Literature DB >> 31463573

Extremophilic models for astrobiology: haloarchaeal survival strategies and pigments for remote sensing.

Shiladitya DasSarma1, Priya DasSarma2, Victoria J Laye2, Edward W Schwieterman3.   

Abstract

Recent progress in extremophile biology, exploration of planetary bodies in the solar system, and the detection and characterization of extrasolar planets are leading to new insights in the field of astrobiology and possible distribution of life in the universe. Among the many extremophiles on Earth, the halophilic Archaea (Haloarchaea) are especially attractive models for astrobiology, being evolutionarily ancient and physiologically versatile, potentially surviving in a variety of planetary environments and with relevance for in situ life detection. Haloarchaea are polyextremophilic with tolerance of saturating salinity, anaerobic conditions, high levels of ultraviolet and ionizing radiation, subzero temperatures, desiccation, and toxic ions. Haloarchaea survive launches into Earth's stratosphere encountering conditions similar to those found on the surface of Mars. Studies of their unique proteins are revealing mechanisms permitting activity and function in high ionic strength, perchlorates, and subzero temperatures. Haloarchaea also produce spectacular blooms visible from space due to synthesis of red-orange isoprenoid carotenoids used for photoprotection and photorepair processes and purple retinal chromoproteins for phototrophy and phototaxis. Remote sensing using visible and infrared spectroscopy has shown that haloarchaeal pigments exhibit both a discernable peak of absorption and a reflective "green edge". Since the pigments produce remotely detectable features, they may influence the spectrum from an inhabited exoplanet imaged by a future large space-based telescope. In this review, we focus primarily on studies of two Haloarchaea, Halobacterium sp. NRC-1 and Halorubrum lacusprofundi.

Entities:  

Keywords:  Astrobiology; Biosignature; Haloarchaea; Phototrophy; Polyextremophile; Purple membrane; Retinal

Mesh:

Year:  2019        PMID: 31463573      PMCID: PMC6954306          DOI: 10.1007/s00792-019-01126-3

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  66 in total

1.  brp and blh are required for synthesis of the retinal cofactor of bacteriorhodopsin in Halobacterium salinarum.

Authors:  R F Peck; C Echavarri-Erasun; E A Johnson; W V Ng; S P Kennedy; L Hood; S DasSarma; M P Krebs
Journal:  J Biol Chem       Date:  2000-11-22       Impact factor: 5.157

2.  Conserved enzymes mediate the early reactions of carotenoid biosynthesis in nonphotosynthetic and photosynthetic prokaryotes.

Authors:  G A Armstrong; M Alberti; J E Hearst
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12       Impact factor: 11.205

3.  Extremely radiation-resistant mutants of a halophilic archaeon with increased single-stranded DNA-binding protein (RPA) gene expression.

Authors:  Linda C DeVeaux; Jochen A Müller; Jonathon Smith; Jill Petrisko; Douglas P Wells; Shiladitya DasSarma
Journal:  Radiat Res       Date:  2007-10       Impact factor: 2.841

4.  Advances in exoplanet science from Kepler.

Authors:  Jack J Lissauer; Rebekah I Dawson; Scott Tremaine
Journal:  Nature       Date:  2014-09-18       Impact factor: 49.962

5.  Biosynthesis of the purple membrane of halobacteria.

Authors:  M Sumper; H Reitmeier; D Oesterhelt
Journal:  Angew Chem Int Ed Engl       Date:  1976-04       Impact factor: 15.336

6.  Analysis of acidic surface of Haloferax mediterranei glucose dehydrogenase by site-directed mutagenesis.

Authors:  J Esclapez; C Pire; V Bautista; R M Martínez-Espinosa; J Ferrer; M J Bonete
Journal:  FEBS Lett       Date:  2007-02-02       Impact factor: 4.124

7.  Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome?

Authors:  W V Ng; S A Ciufo; T M Smith; R E Bumgarner; D Baskin; J Faust; B Hall; C Loretz; J Seto; J Slagel; L Hood; S DasSarma
Journal:  Genome Res       Date:  1998-11       Impact factor: 9.043

8.  Arsenic resistance in Halobacterium sp. strain NRC-1 examined by using an improved gene knockout system.

Authors:  Gejiao Wang; Sean P Kennedy; Sabeena Fasiludeen; Christopher Rensing; Shiladitya DasSarma
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

9.  The core and unique proteins of haloarchaea.

Authors:  Melinda D Capes; Priya DasSarma; Shiladitya DasSarma
Journal:  BMC Genomics       Date:  2012-01-24       Impact factor: 3.969

10.  Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis.

