| Literature DB >> 31037068 |
Nancy Merino1,2,3, Heidi S Aronson4, Diana P Bojanova1, Jayme Feyhl-Buska1, Michael L Wong5,6, Shu Zhang7, Donato Giovannelli2,8,9,10.
Abstract
Prokaryotic life has dominated most of the evolutionary history of our planet, evolving to occupy virtually all available environmental niches. Extremophiles, especially those thriving under multiple extremes, represent a key area of research for multiple disciplines, spanning from the study of adaptations to harsh conditions, to the biogeochemical cycling of elements. Extremophile research also has implications for origin of life studies and the search for life on other planetary and celestial bodies. In this article, we will review the current state of knowledge for the biospace in which life operates on Earth and will discuss it in a planetary context, highlighting knowledge gaps and areas of opportunity.Entities:
Keywords: astrobiology; extremophiles/extremophily; habitability and astrobiology; limits of life; polyextremophiles; search for life
Year: 2019 PMID: 31037068 PMCID: PMC6476344 DOI: 10.3389/fmicb.2019.00780
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Extremophiles nomenclature and ranges.
| Low → Higha | |||||
|---|---|---|---|---|---|
| pH | Hyperacidophile | Acidophile | Neutrophile | Alkaliphile | Hyperalkaliphile |
| (<pH 3) | (<pH 5) | (pH 5–9) | (>pH 9) | (>pH 11) | |
| Temperature | Psychrophile | Mesophile | Thermophile | Hyperthermophile | |
| (<20°C) | (20–45°C) | (45–80°C) | (>80°C) | ||
| Salinityb | Non-halophile | Halotolerant | Halophile | Extreme halophile | |
| (<1.2%) | (1.2–2.9%; tolerate ≤ 14.6%) | (>8.8%) | (>14.6%, cannot grow < 8.8%) | ||
| Pressure | Piezotolerant or barotolerant | Piezophile or barophile | Hyperpiezophile or hyperbarophile | ||
| (0.1–10 MPa) | (10–50 MPa) | (>50 MPa) | |||
| Water activity | Xerophile (aw < 0.7) | ||||
| Polyextremophile | Tolerance or preference for multiple parameters combined | ||||
FIGURE 1Representative idealized cross section of Earth’s crust showing the diversity of extreme environments and their approximate location.
FIGURE 2The temperature, pressure, pH, and salinity boundaries observed for life on Earth compared to the phase space observed on planetary bodies discussed in the main text. Polygon charts are designed to represent ranges in multidimensional space. Each edge represents the range for the specific variables Single values (e.g., when min = max) are represented by a single vertex on an axis, while missing values (e.g., NA or NR) are represented by the absence of the corresponding polygon edge on the corresponding axis.
Environmental boundary conditions for different Earth ecosystems.
| Biome | Temperature | pH | Pressure | Salinity | References |
|---|---|---|---|---|---|
| (°C) | (MPa) | (% NaCl) | |||
| Soda lakes | -0.5–83 | 6.9–11.2a | nr | 0.64–37.1 | |
| Terrestrial hot springs/geothermal waters | 15–270 | 0.02–9.8 | 0.1–7.2b | 0.0002–saturation | |
| Polar environments | -98.6–24.3 | 4.6–9.6 | 0.1–35.5c | 0–40.2 | |
| Deep-sea floor and trenches | -1.9–13.8d | 7.3–8.1 | 2.1–112 | 3.4–3.9 | |
| Deep-sea hydrothermal vents | <1e–464 | 4–11 | 2.1–50.7 | 0.1–8 | |
| Deep hypersaline anoxic basins | 10–65 | 5.4–8.6 | 2.1–40.5 | 4–50f | |
| Subsurface ecosystems | 3.25–<400g | ∼1–12.8 | <800h | 0.05–saturationi | |
| Desertsj | -19.4–70 | 6.8–10 | nr | 0.02–30.8 | |
| Serpentinite-hosted systemsk | 10–365 | 2.8–12.6 | <900l | 0.03–49.68m | |
| Mine drainage | 1n–47 | -3.6–13.3 | 6–14 | 0.008–7.6 |
Limits of life as identified by (poly)extremophilic organisms in pure cultures.
