Literature DB >> 28118754

DNA methylation and imprinting in plants: machinery and mechanisms.

P R V Satyaki1, Mary Gehring1,2.   

Abstract

Imprinting is an epigenetic phenomenon in which genes are expressed selectively from either the maternal or paternal alleles. In plants, imprinted gene expression is found in a tissue called the endosperm. Imprinting is often set by a unique epigenomic configuration in which the maternal chromosomes are less DNA methylated than their paternal counterparts. In this review, we synthesize studies that paint a detailed molecular portrait of the distinctive endosperm methylome. We will also discuss the molecular machinery that shapes and modifies this methylome, and the role of DNA methylation in imprinting.

Keywords:  DNA methylation; Gene imprinting; endosperm; plants; seeds

Mesh:

Substances:

Year:  2017        PMID: 28118754     DOI: 10.1080/10409238.2017.1279119

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  27 in total

1.  Regulation of Parent-of-Origin Allelic Expression in the Endosperm.

Authors:  Karina S Hornslien; Jason R Miller; Paul E Grini
Journal:  Plant Physiol       Date:  2019-05-07       Impact factor: 8.340

2.  Loss of RNA-Directed DNA Methylation in Maize Chromomethylase and DDM1-Type Nucleosome Remodeler Mutants.

Authors:  Fang-Fang Fu; R Kelly Dawe; Jonathan I Gent
Journal:  Plant Cell       Date:  2018-06-08       Impact factor: 11.277

3.  Father Knows Best? Small RNA Pathway Controls Endosperm Response to Paternal Genomic Dosage.

Authors:  Rachel Shahan
Journal:  Plant Cell       Date:  2019-05-10       Impact factor: 11.277

4.  Effect of dC → d(m5C) substitutions on the folding of intramolecular triplexes with mixed TAT and C+GC base triplets.

Authors:  Carolyn E Carr; Rajkumar Ganugula; Ronald Shikiya; Ana Maria Soto; Luis A Marky
Journal:  Biochimie       Date:  2017-12-24       Impact factor: 4.079

Review 5.  DNA Methylation: Shared and Divergent Features across Eukaryotes.

Authors:  Robert J Schmitz; Zachary A Lewis; Mary G Goll
Journal:  Trends Genet       Date:  2019-08-06       Impact factor: 11.639

Review 6.  Epigenetic dynamics during flowering plant reproduction: evidence for reprogramming?

Authors:  Mary Gehring
Journal:  New Phytol       Date:  2019-05-11       Impact factor: 10.151

7.  Paternally Acting Canonical RNA-Directed DNA Methylation Pathway Genes Sensitize Arabidopsis Endosperm to Paternal Genome Dosage.

Authors:  Prasad R V Satyaki; Mary Gehring
Journal:  Plant Cell       Date:  2019-05-07       Impact factor: 11.277

Review 8.  Old cogs, new tricks: the evolution of gene expression in a chromatin context.

Authors:  Paul B Talbert; Michael P Meers; Steven Henikoff
Journal:  Nat Rev Genet       Date:  2019-05       Impact factor: 53.242

9.  INT-Hi-C reveals distinct chromatin architecture in endosperm and leaf tissues of Arabidopsis.

Authors:  Vikash Kumar Yadav; Juan Santos-González; Claudia Köhler
Journal:  Nucleic Acids Res       Date:  2021-05-07       Impact factor: 16.971

10.  Ubiquitin-Specific-Processing Protease 7 Regulates Female Germline Stem Cell Self-Renewal Through DNA Methylation.

Authors:  Yongqiang Zhao; Xiaoyong Li; Geng Tian; Xinyan Zhao; Jiemin Wong; Yue Shen; Ji Wu
Journal:  Stem Cell Rev Rep       Date:  2020-11-05       Impact factor: 5.739

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