Literature DB >> 31011214

Disruption of endocytosis through chemical inhibition of clathrin heavy chain function.

Wim Dejonghe1,2,3, Isha Sharma1,2, Bram Denoo4, Steven De Munck5,6, Qing Lu1,2, Kiril Mishev1,2,7, Haydar Bulut8, Evelien Mylle1,2, Riet De Rycke1,2,9, Mina Vasileva10, Daniel V Savatin1,2, Wim Nerinckx11,12, An Staes11,13, Andrzej Drozdzecki14,15, Dominique Audenaert14,15, Klaas Yperman1,2, Annemieke Madder4, Jiří Friml10, Daniël Van Damme1,2, Kris Gevaert11,13, Volker Haucke16, Savvas N Savvides5,6, Johan Winne4, Eugenia Russinova17,18.   

Abstract

Clathrin-mediated endocytosis (CME) is a highly conserved and essential cellular process in eukaryotic cells, but its dynamic and vital nature makes it challenging to study using classical genetics tools. In contrast, although small molecules can acutely and reversibly perturb CME, the few chemical CME inhibitors that have been applied to plants are either ineffective or show undesirable side effects. Here, we identify the previously described endosidin9 (ES9) as an inhibitor of clathrin heavy chain (CHC) function in both Arabidopsis and human cells through affinity-based target isolation, in vitro binding studies and X-ray crystallography. Moreover, we present a chemically improved ES9 analog, ES9-17, which lacks the undesirable side effects of ES9 while retaining the ability to target CHC. ES9 and ES9-17 have expanded the chemical toolbox used to probe CHC function, and present chemical scaffolds for further design of more specific and potent CHC inhibitors across different systems.

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Year:  2019        PMID: 31011214      PMCID: PMC7612312          DOI: 10.1038/s41589-019-0262-1

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  48 in total

1.  Ikarugamycin: A Natural Product Inhibitor of Clathrin-Mediated Endocytosis.

Authors:  Sarah R Elkin; Nathaniel W Oswald; Dana K Reed; Marcel Mettlen; John B MacMillan; Sandra L Schmid
Journal:  Traffic       Date:  2016-08-08       Impact factor: 6.215

2.  ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics.

Authors:  Kenny Helsens; Niklaas Colaert; Harald Barsnes; Thilo Muth; Kristian Flikka; An Staes; Evy Timmerman; Steffi Wortelkamp; Albert Sickmann; Joël Vandekerckhove; Kris Gevaert; Lennart Martens
Journal:  Proteomics       Date:  2010-03       Impact factor: 3.984

3.  Target identification using drug affinity responsive target stability (DARTS).

Authors:  Brett Lomenick; Rui Hao; Nao Jonai; Randall M Chin; Mariam Aghajan; Sarah Warburton; Jianing Wang; Raymond P Wu; Fernando Gomez; Joseph A Loo; James A Wohlschlegel; Thomas M Vondriska; Jerry Pelletier; Harvey R Herschman; Jon Clardy; Catherine F Clarke; Jing Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-07       Impact factor: 11.205

Review 4.  Inroads into Internalization: Five Years of Endocytic Exploration.

Authors:  Gregory D Reynolds; Chao Wang; Jianwei Pan; Sebastian Y Bednarek
Journal:  Plant Physiol       Date:  2017-10-26       Impact factor: 8.340

5.  Probing plant membranes with FM dyes: tracking, dragging or blocking?

Authors:  Adriana Jelínková; Katerina Malínská; Sibu Simon; Jürgen Kleine-Vehn; Markéta Parezová; Premysl Pejchar; Martin Kubes; Jan Martinec; Jirí Friml; Eva Zazímalová; Jan Petrásek
Journal:  Plant J       Date:  2009-12-10       Impact factor: 6.417

6.  PHENIX: a comprehensive Python-based system for macromolecular structure solution.

Authors:  Paul D Adams; Pavel V Afonine; Gábor Bunkóczi; Vincent B Chen; Ian W Davis; Nathaniel Echols; Jeffrey J Headd; Li-Wei Hung; Gary J Kapral; Ralf W Grosse-Kunstleve; Airlie J McCoy; Nigel W Moriarty; Robert Oeffner; Randy J Read; David C Richardson; Jane S Richardson; Thomas C Terwilliger; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  Vacuolar H+-ATPase activity is required for endocytic and secretory trafficking in Arabidopsis.