| Strain | Domain | Extremophile | Isolation | Temperature | pH | Pressure | Salinity | Water | References |
|---|---|---|---|---|---|---|---|---|---|
| Type | ecosystem | (°C) | (Mpa) | (%) | activity (aw) | ||||
| Hypercidophile | Hot springs, Solfataras | 47–65 (60)a | nr | 0–20 | nr | ||||
| Alkaliphile | Serpentinizing system (water) | 18–37 (30) | 9– | nr | 0–0.5 (0) | nr | |||
| Hyperthermophile | Deep-sea hydrothermal vent | 90– | (6.3–6.6) | 0.4–40 | 0.5–4.5 (3.0) | nr | |||
| Halopsychrophile | Sea ice core | 6–11 (7–8) | nr | 0–19 (2) | nr | ||||
| Haloalkaliphile | Soda lake | 28–55 (44) | 8.7–9.8 (9.4) | nr | 20–35 ( | nr | |||
| Piezothermophile | Deep-sea hydrothermal vent | 60–95 (75) | 5.5–9 (6) | 0.1– | 2–6 (3) | nr | |||
| Haloarchaeal strains | Xerophile | Solar salterns (brine) | nr | nr | nr | nr |
Examples of notable (Poly)extremophiles and their physiological requirements.
| Strain | Domain | Extremophile | Isolation | Temperature | pH | Pressure | Salinity | References |
|---|---|---|---|---|---|---|---|---|
| type | ecosystem | (°C) | (MPa) | (%) | ||||
| Archaea | Acidothermophile | Solfatara crater | 65–96 (90) | 1–5.5 (2) | na | 0.2 (na) | ||
| Bacteria | Piezopsychrophile | Deep-sea | 4–15 (10) | 7 (na) | 40–80 (60) | na (3) | ||
| Bacteria | Hyperalkaliphile | Soda lake | 4–50 (30) | 6–12 (9.5) | na | 1.1–26.3 (8.9) | ||
| Bacteria | Alkaliphile, piezotolerant, and halotolerant | Deep-sea (mud) | 15–42 (30) | 6.5–10 (7–9.5) | 0.1–30 | 0–21 (3) | ||
| Bacteria | Alkalithermophile | Manure | 37–66 (62) | 8–10.5 (9.5) | na | <3 (na) | ||
| Bacteria | Halophile | Saline soil | 20–40 (28–32) | 5–8 (6–7) | na | 10–30 (15–25) | ||
| Bacteria | Hyperthermophile | Obsidian Pool, Yellowstone National Park | 65–100 (85) | na | na | 0 (na) | ||
| Bacteria | Piezophile | Deep-sea | 0–28 (15–20) | 6–8 (7) | 0.1–50 (20) | 1–7.2 (3–4) | ||
| Bacteria | Piezopsychrophile | Deep-sea | 2 (na) | 6.8 (na) | 51.8–103.5 (69) | na | ||
| Bacteria | Psychrophile | Tundra (soil) | 4–25 (18) | 6–9 (7) | na | 0–2 (0) | ||
| Archaea | Thermophile and radiation-tolerant | Hydrothermal vent (chimney) | 55–95 (88) | na (5.5–6.5) | na | (20) | ||
| Bacteria | Vacuum- and radiation-tolerant | Spoiled canned meat | Mars-like conditions, vacuum, UV and space radiation | |||||
| Fungi | Vacuum- and radiation-tolerant | Antarctica | Mars-like conditions, vacuum, UV and space radiation | |||||
| Bacteria | Xerotolerant | Hot spring | 30–55 (47) | 5–8 (6.5) | na | na | ||
| Archaea | Xerotolerant, vacuum- and radiation-tolerant | Bore core from a salt mine | 42 (na) | na | na | 25 | ||
Boundary conditions for different planetary bodies of astrobiological interest (compared to Earth), split into atmosphere, surface, and subsurface layers.