Authors:  Dimitry Y Sorokin; Kira S Makarova; Ben Abbas; Manuel Ferrer; Peter N Golyshin; Erwin A Galinski; Sergio Ciordia; María Carmen Mena; Alexander Y Merkel; Yuri I Wolf; Mark C M van Loosdrecht; Eugene V Koonin
Journal:  Nat Microbiol       Date:  2017-05-30       Impact factor: 17.745

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  13 in total

1.  Genome Sequence and Methylation Pattern of Haloterrigena salifodinae BOL5-1, an Extremely Halophilic Archaeon from a Bolivian Salt Mine.

Authors:  Priya DasSarma; Brian P Anton; Satyajit L DasSarma; Hedvig A L von Ehrenheim; Fabiana L Martinez; Daniel Guzmán; Richard J Roberts; Shiladitya DasSarma
Journal:  Microbiol Resour Announc       Date:  2021-05-06

2.  16S rRNA Gene Diversity in the Salt Crust of Salar de Uyuni, Bolivia, the World's Largest Salt Flat.

Authors:  Wolf T Pecher; Fabiana L Martínez; Priya DasSarma; Daniel Guzmán; Shiladitya DasSarma
Journal:  Microbiol Resour Announc       Date:  2020-05-21

3.  16S rRNA Gene Diversity in Ancient Gray and Pink Salt from San Simón Salt Mines in Tarija, Bolivia.

Authors:  Wolf T Pecher; Fabiana L Martínez; Priya DasSarma; Daniel Guzmán; Shiladitya DasSarma
Journal:  Microbiol Resour Announc       Date:  2020-10-08

4.  Haloferax mediterranei Cells as C50 Carotenoid Factories.

Authors:  Micaela Giani; Zaida Montero-Lobato; Inés Garbayo; Carlos Vílchez; José M Vega; Rosa María Martínez-Espinosa
Journal:  Mar Drugs       Date:  2021-02-10       Impact factor: 5.118

5.  Genome Sequence of the Early 20th-Century Extreme Halophile Halobacterium sp. Strain NRC-34001.

Authors:  Priya DasSarma; Brian P Anton; Jessie M Griffith; Karina S Kunka; Richard J Roberts; Shiladitya DasSarma
Journal:  Microbiol Resour Announc       Date:  2022-01-13

Review 6.  The Methods of Digging for "Gold" within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools.

Authors:  Jakub Lach; Paulina Jęcz; Dominik Strapagiel; Agnieszka Matera-Witkiewicz; Paweł Stączek
Journal:  Genes (Basel)       Date:  2021-11-01       Impact factor: 4.096

7.  Assessment of 16S rRNA Gene-Based Phylogenetic Diversity of Archaeal Communities in Halite-Crystal Salts Processed from Natural Saharan Saline Systems of Southern Tunisia.

Authors:  Afef Najjari; Panagiota Stathopoulou; Khaled Elmnasri; Faten Hasnaoui; Ines Zidi; Haitham Sghaier; Hadda Imene Ouzari; Ameur Cherif; George Tsiamis
Journal:  Biology (Basel)       Date:  2021-05-04

Review 8.  Microorganisms and Their Metabolic Capabilities in the Context of the Biogeochemical Nitrogen Cycle at Extreme Environments.

Authors:  Rosa María Martínez-Espinosa
Journal:  Int J Mol Sci       Date:  2020-06-13       Impact factor: 5.923

9.  Mars Extant Life: What's Next? Conference Report.

Authors:  B L Carrier; D W Beaty; M A Meyer; J G Blank; L Chou; S DasSarma; D J Des Marais; J L Eigenbrode; N Grefenstette; N L Lanza; A C Schuerger; P Schwendner; H D Smith; C R Stoker; J D Tarnas; K D Webster; C Bakermans; B K Baxter; M S Bell; S A Benner; H H Bolivar Torres; P J Boston; R Bruner; B C Clark; P DasSarma; A E Engelhart; Z E Gallegos; Z K Garvin; P J Gasda; J H Green; R L Harris; M E Hoffman; T Kieft; A H D Koeppel; P A Lee; X Li; K L Lynch; R Mackelprang; P R Mahaffy; L H Matthies; M A Nellessen; H E Newsom; D E Northup; B R W O'Connor; S M Perl; R C Quinn; L A Rowe; B Sauterey; M A Schneegurt; D Schulze-Makuch; L A Scuderi; M N Spilde; V Stamenković; J A Torres Celis; D Viola; B D Wade; C J Walker; R C Wiens; A J Williams; J M Williams; J Xu
Journal:  Astrobiology       Date:  2020-05-28       Impact factor: 4.335

Review 10.  Recent advances in understanding extremophiles.

Authors:  James A Coker
Journal:  F1000Res       Date:  2019-11-13
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