

Authors:  Yuxi Teng; Jianli Zhang; Tian Jiang; Yusong Zou; Xinyu Gong; Yajun Yan
Journal:  Curr Opin Biotechnol       Date:  2022-02-11       Impact factor: 10.279

8.  Design of a programmable biosensor-CRISPRi genetic circuits for dynamic and autonomous dual-control of metabolic flux in Bacillus subtilis.

Authors:  Yaokang Wu; Taichi Chen; Yanfeng Liu; Rongzhen Tian; Xueqin Lv; Jianghua Li; Guocheng Du; Jian Chen; Rodrigo Ledesma-Amaro; Long Liu
Journal:  Nucleic Acids Res       Date:  2020-01-24       Impact factor: 16.971

Review 9.  Physiological limitations and opportunities in microbial metabolic engineering.

Authors:  José Montaño López; Lisset Duran; José L Avalos
Journal:  Nat Rev Microbiol       Date:  2021-08-02       Impact factor: 60.633

10.  Exploring the Tunability and Dynamic Properties of MarR-PmarO Sensor System in Escherichia coli.

Authors:  Yusong Zou; Chenyi Li; Ruihua Zhang; Tian Jiang; Ning Liu; Jian Wang; Xianqiao Wang; Yajun Yan
Journal:  ACS Synth Biol       Date:  2021-07-28       Impact factor: 5.249

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