Authors:  Jan Dettmer; Anne Hong-Hermesdorf; York-Dieter Stierhof; Karin Schumacher
Journal:  Plant Cell       Date:  2006-02-03       Impact factor: 11.277

8.  Fluorescent castasterone reveals BRI1 signaling from the plasma membrane.

Authors:  Niloufer G Irani; Simone Di Rubbo; Evelien Mylle; Jos Van den Begin; Joanna Schneider-Pizoń; Jaroslava Hniliková; Miroslav Šíša; Dieter Buyst; Josep Vilarrasa-Blasi; Anna-Mária Szatmári; Daniël Van Damme; Kiril Mishev; Mirela-Corina Codreanu; Ladislav Kohout; Miroslav Strnad; Ana I Caño-Delgado; Jiří Friml; Annemieke Madder; Eugenia Russinova
Journal:  Nat Chem Biol       Date:  2012-05-06       Impact factor: 15.040

9.  An ARF-GEF acting at the Golgi and in selective endocytosis in polarized plant cells.

Authors:  Ooi-Kock Teh; Ian Moore
Journal:  Nature       Date:  2007-07-26       Impact factor: 49.962

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  24 in total

Review 1.  Understanding nanoparticle endocytosis to improve targeting strategies in nanomedicine.

Authors:  Mauro Sousa de Almeida; Eva Susnik; Barbara Drasler; Patricia Taladriz-Blanco; Alke Petri-Fink; Barbara Rothen-Rutishauser
Journal:  Chem Soc Rev       Date:  2021-03-05       Impact factor: 54.564

2.  Differential regulation of G protein signaling in Arabidopsis through two distinct pathways that internalize AtRGS1.

Authors:  Justin M Watkins; Timothy J Ross-Elliott; Xiaoyi Shan; Fei Lou; Bernd Dreyer; Meral Tunc-Ozdemir; Haiyan Jia; Jing Yang; Celio Cabral Oliveira; Luguang Wu; Yuri Trusov; Timothy D Schwochert; Patrick Krysan; Alan M Jones
Journal:  Sci Signal       Date:  2021-08-10       Impact factor: 8.192

3.  The Arabidopsis SAC9 enzyme is enriched in a cortical population of early endosomes and restricts PI(4,5)P2 at the plasma membrane.

Authors:  Alexis Lebecq; Mehdi Doumane; Aurelie Fangain; Vincent Bayle; Jia Xuan Leong; Frédérique Rozier; Maria Del Marques-Bueno; Laia Armengot; Romain Boisseau; Mathilde Laetitia Simon; Mirita Franz-Wachtel; Boris Macek; Suayib Üstün; Yvon Jaillais; Marie-Cécile Caillaud
Journal:  Elife       Date:  2022-08-31       Impact factor: 8.713

Review 4.  Application of advances in endocytosis and membrane trafficking to drug delivery.

Authors:  Yaping Ju; Hao Guo; Maria Edman; Sarah F Hamm-Alvarez
Journal:  Adv Drug Deliv Rev       Date:  2020-08-03       Impact factor: 15.470

5.  The manifold actions of signaling peptides on subcellular dynamics of a receptor specify stomatal cell fate.

Authors:  Xingyun Qi; Akira Yoshinari; Pengfei Bai; Michal Maes; Scott M Zeng; Keiko U Torii
Journal:  Elife       Date:  2020-08-14       Impact factor: 8.140

6.  A Mechanistic Understanding of Monoclonal Antibody Interfacial Protection by Hydrolytically Degraded Polysorbate 20 and 80 under IV Bag Conditions.

Authors:  Aadithya Kannan; Jamie Giddings; Shrenik Mehta; Tiffany Lin; Anthony Tomlinson; Kyle Ritchie; Ian Shieh; Miguel Saggu; Nidhi Doshi
Journal:  Pharm Res       Date:  2022-03-11       Impact factor: 4.200

7.  Fluorescence intensity fluctuation analysis of receptor oligomerization in membrane domains.

Authors:  Gabriel Biener; Michael R Stoneman; Valerică Raicu
Journal:  Biophys J       Date:  2021-06-30       Impact factor: 3.699

8.  High Temporal Resolution Reveals Simultaneous Plasma Membrane Recruitment of TPLATE Complex Subunits.

Authors:  Jie Wang; Evelien Mylle; Alexander Johnson; Nienke Besbrugge; Geert De Jaeger; Jiří Friml; Roman Pleskot; Daniel Van Damme
Journal:  Plant Physiol       Date:  2020-04-22       Impact factor: 8.005

9.  Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters.

Authors:  Xixi Zhang; Maciek Adamowski; Petra Marhava; Shutang Tan; Yuzhou Zhang; Lesia Rodriguez; Marta Zwiewka; Vendula Pukyšová; Adrià Sans Sánchez; Vivek Kumar Raxwal; Christian S Hardtke; Tomasz Nodzyński; Jiří Friml
Journal:  Plant Cell       Date:  2020-03-19       Impact factor: 12.085

Review 10.  The Beginning of the End: Initial Steps in the Degradation of Plasma Membrane Proteins.

Authors:  Maximilian Schwihla; Barbara Korbei
Journal:  Front Plant Sci       Date:  2020-05-21       Impact factor: 5.753

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