| Planetary | Type | Layer | Temperature | pH | Pressure | Salinity | Geochemistry | References |
|---|---|---|---|---|---|---|---|---|
| body | (°C) | (MPa) | (% NaCl) | |||||
| Earth | Planet | Atmosphere | -100 – 40 | Neutral, local acidic conditions possible due to volcanism and human activities | 0.0001–0.1 | 0 | 78% N2, 21% O2, 9340 ppm Ar, 400 ppm CO2 18.2 ppm Ne, 5.2 ppm He, 1.7 ppm CH4, 1.1 ppm Kr, 0.6 ppm H2, variable H2O | |
| Surface | -98.6 – 464 | -3.6 – 13.3 | 0.003–112 | 0–saturation | Soils and sediments of varying lithologies, siliceous crust, ranging from mafic to felsic composition. Extensive ocean (70% planet surface), with 4,000 m average depth, 4°C and 3.5% average temperature and salinity respectively | |||
| Subsurface | 3.25–<400 | ∼1–12.8 | <800 | 0.05–saturation | Soils and sediments of varying lithologies, siliceous crust, ranging from mafic to felsic composition, ultramafic mantle | |||
| Venus | Planet | Atmosphere | -40 – 482a | 0b | 0.1–9.3c | nr | 96.5% CO2, 3.5% N2; small quantities of CO, SO2, HCl, HF, HDO, and H2O; H2SO4 condensates | |
| Surface | 377–482 | nr | 4.5–9.3c | nr | Rocks are similar to tholeiitic and alkaline basalts; no liquid water | |||
| Subsurface | nr | nr | nr | nr | Fluid channels; volcanism | |||
| Mars | Planet | Atmosphere | -138 – 35d | nr | 0.0001–0.0009 | nr | 95.3% CO2, 2.7% N2, 1.6% Ar, 0.13% O2, 0.08% CO; trace amounts of H2O, NO, Ne, Kr, Xe | |
| Surface | -138 – 30 | 7.7e | 0.0004–0.0009 | 5.2–5.8 | Basaltic, Fe-/Mg-rich phyllosilicates, perchlorate salts, Al-rich clays, sulfates, chlorides, calcite, and silicas; potential cryosphere | |||
| Subsurface | 55g | 4.96–9.13h | 10–303g | Cl-rich brines | Potential groundwater; basalt crust; possible serpentinization | |||
| Enceladus | Icy moon | Plume jets | 0 | ∼8.5–9 | High velocity jets | >0.5 | 90–99% H2O, ≤0.61–4.27% N2, 0.3–5.3% CO2, 0.1–1.68% CH4, 0.4–0.9% NH3, 0.4–39% H2, trace amounts of hydrocarbons; high mass organic cations, silicates, sodium, potassium, carbonates | |
| Icy shell (∼10 km thick) | -233 – -23 | nr | nr | May have ammonia brine pockets | May have tectonics | |||
| Subsurface global ocean (∼0–170 km depth) | <90 | 8.5–12.2k | 1–8 | 0.45–<4 | Possible serpentinization | |||
| Titan | Icy moon | Atmosphere | -183 – -73j | nr | >0.01–0.15 | nr | 98.4% N2, 1.4% CH4, 0.2% H2, trace hydrocarbons and organics; ∼50 ppmv CO and ∼15 ppbv CO2; HCN, C2H3CN, and other nitriles; hazes and clouds | |
| Surface | -183 – -179 | nr | 0.15–0.35i | nr | 95% N2, 5% CH4, 0.1% H2; lakes and sea have CH4, C2H4, and dissolved nitrogen; dunes of solid organic material; low-latitude deserts and high-latitude moist climates | |||
| Subsurface | -18 | 11.8l | 50–300m | Likely dense subsurface ocean (≤1,350 kg m-3) suggesting high salinity | CH4 and C2H6 | |||
| Ceres | Dwarf planet | Atmosphere | nr | nr | nr | nr | Transient atmosphere with possible water vapor | |
| Surface | (-157 – -30)n | 9.7–11.3n | nr | <10n | Surface clays; (Mg, Ca)-carbonates; (Mg, NH4)-phyllosilicates; Fe-rich clays; salt deposits; chloride salts; water-rock interactions; brucite and magnetite; sulfur species and graphitized carbon; localized Na-carbonates (e.g., Na2CO3), NH4Cl, NH4HCO3 | |||
| Subsurface | -143 – -93° | Likely alkaline | <140–200p | Potentially has briny or NH3-rich subsurface liquid | Active water/ice-driven subsurface processes | |||
| Europa | Icy moon | Atmosphere (tenuous) | nr | nr | 0.1-12–1-12 | nr | Ion sputtering of the surface; potential water plumes; O2; trace amounts of sodium and potassium | |
| Surface (icy shell) | -187 – -141 | nr | 0.1-12 | May be saline, as delivered to the surface from a salty ocean, may have brine or salt inclusions | H2O2, H2SO4, CO2; salts concentrated in cracks; oxidants and simple organics; potentially MgSO4, Na2SO4, Na2CO3, may have gas inclusions; may have tectonics | |||
| Subsurface ocean | Daily inundation of seawater at | Potential for wide rangeq | 0.1–30r | <3.5 | Likely contains Mg2+, SO42-, Na+, Cl-; oxidants and simple organics |