Literature DB >> 31005419

TAF5L and TAF6L Maintain Self-Renewal of Embryonic Stem Cells via the MYC Regulatory Network.

Davide Seruggia1, Martin Oti2, Pratibha Tripathi2, Matthew C Canver1, Lucy LeBlanc3, Dafne C Di Giammartino4, Michael J Bullen2, Christian M Nefzger5, Yu Bo Yang Sun5, Rick Farouni6, Jose M Polo5, Luca Pinello6, Effie Apostolou4, Jonghwan Kim3, Stuart H Orkin7, Partha Pratim Das8.   

Abstract

Self-renewal and pluripotency of the embryonic stem cell (ESC) state are established and maintained by multiple regulatory networks that comprise transcription factors and epigenetic regulators. While much has been learned regarding transcription factors, the function of epigenetic regulators in these networks is less well defined. We conducted a CRISPR-Cas9-mediated loss-of-function genetic screen that identified two epigenetic regulators, TAF5L and TAF6L, components or co-activators of the GNAT-HAT complexes for the mouse ESC (mESC) state. Detailed molecular studies demonstrate that TAF5L/TAF6L transcriptionally activate c-Myc and Oct4 and their corresponding MYC and CORE regulatory networks. Besides, TAF5L/TAF6L predominantly regulate their target genes through H3K9ac deposition and c-MYC recruitment that eventually activate the MYC regulatory network for self-renewal of mESCs. Thus, our findings uncover a role of TAF5L/TAF6L in directing the MYC regulatory network that orchestrates gene expression programs to control self-renewal for the maintenance of mESC state.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CRISPR; ESC; MYC; OCT4; TAF5L; TAF6L

Mesh:

Substances:

Year:  2019        PMID: 31005419      PMCID: PMC6671628          DOI: 10.1016/j.molcel.2019.03.025

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  67 in total

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2.  Polycomb complexes repress developmental regulators in murine embryonic stem cells.

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3.  Use of in vivo biotinylation to study protein-protein and protein-DNA interactions in mouse embryonic stem cells.

Authors:  Jonghwan Kim; Alan B Cantor; Stuart H Orkin; Jianlong Wang
Journal:  Nat Protoc       Date:  2009-03-26       Impact factor: 13.491

Review 4.  Roles for MYC in the establishment and maintenance of pluripotency.

Authors:  James Chappell; Stephen Dalton
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5.  Smad3 deficiency protects mice from obesity-induced podocyte injury that precedes insulin resistance.

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Review 6.  The cell cycle and Myc intersect with mechanisms that regulate pluripotency and reprogramming.

Authors:  Amar M Singh; Stephen Dalton
Journal:  Cell Stem Cell       Date:  2009-08-07       Impact factor: 24.633

7.  A reprogrammable mouse strain from gene-targeted embryonic stem cells.

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Journal:  Nat Methods       Date:  2009-12-13       Impact factor: 28.547

Review 8.  Myc's broad reach.

Authors:  Martin Eilers; Robert N Eisenman
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Review 9.  Multiple Roles of MYC in Integrating Regulatory Networks of Pluripotent Stem Cells.

Authors:  Luca Fagnocchi; Alessio Zippo
Journal:  Front Cell Dev Biol       Date:  2017-02-03

10.  An encyclopedia of mouse DNA elements (Mouse ENCODE).

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Journal:  Genome Biol       Date:  2012-08-13       Impact factor: 13.583

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  15 in total

1.  Transcriptional Activation of MYC-Induced Genes by GCN5 Promotes B-cell Lymphomagenesis.

Authors:  Aimee T Farria; Joshua B Plummer; Andrew P Salinger; Jianjun Shen; Kevin Lin; Yue Lu; Kevin M McBride; Evangelia Koutelou; Sharon Y R Dent
Journal:  Cancer Res       Date:  2020-11-09       Impact factor: 12.701

2.  Arid4b is critical for mouse embryonic stem cell differentiation towards mesoderm and endoderm, linking epigenetics to pluripotency exit.

Authors:  Nihal Terzi Cizmecioglu; Jialiang Huang; Ezgi G Keskin; Xiaofeng Wang; Idil Esen; Fei Chen; Stuart H Orkin
Journal:  J Biol Chem       Date:  2020-10-15       Impact factor: 5.157

Review 3.  Decoding pluripotency: Genetic screens to interrogate the acquisition, maintenance, and exit of pluripotency.

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Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2019-08-13

Review 4.  Technologies and Computational Analysis Strategies for CRISPR Applications.

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Journal:  Mol Cell       Date:  2020-07-02       Impact factor: 17.970

Review 5.  Targeting the SAGA and ATAC Transcriptional Coactivator Complexes in MYC-Driven Cancers.

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Journal:  Cancer Res       Date:  2020-02-24       Impact factor: 12.701

6.  A saturating mutagenesis CRISPR-Cas9-mediated functional genomic screen identifies cis- and trans-regulatory elements of Oct4 in murine ESCs.

Authors:  Matthew C Canver; Pratibha Tripathi; Michael J Bullen; Moshe Olshansky; Yogesh Kumar; Lee H Wong; Stephen J Turner; Samuel Lessard; Luca Pinello; Stuart H Orkin; Partha Pratim Das
Journal:  J Biol Chem       Date:  2020-09-29       Impact factor: 5.157

7.  ARID4B is critical for mouse embryonic stem cell differentiation towards mesoderm and endoderm, linking epigenetics to pluripotency exit.

Authors:  Nihal Terzi Cizmecioglu; Jialiang Huang; Ezgi G Keskin; Xiaofeng Wang; Idil Esen; Fei Chen; Stuart H Orkin
Journal:  J Biol Chem       Date:  2020-12-18       Impact factor: 5.157

8.  scMAGeCK links genotypes with multiple phenotypes in single-cell CRISPR screens.

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Journal:  Genome Biol       Date:  2020-01-24       Impact factor: 13.583

9.  Loss of Kat2a enhances transcriptional noise and depletes acute myeloid leukemia stem-like cells.

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Journal:  Elife       Date:  2020-01-27       Impact factor: 8.140

10.  Identification of Potential Gene and MicroRNA Biomarkers of Acute Kidney Injury.

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Journal:  Biomed Res Int       Date:  2021-01-08       Impact factor: 3.411

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