Literature DB >> 34341566

Physiological limitations and opportunities in microbial metabolic engineering.

José Montaño López1, Lisset Duran2, José L Avalos3,4,5,6.   

Abstract

Metabolic engineering can have a pivotal role in increasing the environmental sustainability of the transportation and chemical manufacturing sectors. The field has already developed engineered microorganisms that are currently being used in industrial-scale processes. However, it is often challenging to achieve the titres, yields and productivities required for commercial viability. The efficiency of microbial chemical production is usually dependent on the physiological traits of the host organism, which may either impose limitations on engineered biosynthetic pathways or, conversely, boost their performance. In this Review, we discuss different aspects of microbial physiology that often create obstacles for metabolic engineering, and present solutions to overcome them. We also describe various instances in which natural or engineered physiological traits in host organisms have been harnessed to benefit engineered metabolic pathways for chemical production.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34341566     DOI: 10.1038/s41579-021-00600-0

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  155 in total

Review 1.  A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: From biofuels and chemicals, to biocatalysis and bioremediation.

Authors:  Sergios A Nicolaou; Stefan M Gaida; Eleftherios T Papoutsakis
Journal:  Metab Eng       Date:  2010-03-24       Impact factor: 9.783

2.  Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance.

Authors:  Kanchana R Kildegaard; Björn M Hallström; Thomas H Blicher; Nikolaus Sonnenschein; Niels B Jensen; Svetlana Sherstyk; Scott J Harrison; Jérôme Maury; Markus J Herrgård; Agnieszka S Juncker; Jochen Forster; Jens Nielsen; Irina Borodina
Journal:  Metab Eng       Date:  2014-09-28       Impact factor: 9.783

Review 3.  Tolerance engineering in bacteria for the production of advanced biofuels and chemicals.

Authors:  Aindrila Mukhopadhyay
Journal:  Trends Microbiol       Date:  2015-05-26       Impact factor: 17.079

4.  Adaptive laboratory evolution of tolerance to dicarboxylic acids in Saccharomyces cerevisiae.

Authors:  Rui Pereira; Yongjun Wei; Elsayed Mohamed; Mohammad Radi; Carl Malina; Markus J Herrgård; Adam M Feist; Jens Nielsen; Yun Chen
Journal:  Metab Eng       Date:  2019-09-21       Impact factor: 9.783

5.  Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments.

Authors:  Eugene Fletcher; Amir Feizi; Markus M M Bisschops; Björn M Hallström; Sakda Khoomrung; Verena Siewers; Jens Nielsen
Journal:  Metab Eng       Date:  2016-11-02       Impact factor: 9.783

6.  Integrated analysis of isopentenyl pyrophosphate (IPP) toxicity in isoprenoid-producing Escherichia coli.

Authors:  Kevin W George; Mitchell G Thompson; Joonhoon Kim; Edward E K Baidoo; George Wang; Veronica Teixeira Benites; Christopher J Petzold; Leanne Jade G Chan; Suzan Yilmaz; Petri Turhanen; Paul D Adams; Jay D Keasling; Taek Soon Lee
Journal:  Metab Eng       Date:  2018-03-09       Impact factor: 9.783

7.  Biofuels. Engineering alcohol tolerance in yeast.

Authors:  Felix H Lam; Adel Ghaderi; Gerald R Fink; Gregory Stephanopoulos
Journal:  Science       Date:  2014-10-02       Impact factor: 47.728

8.  Critical Roles of the Pentose Phosphate Pathway and GLN3 in Isobutanol-Specific Tolerance in Yeast.

Authors:  Kouichi Kuroda; Sarah K Hammer; Yukio Watanabe; José Montaño López; Gerald R Fink; Gregory Stephanopoulos; Mitsuyoshi Ueda; José L Avalos
Journal:  Cell Syst       Date:  2019-11-13       Impact factor: 10.304

9.  Directed combinatorial mutagenesis of Escherichia coli for complex phenotype engineering.

Authors:  Rongming Liu; Liya Liang; Andrew D Garst; Alaksh Choudhury; Violeta Sànchez I Nogué; Gregg T Beckham; Ryan T Gill
Journal:  Metab Eng       Date:  2018-03-29       Impact factor: 9.783

10.  Genome shuffling enhances stress tolerance of Zymomonas mobilis to two inhibitors.

Authors:  Weiting Wang; Bo Wu; Han Qin; Panting Liu; Yao Qin; Guowei Duan; Guoquan Hu; Mingxiong He
Journal:  Biotechnol Biofuels       Date:  2019-12-16       Impact factor: 6.040

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  2 in total

Review 1.  Endophytism: A Multidimensional Approach to Plant-Prokaryotic Microbe Interaction.

Authors:  Simran Rani; Pradeep Kumar; Priyanka Dahiya; Rajat Maheshwari; Amita Suneja Dang; Pooja Suneja
Journal:  Front Microbiol       Date:  2022-05-12       Impact factor: 6.064

Review 2.  Integrating Human Waste with Microbial Fuel Cells to Elevate the Production of Bioelectricity.

Authors:  Chetan Pandit; Bhim Sen Thapa; Bhagyashree Srivastava; Abhilasha Singh Mathuriya; Umair-Ali Toor; Manu Pant; Soumya Pandit; Deepak-A Jadhav
Journal:  BioTech (Basel)       Date:  2022-08-22
  2 in total

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