Literature DB >> 31034310

A Perspective on Extreme Open Science: Companies Sharing Compounds without Restriction.

David H Drewry1, Carrow I Wells1, William J Zuercher1, Timothy M Willson1.   

Abstract

Although the human genome provides the blueprint for life, most of the proteins it encodes remain poorly studied. This perspective describes how one group of scientists, in seeking new targets for drug discovery, used open science through unrestricted sharing of small molecules to shed light on dark matter of the genome. Starting initially with a single pharmaceutical company before expanding to multiple companies, a precedent was established for sharing published kinase inhibitors as chemical tools. The integration of open science and kinase chemogenomics has supported the study of many new potential drug targets by the scientific community.

Entities:  

Keywords:  compound repositories; kinases; medicinal chemistry; phenotypic drug discovery

Mesh:

Substances:

Year:  2019        PMID: 31034310      PMCID: PMC6624833          DOI: 10.1177/2472555219838210

Source DB:  PubMed          Journal:  SLAS Discov        ISSN: 2472-5552            Impact factor:   3.341


  23 in total

Review 1.  Chemogenomic approaches to drug discovery.

Authors:  P R Caron; M D Mullican; R D Mashal; K P Wilson; M S Su; M A Murcko
Journal:  Curr Opin Chem Biol       Date:  2001-08       Impact factor: 8.822

Review 2.  Chemogenomic approaches to rational drug design.

Authors:  D Rognan
Journal:  Br J Pharmacol       Date:  2007-05-29       Impact factor: 8.739

3.  The (un)targeted cancer kinome.

Authors:  Oleg Fedorov; Susanne Müller; Stefan Knapp
Journal:  Nat Chem Biol       Date:  2010-03       Impact factor: 15.040

Review 4.  Applications of chemogenomic library screening in drug discovery.

Authors:  Lyn H Jones; Mark E Bunnage
Journal:  Nat Rev Drug Discov       Date:  2017-01-20       Impact factor: 84.694

5.  Target validation using chemical probes.

Authors:  Mark E Bunnage; Eugene L Piatnitski Chekler; Lyn H Jones
Journal:  Nat Chem Biol       Date:  2013-04       Impact factor: 15.040

6.  Thousands of chemical starting points for antimalarial lead identification.

Authors:  Francisco-Javier Gamo; Laura M Sanz; Jaume Vidal; Cristina de Cozar; Emilio Alvarez; Jose-Luis Lavandera; Dana E Vanderwall; Darren V S Green; Vinod Kumar; Samiul Hasan; James R Brown; Catherine E Peishoff; Lon R Cardon; Jose F Garcia-Bustos
Journal:  Nature       Date:  2010-05-20       Impact factor: 49.962

7.  Rational Polypharmacology: Systematically Identifying and Engaging Multiple Drug Targets To Promote Axon Growth.

Authors:  Hassan Al-Ali; Do-Hun Lee; Matt C Danzi; Houssam Nassif; Prson Gautam; Krister Wennerberg; Bill Zuercher; David H Drewry; Jae K Lee; Vance P Lemmon; John L Bixby
Journal:  ACS Chem Biol       Date:  2015-06-24       Impact factor: 5.100

8.  The druggable genome and support for target identification and validation in drug development.

Authors:  Chris Finan; Anna Gaulton; Felix A Kruger; R Thomas Lumbers; Tina Shah; Jorgen Engmann; Luana Galver; Ryan Kelley; Anneli Karlsson; Rita Santos; John P Overington; Aroon D Hingorani; Juan P Casas
Journal:  Sci Transl Med       Date:  2017-03-29       Impact factor: 17.956

9.  How open science helps researchers succeed.

Authors:  Erin C McKiernan; Philip E Bourne; C Titus Brown; Stuart Buck; Amye Kenall; Jennifer Lin; Damon McDougall; Brian A Nosek; Karthik Ram; Courtney K Soderberg; Jeffrey R Spies; Kaitlin Thaney; Andrew Updegrove; Kara H Woo; Tal Yarkoni
Journal:  Elife       Date:  2016-07-07       Impact factor: 8.140

Review 10.  Seeding collaborations to advance kinase science with the GSK Published Kinase Inhibitor Set (PKIS).

Authors:  David H Drewry; Timothy M Willson; William J Zuercher
Journal:  Curr Top Med Chem       Date:  2014       Impact factor: 3.295

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  5 in total

1.  A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.

Authors:  Alfredo Picado; Apirat Chaikuad; Carrow I Wells; Safal Shrestha; William J Zuercher; Julie E Pickett; Frank E Kwarcinski; Parvathi Sinha; Chandi S de Silva; Reena Zutshi; Shubin Liu; Natarajan Kannan; Stefan Knapp; David H Drewry; Timothy M Willson
Journal:  J Med Chem       Date:  2020-11-20       Impact factor: 7.446

2.  Use of AD Informer Set compounds to explore validity of novel targets in Alzheimer's disease pathology.

Authors:  Frances M Potjewyd; Joel K Annor-Gyamfi; Jeffrey Aubé; Shaoyou Chu; Ivie L Conlon; Kevin J Frankowski; Shiva K R Guduru; Brian P Hardy; Megan D Hopkins; Chizuru Kinoshita; Dmitri B Kireev; Emily R Mason; Charles T Moerk; Felix Nwogbo; Kenneth H Pearce; Timothy I Richardson; David A Rogers; Disha M Soni; Michael Stashko; Xiaodong Wang; Carrow Wells; Timothy M Willson; Stephen V Frye; Jessica E Young; Alison D Axtman
Journal:  Alzheimers Dement (N Y)       Date:  2022-04-12

3.  AD Informer Set: Chemical tools to facilitate Alzheimer's disease drug discovery.

Authors:  Frances M Potjewyd; Joel K Annor-Gyamfi; Jeffrey Aubé; Shaoyou Chu; Ivie L Conlon; Kevin J Frankowski; Shiva K R Guduru; Brian P Hardy; Megan D Hopkins; Chizuru Kinoshita; Dmitri B Kireev; Emily R Mason; Charles T Moerk; Felix Nwogbo; Kenneth H Pearce; Timothy I Richardson; David A Rogers; Disha M Soni; Michael Stashko; Xiaodong Wang; Carrow Wells; Timothy M Willson; Stephen V Frye; Jessica E Young; Alison D Axtman
Journal:  Alzheimers Dement (N Y)       Date:  2022-04-20

4.  PKIS deep dive yields a chemical starting point for dark kinases and a cell active BRSK2 inhibitor.

Authors:  Tigist Y Tamir; David H Drewry; Carrow Wells; M Ben Major; Alison D Axtman
Journal:  Sci Rep       Date:  2020-09-28       Impact factor: 4.379

5.  HighVia-A Flexible Live-Cell High-Content Screening Pipeline to Assess Cellular Toxicity.

Authors:  Alison Howarth; Martin Schröder; Raquel C Montenegro; David H Drewry; Heba Sailem; Val Millar; Susanne Müller; Daniel V Ebner
Journal:  SLAS Discov       Date:  2020-05-27       Impact factor: 3.341

  5 in total

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