Literature DB >> 31061761

Dictionary learning sparse-sampling reconstruction method for in-vivo 3D photoacoustic computed tomography.

Fangyan Liu1,2, Xiaojing Gong3,2, Lihong V Wang4, Jingjing Guan1, Liang Song3,5, Jing Meng1,6.   

Abstract

The sparse transforms currently used in the model-based reconstruction method for photoacoustic computed tomography (PACT) are predefined and they typically cannot capture the underlying features of the specific data sets adequately, thus limiting the high-quality recovery of photoacoustic images. In this work, we present an advanced reconstruction model using the K-VSD dictionary learning technique and present the in vivo results after adapting the model into the 3D PACT system. The in vivo experiments were performed on an IRB approved human hand and two rats. When compared to the traditional sparse transform, experimental results using our proposed method improved accuracy and contrast to noise ration of the reconstructed photoacoustic images, on average, by 3.7 and 1.8 times in the case of 50% sparse-sampling rate, respectively. We also compared the performance of our algorithm against other techniques, and imaging speed was 60% faster than other approaches. Our system would require sparse-transducer array and lower number of data acquisition hardware (DAQs) potentially reducing the cost of the system. Thus, our work provides a new way for reconstructing photoacoustic images, and it would enable the development of new high-speed low-cost 3D PACT for various biomedical applications.

Entities:  

Year:  2019        PMID: 31061761      PMCID: PMC6484974          DOI: 10.1364/BOE.10.001660

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  19 in total

1.  Compressed sensing in photoacoustic tomography in vivo.

Authors:  Zijian Guo; Changhui Li; Liang Song; Lihong V Wang
Journal:  J Biomed Opt       Date:  2010 Mar-Apr       Impact factor: 3.170

2.  Sparse MRI: The application of compressed sensing for rapid MR imaging.

Authors:  Michael Lustig; David Donoho; John M Pauly
Journal:  Magn Reson Med       Date:  2007-12       Impact factor: 4.668

3.  Fast 3-D dark-field reflection-mode photoacoustic microscopy in vivo with a 30-MHz ultrasound linear array.

Authors:  Liang Song; Konstantin Maslov; Rachel Bitton; K Kirk Shung; Lihong V Wang
Journal:  J Biomed Opt       Date:  2008 Sep-Oct       Impact factor: 3.170

4.  Photoacoustic tomography of monkey brain using virtual point ultrasonic transducers.

Authors:  Liming Nie; Zijian Guo; Lihong V Wang
Journal:  J Biomed Opt       Date:  2011-07       Impact factor: 3.170

5.  In vivo optical-resolution photoacoustic computed tomography with compressed sensing.

Authors:  Jing Meng; Lihong V Wang; Dong Liang; Liang Song
Journal:  Opt Lett       Date:  2012-11-15       Impact factor: 3.776

6.  Artifact removal in photoacoustic section imaging by combining an integrating cylindrical detector with model-based reconstruction.

Authors:  Guenther Paltauf; Robert Nuster
Journal:  J Biomed Opt       Date:  2014-02       Impact factor: 3.170

7.  Compressed sensing based virtual-detector photoacoustic microscopy in vivo.

Authors:  Jing Meng; Chengbo Liu; Jiaxiang Zheng; Riqiang Lin; Liang Song
Journal:  J Biomed Opt       Date:  2014-03       Impact factor: 3.170

Review 8.  Small-animal whole-body photoacoustic tomography: a review.

Authors:  Jun Xia; Lihong V Wang
Journal:  IEEE Trans Biomed Eng       Date:  2013-09-25       Impact factor: 4.538

9.  Photoacoustic tomography system for noninvasive real-time three-dimensional imaging of epilepsy.

Authors:  Bo Wang; Liangzhong Xiang; Max S Jiang; Jianjun Yang; Qizhi Zhang; Paul R Carney; Huabei Jiang
Journal:  Biomed Opt Express       Date:  2012-05-17       Impact factor: 3.732

10.  Dictionary learning algorithms for sparse representation.

Authors:  Kenneth Kreutz-Delgado; Joseph F Murray; Bhaskar D Rao; Kjersti Engan; Te-Won Lee; Terrence J Sejnowski
Journal:  Neural Comput       Date:  2003-02       Impact factor: 2.026

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  2 in total

1.  Dictionary learning technique enhances signal in LED-based photoacoustic imaging.

Authors:  Parastoo Farnia; Ebrahim Najafzadeh; Ali Hariri; Saeedeh Navaei Lavasani; Bahador Makkiabadi; Alireza Ahmadian; Jesse V Jokerst
Journal:  Biomed Opt Express       Date:  2020-04-14       Impact factor: 3.732

2.  Image reconstruction for endoscopic photoacoustic tomography including effects of detector responses.

Authors:  Zheng Sun; Huifeng Sun
Journal:  Exp Biol Med (Maywood)       Date:  2022-03-01
  2 in total

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