Literature DB >> 31002174

Epigenetic dynamics during flowering plant reproduction: evidence for reprogramming?

Mary Gehring1,2.   

Abstract

Over the last 10 yr there have been major advances in documenting and understanding dynamic changes to DNA methylation, small RNAs, chromatin modifications and chromatin structure that accompany reproductive development in flowering plants, from germline specification to seed maturation. Here I highlight recent advances in the field, mostly made possible by microscopic analysis of epigenetic states or by the ability to isolate specific cell types or tissues and apply omics approaches. I consider in which contexts there is potentially reprogramming vs maintenance or reinforcement of epigenetic states.
© 2019 The Author. New Phytologist © 2019 New Phytologist Trust.

Entities:  

Keywords:  DNA methylation; embryo; endosperm; epigenetic reprogramming; female gametophyte; plant reproduction; pollen

Year:  2019        PMID: 31002174      PMCID: PMC6711810          DOI: 10.1111/nph.15856

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  46 in total

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Authors:  P R V Satyaki; Mary Gehring
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2.  Silencing in sperm cells is directed by RNA movement from the surrounding nurse cell.

Authors:  Germán Martínez; Kaushik Panda; Claudia Köhler; R Keith Slotkin
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3.  Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type-specific transcription factor networks.

Authors:  Paja Sijacic; Marko Bajic; Elizabeth C McKinney; Richard B Meagher; Roger B Deal
Journal:  Plant J       Date:  2018-04       Impact factor: 6.417

4.  Transgenerational epigenetic instability is a source of novel methylation variants.

Authors:  Robert J Schmitz; Matthew D Schultz; Mathew G Lewsey; Ronan C O'Malley; Mark A Urich; Ondrej Libiger; Nicholas J Schork; Joseph R Ecker
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5.  Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein.

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6.  DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns.

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Journal:  EMBO J       Date:  2012-05-11       Impact factor: 11.598

Review 7.  Pioneer transcription factors, chromatin dynamics, and cell fate control.

Authors:  Kenneth S Zaret; Susan E Mango
Journal:  Curr Opin Genet Dev       Date:  2016-01-27       Impact factor: 5.578

8.  Resetting of FLOWERING LOCUS C expression after epigenetic repression by vernalization.

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Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-04       Impact factor: 11.205

9.  Non-canonical RNA-directed DNA methylation participates in maternal and environmental control of seed dormancy.

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Journal:  Elife       Date:  2019-03-26       Impact factor: 8.140

10.  Similarity between soybean and Arabidopsis seed methylomes and loss of non-CG methylation does not affect seed development.

Authors:  Jer-Young Lin; Brandon H Le; Min Chen; Kelli F Henry; Jungim Hur; Tzung-Fu Hsieh; Pao-Yang Chen; Julie M Pelletier; Matteo Pellegrini; Robert L Fischer; John J Harada; Robert B Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-23       Impact factor: 11.205

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  23 in total

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Journal:  Front Plant Sci       Date:  2020-07-03       Impact factor: 5.753

2.  Cell type-specific genome scans of DNA methylation divergence indicate an important role for transposable elements.

Authors:  Önder Kartal; Marc W Schmid; Ueli Grossniklaus
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3.  Genome-wide redistribution of 24-nt siRNAs in rice gametes.

Authors:  Chenxin Li; Hengping Xu; Fang-Fang Fu; Scott D Russell; Venkatesan Sundaresan; Jonathan I Gent
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4.  Epigenetic silencing of clustered tRNA genes in Arabidopsis.

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5.  Mimulus sRNAs Are Wound Responsive and Associated with Transgenerationally Plastic Genes but Rarely Both.

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Journal:  Int J Mol Sci       Date:  2020-10-13       Impact factor: 5.923

Review 6.  Dynamics of DNA Methylation and Its Functions in Plant Growth and Development.

Authors:  Suresh Kumar; Trilochan Mohapatra
Journal:  Front Plant Sci       Date:  2021-05-21       Impact factor: 5.753

Review 7.  From Single Cell to Plants: Mesophyll Protoplasts as a Versatile System for Investigating Plant Cell Reprogramming.

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Review 8.  Controlling Apomixis: Shared Features and Distinct Characteristics of Gene Regulation.

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9.  AlphaBeta: computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants.

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10.  Current research frontiers in plant epigenetics: an introduction to a Virtual Issue.

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